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The map label for this gene is ntaR [H]

Identifier: 116695661

GI number: 116695661

Start: 1959594

End: 1960286

Strand: Direct

Name: ntaR [H]

Synonym: H16_B1722

Alternate gene names: 116695661

Gene position: 1959594-1960286 (Clockwise)

Preceding gene: 116695660

Following gene: 116695664

Centisome position: 67.28

GC content: 68.54

Gene sequence:

>693_bases
ATGATTTCTCAAGAGTTCGCCGGCGCCGCCGAGAGTGGCCAGGCCGCATCGCTCCCGCGCTCGGAGCGCGCCTACCAGCA
ACTGCGCGCCGCCATCCAGGCCGGCCAGCTGCCCCCCGGCACGCGGCTGCGCGAGGTGGAACTGGCCGAATCCCTGGGCC
TGTCGCGCACGCCGGTGCGTGAAGCGCTGTCGCGGCTGGAGTCCGAAGGGCTGGTCGTCAACGAGCCCAACCGCGGCATG
ATGGTCACCCAGCTCGACGCCAGCATGGTCAGCGAGCTGTACGTCATGCGCGAAGTGCTGGAAGGCACCGCCGCCGCGCT
GGCCGCGCGCCATGCCACCGACGTGGAGATCTCGCTTCTGCGCGATATCGTCGAGCGCGACCTGGCCATCGCCGACGACC
CCGACCGGCTCGCGCTGAACAACCGGCTGTTCCACGAAACCCTGCACCGCTGCGCCCACAACCGCTACCTGCTGAAGACG
CTGCGCTCGCTGCATGAGTCGATGGCACTGCTGGGACGCACCACGCTGGCGGTACCAGGGCGCGCGCGCAGCTCCTACGA
AGAACACATCTCGCTGGTCGAGGCGCTGGAAAAGCGCGACCCGGCACTGGCCGAACAGATCGCGCGCCGGCATATCCAGC
AGGCCTACAAGGTGCGGCTGTCGCTCTGGATCCAGGAACAGTCGGGCAGTTGA

Upstream 100 bases:

>100_bases
GCCTGGCCCTTTACACCATATTGCGTCGCCGTGATGTCAGGCGCGCACGAGCGGGTATGATGACTGGCTACGACAGTCCA
ACTGCATCAGCCAGCCTCAC

Downstream 100 bases:

>100_bases
TCTGCCCGGCAGCAGTCGGCCGTATCAGGCCGCCTGGGCCCGCGCCGTGCGCAGCGTGCCCAGGCTAAGCACGGCCAGCG
CCACCAGGATCAGCATCACG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MISQEFAGAAESGQAASLPRSERAYQQLRAAIQAGQLPPGTRLREVELAESLGLSRTPVREALSRLESEGLVVNEPNRGM
MVTQLDASMVSELYVMREVLEGTAAALAARHATDVEISLLRDIVERDLAIADDPDRLALNNRLFHETLHRCAHNRYLLKT
LRSLHESMALLGRTTLAVPGRARSSYEEHISLVEALEKRDPALAEQIARRHIQQAYKVRLSLWIQEQSGS

Sequences:

>Translated_230_residues
MISQEFAGAAESGQAASLPRSERAYQQLRAAIQAGQLPPGTRLREVELAESLGLSRTPVREALSRLESEGLVVNEPNRGM
MVTQLDASMVSELYVMREVLEGTAAALAARHATDVEISLLRDIVERDLAIADDPDRLALNNRLFHETLHRCAHNRYLLKT
LRSLHESMALLGRTTLAVPGRARSSYEEHISLVEALEKRDPALAEQIARRHIQQAYKVRLSLWIQEQSGS
>Mature_230_residues
MISQEFAGAAESGQAASLPRSERAYQQLRAAIQAGQLPPGTRLREVELAESLGLSRTPVREALSRLESEGLVVNEPNRGM
MVTQLDASMVSELYVMREVLEGTAAALAARHATDVEISLLRDIVERDLAIADDPDRLALNNRLFHETLHRCAHNRYLLKT
LRSLHESMALLGRTTLAVPGRARSSYEEHISLVEALEKRDPALAEQIARRHIQQAYKVRLSLWIQEQSGS

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787821, Length=201, Percent_Identity=26.865671641791, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25596; Mature: 25596

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISQEFAGAAESGQAASLPRSERAYQQLRAAIQAGQLPPGTRLREVELAESLGLSRTPVR
CCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHH
EALSRLESEGLVVNEPNRGMMVTQLDASMVSELYVMREVLEGTAAALAARHATDVEISLL
HHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RDIVERDLAIADDPDRLALNNRLFHETLHRCAHNRYLLKTLRSLHESMALLGRTTLAVPG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RARSSYEEHISLVEALEKRDPALAEQIARRHIQQAYKVRLSLWIQEQSGS
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure
MISQEFAGAAESGQAASLPRSERAYQQLRAAIQAGQLPPGTRLREVELAESLGLSRTPVR
CCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHH
EALSRLESEGLVVNEPNRGMMVTQLDASMVSELYVMREVLEGTAAALAARHATDVEISLL
HHHHHHHHCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RDIVERDLAIADDPDRLALNNRLFHETLHRCAHNRYLLKTLRSLHESMALLGRTTLAVPG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RARSSYEEHISLVEALEKRDPALAEQIARRHIQQAYKVRLSLWIQEQSGS
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA