| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
Click here to switch to the map view.
The map label for this gene is 116695608
Identifier: 116695608
GI number: 116695608
Start: 1880224
End: 1880712
Strand: Direct
Name: 116695608
Synonym: H16_B1669
Alternate gene names: NA
Gene position: 1880224-1880712 (Clockwise)
Preceding gene: 116695607
Following gene: 116695612
Centisome position: 64.56
GC content: 69.73
Gene sequence:
>489_bases ATGGCTGAGCTGCTGAAAGACCGCGACTGGATCGCGGCACGCATTCCGCACCAGGGCACGATGTGCCTGCTCGACGGCGT GCTGGCCTGGGATCCGGCATCGGTTCGCTGCACGTCAGCCACGCATACGCGCGCGGACAACCCGCTGCGCGCGCACGGCC GGCTGGCCGCGCTCAGCGGCATTGAATACGCGGCACAGGCCATGGCCGTGCACGGCGCATTGCTGGCGGAAGCGGAATCA GGAATGGGCGCACAGCGCCCGCGCTCGGGCTACCTGGCCAGCGTGCGCAAGCTGGTGCTCCATGTGGAGCGGCTCGACGA TATCGACGCGCCGCTGCAGGTCGAGGCACAGCGCATCAGCGGTGAAGGCAGCAGCGTGCTGTATGCCTTCACCGTCAGCG CCAAGGGCCAGGCACTGCTGTCAGGCCGCGCGGCGGTCATCCTGGATGCCGCCGCAGTCGGCCAAAGCGCCGACCGCGGC GCCGGCTGA
Upstream 100 bases:
>100_bases CTGGCGGCCATCGCCCGCGGCGAGGCCACCACCGTGGTGCTCGATTATCTGGATACGCTGCAGCTTGCGGCCGAGGTGGA AAGCCTCGGCGGCCAGGCGG
Downstream 100 bases:
>100_bases AGCGCTTCAGCGCGCCGGCAGGATCTTGCCCGACACCGCGCCGAAGCCGACGCGATAGCCTTCGCCCTGGCAGTAGCCGG TCATGATCACGTCGTCGCCA
Product: 3-oxoacyl-[acyl-carrier-protein] reductase
Products: NA
Alternate protein names: Potential 3-Hydroxydecyl-(Acyl Carrier Protein) Dehydratase; Beta-Hydroxyacyl-Acyl Carrier Protein-Dehydratase; 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase; XanthomoNADin Biosynthesis Protein; -Hydroxymyristoyl-Acyl-Carrier-Protein Dehydratase; 3-Oxoacyl-[Acyl-Carrier Protein] Reductase; 3-Hydroxylacyl-(Acyl Carrier Protein) Dehydratase-Like
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MAELLKDRDWIAARIPHQGTMCLLDGVLAWDPASVRCTSATHTRADNPLRAHGRLAALSGIEYAAQAMAVHGALLAEAES GMGAQRPRSGYLASVRKLVLHVERLDDIDAPLQVEAQRISGEGSSVLYAFTVSAKGQALLSGRAAVILDAAAVGQSADRG AG
Sequences:
>Translated_162_residues MAELLKDRDWIAARIPHQGTMCLLDGVLAWDPASVRCTSATHTRADNPLRAHGRLAALSGIEYAAQAMAVHGALLAEAES GMGAQRPRSGYLASVRKLVLHVERLDDIDAPLQVEAQRISGEGSSVLYAFTVSAKGQALLSGRAAVILDAAAVGQSADRG AG >Mature_161_residues AELLKDRDWIAARIPHQGTMCLLDGVLAWDPASVRCTSATHTRADNPLRAHGRLAALSGIEYAAQAMAVHGALLAEAESG MGAQRPRSGYLASVRKLVLHVERLDDIDAPLQVEAQRISGEGSSVLYAFTVSAKGQALLSGRAAVILDAAAVGQSADRGA G
Specific function: Unknown
COG id: COG4706
COG function: function code I; Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16939; Mature: 16808
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELLKDRDWIAARIPHQGTMCLLDGVLAWDPASVRCTSATHTRADNPLRAHGRLAALSG CCCHHCCCCCEEEECCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHH IEYAAQAMAVHGALLAEAESGMGAQRPRSGYLASVRKLVLHVERLDDIDAPLQVEAQRIS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC GEGSSVLYAFTVSAKGQALLSGRAAVILDAAAVGQSADRGAG CCCCEEEEEEEECCCCCEEECCCEEEEEEHHHHCCCCCCCCC >Mature Secondary Structure AELLKDRDWIAARIPHQGTMCLLDGVLAWDPASVRCTSATHTRADNPLRAHGRLAALSG CCHHCCCCCEEEECCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHH IEYAAQAMAVHGALLAEAESGMGAQRPRSGYLASVRKLVLHVERLDDIDAPLQVEAQRIS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECC GEGSSVLYAFTVSAKGQALLSGRAAVILDAAAVGQSADRGAG CCCCEEEEEEEECCCCCEEECCCEEEEEEHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA