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The map label for this gene is oruR [H]

Identifier: 116695138

GI number: 116695138

Start: 1347809

End: 1348822

Strand: Direct

Name: oruR [H]

Synonym: H16_B1193

Alternate gene names: 116695138

Gene position: 1347809-1348822 (Clockwise)

Preceding gene: 116695131

Following gene: 116695155

Centisome position: 46.28

GC content: 69.72

Gene sequence:

>1014_bases
ATGGAAAAAGGCAGTGTCGCCATCTGTTTCGTCCACCACGCCATCGCGGGGCTGCGCGCGCGCGGCATCGACCCGGATCC
GGTGCTGCGCGGCTCTGGCATTGCGCCGGCGCTGCTGGCGGTGCCGCAGTCACGCGTATCGGCCGCCAGCTACAGCGAGC
TGTGGATGGCCGTGGCGGCGGCGCTGGACGATGAATTCTTCGGGCAGGATTCGCGCAGCATGAAGTGCGGCAGTTTTGCC
ATGCTGTGCCACGCGGTGGCGGGCAGCCGCACCCTGGGGCAGGGGCTGGAGCGCATCACGCGGTACTTCCGGCTGCTGCT
GGACGATATCGGCGTGCGGCTGGAGCGCCACGGCGACGAGGCCGCGCTGGTGCTGACCGCGCCCTGCGCACACCTGGGGC
GGCAGCCCGGCGTGTTTGCCAAGGAAACCATGCTGATCATGCTGCATGGCCTGATGAGCTGGCTGCTGCGGCGGCGCGTG
CCGGTGCGGCTGGCGGCCTTCGACTACGACGAGCCGCAGTACAGCGCGGAATACCGCGTCATGTATTCGCGCCAGCTGGC
GTTCGGGCAGCCGGCCACGGCGCTGGTCTTCGACGCGGCACTGCTGGAGCAGCCGGTGCGCCAGGACGAGCGCAGCCTGA
AGGCCTTCCTGCGCGATGCGCCGCACAACGTGGTGGTGAAGTACTCCGACCGCGCCAGCGTGGGCGCGCGCGTGCGCAGG
CTGCTGCGTAACCAACGCCCGGATCAATGGCCCACCTTTGAAGATCTGGCGATCAGCCTGAACCTGTCGGCATCATCGCT
GCGGCGCCGGCTGATGGAGGAGGGCGTCAGCTACCAGGACCTGAAGGACGCGCTGCGGCGCGATCTTGCCATCGAGGCGC
TCAGCCATTCGGGCCGCCCGGTCGCGGATATCGCGGCCGAGCTCGGCTTTGCCGAGCCGGGCGCGTTCCACCGGGCGTTC
CGGCGCTGGACCGGATCGCGCCCGGGGGCATACCGCCGCGTGGCGGAAGGTTGA

Upstream 100 bases:

>100_bases
GCTTGGCGTTTGACCTGCGGGCAGTGTAGGAACGCCGGAGGCGGGCTCCTATGCCAAAATCCGCCAATCTTCGTGAACTC
GTTTGCCACCCTCCAGCGCC

Downstream 100 bases:

>100_bases
TGCGGCGCGTCTACAGCTGTGCCGCGTGGTGGCGGATGTGATCGGCGATAAAGCTGGTGATGAAGTAGTAGCCGTGGTCG
TAGCCGCTGTGCCGGCGCAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MEKGSVAICFVHHAIAGLRARGIDPDPVLRGSGIAPALLAVPQSRVSAASYSELWMAVAAALDDEFFGQDSRSMKCGSFA
MLCHAVAGSRTLGQGLERITRYFRLLLDDIGVRLERHGDEAALVLTAPCAHLGRQPGVFAKETMLIMLHGLMSWLLRRRV
PVRLAAFDYDEPQYSAEYRVMYSRQLAFGQPATALVFDAALLEQPVRQDERSLKAFLRDAPHNVVVKYSDRASVGARVRR
LLRNQRPDQWPTFEDLAISLNLSASSLRRRLMEEGVSYQDLKDALRRDLAIEALSHSGRPVADIAAELGFAEPGAFHRAF
RRWTGSRPGAYRRVAEG

