Click here to switch to the map view.

The map label for this gene is frcR [C]

Identifier: 116695438

GI number: 116695438

Start: 1681366

End: 1682634

Strand: Direct

Name: frcR [C]

Synonym: H16_B1497

Alternate gene names: 116695438

Gene position: 1681366-1682634 (Clockwise)

Preceding gene: 116695437

Following gene: 116695439

Centisome position: 57.73

GC content: 70.13

Gene sequence:

>1269_bases
ATGACCGCATCCAAAGCGGGCCGTGGCGTGAATTCCGCCAGCCTGCGCCTGTACAACGAACGCGCGCTGCTGCTGGCGCT
GCGCCGTGCCGGCGAGGCCTCCAAGGCTGACCTGGCGCGCATGGCGCAGCTGACCAATACGGCGGTGGGGAGCATCGTGC
AGACCCTGTCCGAGGAAGGTCTGGTCGAACAGTCCGGGCGCCGCACGGAAGGCCAGCGCGGCCAGCCGGCCAGCCTGATC
CGGCTGCAGCCCAAGGGCGCCTTCGGCATTGGCGTACGGCTGGACCGCGGCAGCATCGAGGTGGTGATGGTGGACTTTGC
CGGCCATATCCTGGCCAGCCGCGCCCACCAGCTGGTCCTGCCCCACCCTGACCAGGCGCTGGCAATGGTGCGGCACGATA
TTGCCGAGCTGCGCGCCCTGCTCACCCCCACCGAACAGAAGCGCCTGCTGGGCATCGGCGTGGCGCAGCCCTATAACCTG
GGTGCCTGGCTGCGCGAGCTGGACGTACAGGGCGAAGCCTTCCAGGCAAGCTTCCGCGCCTGGGACCAGGCTGACTTCCC
GGCAATGCTCAACGCCGCCACCGGCTTGCCGGTCTTCGGCGAGAACGACGGCACCGCCGCCGCGGTGGCCGAACTGTTCT
ACGGGCGCCACCATGCCCGGCATTTCCTCTATGTCTTCCTTGGCCCCGCCATCGGCGGCGGCGTGGTGCTCAATGGCGAC
TGCGTGCGCGGTGTCTCCGGCAATGCCGGCGATATCGCGATGATGCCGGTGCCGCCCAGCACCCTGCCCTCCGCGCCGGT
TGCCACCGGCACCGGCAAGCGGCGCGACATCCTGATCTCGCGCGCGTCGCTCAACGCCCTGACCCGCCACCTGCGCCACC
ACGGCGTGGTGGTCAACGGCCATGCCGACCTGCAGCGCCAGGTCGAGCTGGGCCACCCCGCGGTCGAGGAATGGATTGCC
GACTGCGTCGATGCGCTGGCGCCGGCGCTGCAGTCCGCCCTCGCCGTGCTCGACGTGCCGCTGGTGATCTTCGATGCCGA
TATCGACGGCGGCCTGGTCGCCACGCTGATTGCGCGCCTGCAGCAGGTGCTGGATGAAAGCGCCCCCGAAGCCCGCGCGC
CCGCCACCGTGGTGCGCGGCTGCTTTGGCGCCAACGCCGGCGCGGTGGGTGCCGCGTCGCTGCCGATGTTCATGAACTTC
TCGCCGCGCGCCGAACTGCTACGGGGCGCGTCTGCCATCGTTCCGGAGGCCGGCCATGCCATTGTCTGA

Upstream 100 bases:

>100_bases
CCAGGCGGCGCATCCGCCCTCCGGGTTTCCCCGCGGTTGAGTTCTGCGCACCCATATCATTTAATTCAACATGAATTAAT
TAATAGCGGACGGAGACAAG

Downstream 100 bases:

>100_bases
AGCACCGCGTACCTCGCCCATGGCAGCGCACCTGCATGGCGGCCATGCGGGCCCAGCGCCGCTGCTTGAACTGCGCAATA
TCTCCAAGACCTTCCCCGGC

Product: NagC-family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MTASKAGRGVNSASLRLYNERALLLALRRAGEASKADLARMAQLTNTAVGSIVQTLSEEGLVEQSGRRTEGQRGQPASLI
RLQPKGAFGIGVRLDRGSIEVVMVDFAGHILASRAHQLVLPHPDQALAMVRHDIAELRALLTPTEQKRLLGIGVAQPYNL
GAWLRELDVQGEAFQASFRAWDQADFPAMLNAATGLPVFGENDGTAAAVAELFYGRHHARHFLYVFLGPAIGGGVVLNGD
CVRGVSGNAGDIAMMPVPPSTLPSAPVATGTGKRRDILISRASLNALTRHLRHHGVVVNGHADLQRQVELGHPAVEEWIA
DCVDALAPALQSALAVLDVPLVIFDADIDGGLVATLIARLQQVLDESAPEARAPATVVRGCFGANAGAVGAASLPMFMNF
SPRAELLRGASAIVPEAGHAIV

