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The map label for this gene is ybcL [C]

Identifier: 116695062

GI number: 116695062

Start: 1267648

End: 1268127

Strand: Direct

Name: ybcL [C]

Synonym: H16_B1117

Alternate gene names: 116695062

Gene position: 1267648-1268127 (Clockwise)

Preceding gene: 116695061

Following gene: 116695063

Centisome position: 43.52

GC content: 68.96

Gene sequence:

>480_bases
ATGCCGTTCCAGCTGCAATCGACCGCATTCGCCCCGGGTGGCGAGATTCCCGCAGAGCACACCTGCGAAGGCGCCGATAT
TTCCCCGCCGCTTGCCTGGACCGGCCTGCCGCCCGGCACGGCCAGCCTGGCGCTGATCGTCGACGACCCCGACGCACCCG
ACCCCGCCGCGCCGAAAATGACCTGGGTCCACTGGCTGCTCTATAACCTGCCGTCCCATGCCGAGGCGCTGCCGGCGGAT
ATCGGCAAGGCCGGGCTGCCCGCGGGCACGCGCGACGGGCTGAACGACTGGCACCGCGCTGGTTATGGCGGCCCGTGTCC
GCCGATCGGCCGGCACCGCTACTTCTTCAAGCTGTATGCGCTGGACGTGGCGTTGCCGGACCTGGGGATGCCTGACAAGG
AGGCGCTGGAGCGGGCGATGCGGGGCCATATCCTGGCCACCGCAGAGTTGATCGGCACTTACCAGAAGCTGCAGCGCTAG

Upstream 100 bases:

>100_bases
TGCTGGAGACGCAGCCGCCATAGCGCGCGGCGACGCCTTGCGTGGGACACCGATCCGGCCTAAGTTGGAGCCATCCCTCA
GTGCGTCCAGCGAGGCCCGT

Downstream 100 bases:

>100_bases
GCGCGGTGCGGCCGGAGGCTACGTCATGTCGTACCGAATGCTCCGCCTTGATGTTCGTTGGCCGTGGTGGCGGCTGGCGG
CGGCCGGGGCGCTGTCACTG

Product: phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MPFQLQSTAFAPGGEIPAEHTCEGADISPPLAWTGLPPGTASLALIVDDPDAPDPAAPKMTWVHWLLYNLPSHAEALPAD
IGKAGLPAGTRDGLNDWHRAGYGGPCPPIGRHRYFFKLYALDVALPDLGMPDKEALERAMRGHILATAELIGTYQKLQR

Sequences:

>Translated_159_residues
MPFQLQSTAFAPGGEIPAEHTCEGADISPPLAWTGLPPGTASLALIVDDPDAPDPAAPKMTWVHWLLYNLPSHAEALPAD
IGKAGLPAGTRDGLNDWHRAGYGGPCPPIGRHRYFFKLYALDVALPDLGMPDKEALERAMRGHILATAELIGTYQKLQR
>Mature_158_residues
PFQLQSTAFAPGGEIPAEHTCEGADISPPLAWTGLPPGTASLALIVDDPDAPDPAAPKMTWVHWLLYNLPSHAEALPADI
GKAGLPAGTRDGLNDWHRAGYGGPCPPIGRHRYFFKLYALDVALPDLGMPDKEALERAMRGHILATAELIGTYQKLQR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=164, Percent_Identity=37.1951219512195, Blast_Score=101, Evalue=2e-23,
Organism=Escherichia coli, GI1786990, Length=165, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 17085; Mature: 16953

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFQLQSTAFAPGGEIPAEHTCEGADISPPLAWTGLPPGTASLALIVDDPDAPDPAAPKM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCHH
TWVHWLLYNLPSHAEALPADIGKAGLPAGTRDGLNDWHRAGYGGPCPPIGRHRYFFKLYA
HHHHHHHHCCCCCHHHCCHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEE
LDVALPDLGMPDKEALERAMRGHILATAELIGTYQKLQR
HHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PFQLQSTAFAPGGEIPAEHTCEGADISPPLAWTGLPPGTASLALIVDDPDAPDPAAPKM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCHH
TWVHWLLYNLPSHAEALPADIGKAGLPAGTRDGLNDWHRAGYGGPCPPIGRHRYFFKLYA
HHHHHHHHCCCCCHHHCCHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEE
LDVALPDLGMPDKEALERAMRGHILATAELIGTYQKLQR
HHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]