| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
Click here to switch to the map view.
The map label for this gene is fhuF [H]
Identifier: 116695623
GI number: 116695623
Start: 1899397
End: 1900152
Strand: Direct
Name: fhuF [H]
Synonym: H16_B1684
Alternate gene names: 116695623
Gene position: 1899397-1900152 (Clockwise)
Preceding gene: 116695614
Following gene: 116695628
Centisome position: 65.22
GC content: 73.54
Gene sequence:
>756_bases TTGTTTCCGTTACCGATCCTGCTTGCACTGTTTCCCGAGCCGCTGCGTCACTACGCCGAGGCCGTACGCATCGGCCCCAC GACGTCCGATGACGTCATGCCCGCCGCGCTCATGTCCGCGCCGGCGGGCCGCGCCCCACTACGGCAGGCGCTTCACGCCA TGGCCGTCCACTACGGTGGCGACGATGCGCGCGTGGCCGGCTCGGTCTGGGCGCGGCATTGCTTCTCCGCGCTGCTGCCT GGCACGGTGGCCGCCGCGGCGCTGGCGCACCACGTGCTGCCCTTGCGCGACACGGCCATCCGGCCCGATCGGCACGGCCG CGCCGTGACGTTGCTGCTGCCACACGCTGGCCAGAGGTTTGCCGGCGCGCCGCCGCAGCAGCGTTACGGCGCCCTGCTGG ACGACCTGCTGTCACCGCTGATCGAAGCGCTGGCAGCGGCCAGCGGCGCGTCGCCGCGCCTGCTGTGGGCCAATGCCGGC GCTGTCGTCGCCGAGGTATTGCGCCACGCGCCCGCCCTGCTGCAGCCGGATATGCCGGCCACGGACGCCACGCTGGCGGC CGACGCGGCCTGGCTGATGGACACCCGCACCCGCCCCGACGGCCGCGACAACCCGCTGCATGCGCCGATGCGCGCGCACC GCGTGACGCAGGACGGCACCACCACCACGCTGTGGCTGCGCCGGCTGTGTTGCCTGCGCTACCGCTTGCCGGCCTTCACG CTGTGCGGCGACTGCCCGCGCCGCCTGCTGCGGTAA
Upstream 100 bases:
>100_bases TCTTTACAAAGCGAATTGCGAATATACCTGATAATCATTCTCATTTTCAACAAAGAAAAGGCGTTGACTGCATATCCGCA ACGCCGTACGGGGCTGCCTC
Downstream 100 bases:
>100_bases AGCCGTCGGCACCTAGGCCGCCAGCGCGCTGGCGCTGCCGTGCTCCACGCGCACCGGCACTTCGCCCAGCGTGGCGCCGG CCAGCGCCGGCAGCGCCAGC
Product: putative iron transport-related membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MFPLPILLALFPEPLRHYAEAVRIGPTTSDDVMPAALMSAPAGRAPLRQALHAMAVHYGGDDARVAGSVWARHCFSALLP GTVAAAALAHHVLPLRDTAIRPDRHGRAVTLLLPHAGQRFAGAPPQQRYGALLDDLLSPLIEALAAASGASPRLLWANAG AVVAEVLRHAPALLQPDMPATDATLAADAAWLMDTRTRPDGRDNPLHAPMRAHRVTQDGTTTTLWLRRLCCLRYRLPAFT LCGDCPRRLLR
Sequences:
>Translated_251_residues MFPLPILLALFPEPLRHYAEAVRIGPTTSDDVMPAALMSAPAGRAPLRQALHAMAVHYGGDDARVAGSVWARHCFSALLP GTVAAAALAHHVLPLRDTAIRPDRHGRAVTLLLPHAGQRFAGAPPQQRYGALLDDLLSPLIEALAAASGASPRLLWANAG AVVAEVLRHAPALLQPDMPATDATLAADAAWLMDTRTRPDGRDNPLHAPMRAHRVTQDGTTTTLWLRRLCCLRYRLPAFT LCGDCPRRLLR >Mature_251_residues MFPLPILLALFPEPLRHYAEAVRIGPTTSDDVMPAALMSAPAGRAPLRQALHAMAVHYGGDDARVAGSVWARHCFSALLP GTVAAAALAHHVLPLRDTAIRPDRHGRAVTLLLPHAGQRFAGAPPQQRYGALLDDLLSPLIEALAAASGASPRLLWANAG AVVAEVLRHAPALLQPDMPATDATLAADAAWLMDTRTRPDGRDNPLHAPMRAHRVTQDGTTTTLWLRRLCCLRYRLPAFT LCGDCPRRLLR
Specific function: Involved in the reduction of ferric iron in cytoplasmic ferrioxamine B [H]
COG id: COG4114
COG function: function code R; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790829, Length=181, Percent_Identity=28.7292817679558, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008090 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF [H]
EC number: NA
Molecular weight: Translated: 27035; Mature: 27035
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPLPILLALFPEPLRHYAEAVRIGPTTSDDVMPAALMSAPAGRAPLRQALHAMAVHYGG CCCHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC DDARVAGSVWARHCFSALLPGTVAAAALAHHVLPLRDTAIRPDRHGRAVTLLLPHAGQRF CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCCC AGAPPQQRYGALLDDLLSPLIEALAAASGASPRLLWANAGAVVAEVLRHAPALLQPDMPA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCHHCCCCCCC TDATLAADAAWLMDTRTRPDGRDNPLHAPMRAHRVTQDGTTTTLWLRRLCCLRYRLPAFT CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH LCGDCPRRLLR HHHHHHHHHCC >Mature Secondary Structure MFPLPILLALFPEPLRHYAEAVRIGPTTSDDVMPAALMSAPAGRAPLRQALHAMAVHYGG CCCHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC DDARVAGSVWARHCFSALLPGTVAAAALAHHVLPLRDTAIRPDRHGRAVTLLLPHAGQRF CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCCCC AGAPPQQRYGALLDDLLSPLIEALAAASGASPRLLWANAGAVVAEVLRHAPALLQPDMPA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCHHCCCCCCC TDATLAADAAWLMDTRTRPDGRDNPLHAPMRAHRVTQDGTTTTLWLRRLCCLRYRLPAFT CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH LCGDCPRRLLR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9990318 [H]