Sequences:

>Translated_422_residues
MTASKAGRGVNSASLRLYNERALLLALRRAGEASKADLARMAQLTNTAVGSIVQTLSEEGLVEQSGRRTEGQRGQPASLI
RLQPKGAFGIGVRLDRGSIEVVMVDFAGHILASRAHQLVLPHPDQALAMVRHDIAELRALLTPTEQKRLLGIGVAQPYNL
GAWLRELDVQGEAFQASFRAWDQADFPAMLNAATGLPVFGENDGTAAAVAELFYGRHHARHFLYVFLGPAIGGGVVLNGD
CVRGVSGNAGDIAMMPVPPSTLPSAPVATGTGKRRDILISRASLNALTRHLRHHGVVVNGHADLQRQVELGHPAVEEWIA
DCVDALAPALQSALAVLDVPLVIFDADIDGGLVATLIARLQQVLDESAPEARAPATVVRGCFGANAGAVGAASLPMFMNF
SPRAELLRGASAIVPEAGHAIV
>Mature_421_residues
TASKAGRGVNSASLRLYNERALLLALRRAGEASKADLARMAQLTNTAVGSIVQTLSEEGLVEQSGRRTEGQRGQPASLIR
LQPKGAFGIGVRLDRGSIEVVMVDFAGHILASRAHQLVLPHPDQALAMVRHDIAELRALLTPTEQKRLLGIGVAQPYNLG
AWLRELDVQGEAFQASFRAWDQADFPAMLNAATGLPVFGENDGTAAAVAELFYGRHHARHFLYVFLGPAIGGGVVLNGDC
VRGVSGNAGDIAMMPVPPSTLPSAPVATGTGKRRDILISRASLNALTRHLRHHGVVVNGHADLQRQVELGHPAVEEWIAD
CVDALAPALQSALAVLDVPLVIFDADIDGGLVATLIARLQQVLDESAPEARAPATVVRGCFGANAGAVGAASLPMFMNFS
PRAELLRGASAIVPEAGHAIV

Specific function: May Be A Regulator In Specific Sugar Metabolism. May Influence The Rate Of Glucose Uptake Or Glycolysis In Cells In The Rich Medium. [C]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1787878, Length=250, Percent_Identity=24.4, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 44434; Mature: 44302

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASKAGRGVNSASLRLYNERALLLALRRAGEASKADLARMAQLTNTAVGSIVQTLSEEG
CCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LVEQSGRRTEGQRGQPASLIRLQPKGAFGIGVRLDRGSIEVVMVDFAGHILASRAHQLVL
CHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEEEHHHHHHHHCCCEEEC
PHPDQALAMVRHDIAELRALLTPTEQKRLLGIGVAQPYNLGAWLRELDVQGEAFQASFRA
CCCHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHC
WDQADFPAMLNAATGLPVFGENDGTAAAVAELFYGRHHARHFLYVFLGPAIGGGVVLNGD
CCCCCCCHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEECCC
CVRGVSGNAGDIAMMPVPPSTLPSAPVATGTGKRRDILISRASLNALTRHLRHHGVVVNG
EECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEC
HADLQRQVELGHPAVEEWIADCVDALAPALQSALAVLDVPLVIFDADIDGGLVATLIARL
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH
QQVLDESAPEARAPATVVRGCFGANAGAVGAASLPMFMNFSPRAELLRGASAIVPEAGHA
HHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHCCCHHCCCCCCCC
IV
CC
>Mature Secondary Structure 
TASKAGRGVNSASLRLYNERALLLALRRAGEASKADLARMAQLTNTAVGSIVQTLSEEG
CCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LVEQSGRRTEGQRGQPASLIRLQPKGAFGIGVRLDRGSIEVVMVDFAGHILASRAHQLVL
CHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEEEHHHHHHHHCCCEEEC
PHPDQALAMVRHDIAELRALLTPTEQKRLLGIGVAQPYNLGAWLRELDVQGEAFQASFRA
CCCHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHC
WDQADFPAMLNAATGLPVFGENDGTAAAVAELFYGRHHARHFLYVFLGPAIGGGVVLNGD
CCCCCCCHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEECCC
CVRGVSGNAGDIAMMPVPPSTLPSAPVATGTGKRRDILISRASLNALTRHLRHHGVVVNG
EECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEC
HADLQRQVELGHPAVEEWIADCVDALAPALQSALAVLDVPLVIFDADIDGGLVATLIARL
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH
QQVLDESAPEARAPATVVRGCFGANAGAVGAASLPMFMNFSPRAELLRGASAIVPEAGHA
HHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCCHHHHHCCCHHCCCCCCCC
IV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]