Sequences:

>Translated_337_residues
MEKGSVAICFVHHAIAGLRARGIDPDPVLRGSGIAPALLAVPQSRVSAASYSELWMAVAAALDDEFFGQDSRSMKCGSFA
MLCHAVAGSRTLGQGLERITRYFRLLLDDIGVRLERHGDEAALVLTAPCAHLGRQPGVFAKETMLIMLHGLMSWLLRRRV
PVRLAAFDYDEPQYSAEYRVMYSRQLAFGQPATALVFDAALLEQPVRQDERSLKAFLRDAPHNVVVKYSDRASVGARVRR
LLRNQRPDQWPTFEDLAISLNLSASSLRRRLMEEGVSYQDLKDALRRDLAIEALSHSGRPVADIAAELGFAEPGAFHRAF
RRWTGSRPGAYRRVAEG
>Mature_337_residues
MEKGSVAICFVHHAIAGLRARGIDPDPVLRGSGIAPALLAVPQSRVSAASYSELWMAVAAALDDEFFGQDSRSMKCGSFA
MLCHAVAGSRTLGQGLERITRYFRLLLDDIGVRLERHGDEAALVLTAPCAHLGRQPGVFAKETMLIMLHGLMSWLLRRRV
PVRLAAFDYDEPQYSAEYRVMYSRQLAFGQPATALVFDAALLEQPVRQDERSLKAFLRDAPHNVVVKYSDRASVGARVRR
LLRNQRPDQWPTFEDLAISLNLSASSLRRRLMEEGVSYQDLKDALRRDLAIEALSHSGRPVADIAAELGFAEPGAFHRAF
RRWTGSRPGAYRRVAEG

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37414; Mature: 37414

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKGSVAICFVHHAIAGLRARGIDPDPVLRGSGIAPALLAVPQSRVSAASYSELWMAVAA
CCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
ALDDEFFGQDSRSMKCGSFAMLCHAVAGSRTLGQGLERITRYFRLLLDDIGVRLERHGDE
HHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AALVLTAPCAHLGRQPGVFAKETMLIMLHGLMSWLLRRRVPVRLAAFDYDEPQYSAEYRV
EEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH
MYSRQLAFGQPATALVFDAALLEQPVRQDERSLKAFLRDAPHNVVVKYSDRASVGARVRR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH
LLRNQRPDQWPTFEDLAISLNLSASSLRRRLMEEGVSYQDLKDALRRDLAIEALSHSGRP
HHHHCCCCCCCCHHHEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH
VADIAAELGFAEPGAFHRAFRRWTGSRPGAYRRVAEG
HHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCCC
>Mature Secondary Structure
MEKGSVAICFVHHAIAGLRARGIDPDPVLRGSGIAPALLAVPQSRVSAASYSELWMAVAA
CCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
ALDDEFFGQDSRSMKCGSFAMLCHAVAGSRTLGQGLERITRYFRLLLDDIGVRLERHGDE
HHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AALVLTAPCAHLGRQPGVFAKETMLIMLHGLMSWLLRRRVPVRLAAFDYDEPQYSAEYRV
EEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH
MYSRQLAFGQPATALVFDAALLEQPVRQDERSLKAFLRDAPHNVVVKYSDRASVGARVRR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH
LLRNQRPDQWPTFEDLAISLNLSASSLRRRLMEEGVSYQDLKDALRRDLAIEALSHSGRP
HHHHCCCCCCCCHHHEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCH
VADIAAELGFAEPGAFHRAFRRWTGSRPGAYRRVAEG
HHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]