| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694975
Identifier: 116694975
GI number: 116694975
Start: 1163132
End: 1164124
Strand: Direct
Name: 116694975
Synonym: H16_B1030
Alternate gene names: NA
Gene position: 1163132-1164124 (Clockwise)
Preceding gene: 116694974
Following gene: 116694976
Centisome position: 39.94
GC content: 62.64
Gene sequence:
>993_bases ATGTCATCACTGAAGAAGCTGCTCGCCATCACATTGTGCGCAGAGGCAATCATTGCCCTGTGCGCGCCAGGGCCGCTGCA GGCACAGGAAGCCTGGCCCGCACGCCCGATTCAAATGATCGTTCCGTCGTCTCCCGGCTCGGGAACCGACGCGCTGGCGC GGGCCATGGCGCAGCGCCTTTCCGAATCGCTGAAGCAGGCCGTGGTCGTGGAGAACCGGCCGGGCGGCAGCGGGGTGATC GGAACCAATGCCGTTCTCAAGGCGGCGCCGGACGGCTACACGATTCTCTACACAACGGCATCCAACATGGTGGTTGCGCC TGCCGTCATGAAGTCCATATCCCAGGAGGCAAGAAAGGGCCTCATGCCGATCGCGCAGACAGCCGCGGGTGGGGTGTTGC TGCTGGTGAGCCCGGACCTGCCGGTGCACGACTTGCCAGGACTCATCGAGCTGGTGAAGGCGAATCCGGACAAGTACAGC TATGGCAGCTGGGCCACCGGCTCGTCCGCGCACTTGACCATGGAATGGCTGAAGAAGCAGACCGGCATGAAGACCGAGCA CGTCGCATATCGGACAACAAGTCAACTGCTCACCGAGCTTTCCTCAGGGGTGCTGAAGATCGGCTGGACCGATCCCAGCG TCGCGGTTCCGTTCCTGCGTTCCGGGAAGGTGCGTGGCATTGCCATCGTCGGCAACGTGCGCTCGCCACAGCTTGCCGAC GTCAAGACCATGAGTGAACAGGGCTACAAGTTCAACACGGTGGGATGGTTCGGCATGTTCGCCCCGGCCGGAACCAGTCC GGCGATCGTGAAGCGGCTGTCCGATGAGGCCAACAAGGTGCAGGCATTGCCGGAGATCGCGGCGCTGATGAAGAAACTGA ACTTCGAGCCGCCGCCGGTAAAGACCTCCGCGCAGCTGGGCGAGATCGTCCGCAGCGATCTGCAAGTCTGGTCGAAGATC GCTAGCGACGCAGGGATCAGGGTCGACGAATAG
Upstream 100 bases:
>100_bases GCGCACGATAGCCTGAGCCGGTAGCAATCGCTGGCCGCCCAATGGTGGGGCTGGCAGCACTTTTCAGGCTGGGGAATAGT CGAGAGAACTGGGGACGACA
Downstream 100 bases:
>100_bases GGGCTGGCGCCCCGTCATTGCGGCCTGCCCAGCGGCCCACTGCCCGCCATGATGGCAGCCGGCCGTCAACGATCCAGTGC GCCTGCACCAGCGAATCCTT
Product: extra-cytoplasmic solute receptor
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MSSLKKLLAITLCAEAIIALCAPGPLQAQEAWPARPIQMIVPSSPGSGTDALARAMAQRLSESLKQAVVVENRPGGSGVI GTNAVLKAAPDGYTILYTTASNMVVAPAVMKSISQEARKGLMPIAQTAAGGVLLLVSPDLPVHDLPGLIELVKANPDKYS YGSWATGSSAHLTMEWLKKQTGMKTEHVAYRTTSQLLTELSSGVLKIGWTDPSVAVPFLRSGKVRGIAIVGNVRSPQLAD VKTMSEQGYKFNTVGWFGMFAPAGTSPAIVKRLSDEANKVQALPEIAALMKKLNFEPPPVKTSAQLGEIVRSDLQVWSKI ASDAGIRVDE
Sequences:
>Translated_330_residues MSSLKKLLAITLCAEAIIALCAPGPLQAQEAWPARPIQMIVPSSPGSGTDALARAMAQRLSESLKQAVVVENRPGGSGVI GTNAVLKAAPDGYTILYTTASNMVVAPAVMKSISQEARKGLMPIAQTAAGGVLLLVSPDLPVHDLPGLIELVKANPDKYS YGSWATGSSAHLTMEWLKKQTGMKTEHVAYRTTSQLLTELSSGVLKIGWTDPSVAVPFLRSGKVRGIAIVGNVRSPQLAD VKTMSEQGYKFNTVGWFGMFAPAGTSPAIVKRLSDEANKVQALPEIAALMKKLNFEPPPVKTSAQLGEIVRSDLQVWSKI ASDAGIRVDE >Mature_329_residues SSLKKLLAITLCAEAIIALCAPGPLQAQEAWPARPIQMIVPSSPGSGTDALARAMAQRLSESLKQAVVVENRPGGSGVIG TNAVLKAAPDGYTILYTTASNMVVAPAVMKSISQEARKGLMPIAQTAAGGVLLLVSPDLPVHDLPGLIELVKANPDKYSY GSWATGSSAHLTMEWLKKQTGMKTEHVAYRTTSQLLTELSSGVLKIGWTDPSVAVPFLRSGKVRGIAIVGNVRSPQLADV KTMSEQGYKFNTVGWFGMFAPAGTSPAIVKRLSDEANKVQALPEIAALMKKLNFEPPPVKTSAQLGEIVRSDLQVWSKIA SDAGIRVDE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34940; Mature: 34809
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLKKLLAITLCAEAIIALCAPGPLQAQEAWPARPIQMIVPSSPGSGTDALARAMAQRL CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH SESLKQAVVVENRPGGSGVIGTNAVLKAAPDGYTILYTTASNMVVAPAVMKSISQEARKG HHHHHHHEEEECCCCCCCEECCCHHEEECCCCEEEEEEECCCEEEHHHHHHHHHHHHHHC LMPIAQTAAGGVLLLVSPDLPVHDLPGLIELVKANPDKYSYGSWATGSSAHLTMEWLKKQ CCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH TGMKTEHVAYRTTSQLLTELSSGVLKIGWTDPSVAVPFLRSGKVRGIAIVGNVRSPQLAD HCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHCCCEEEEEEEECCCCCCHHH VKTMSEQGYKFNTVGWFGMFAPAGTSPAIVKRLSDEANKVQALPEIAALMKKLNFEPPPV HHHHHHCCCEEECEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KTSAQLGEIVRSDLQVWSKIASDAGIRVDE CCHHHHHHHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure SSLKKLLAITLCAEAIIALCAPGPLQAQEAWPARPIQMIVPSSPGSGTDALARAMAQRL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH SESLKQAVVVENRPGGSGVIGTNAVLKAAPDGYTILYTTASNMVVAPAVMKSISQEARKG HHHHHHHEEEECCCCCCCEECCCHHEEECCCCEEEEEEECCCEEEHHHHHHHHHHHHHHC LMPIAQTAAGGVLLLVSPDLPVHDLPGLIELVKANPDKYSYGSWATGSSAHLTMEWLKKQ CCHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH TGMKTEHVAYRTTSQLLTELSSGVLKIGWTDPSVAVPFLRSGKVRGIAIVGNVRSPQLAD HCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHCCCEEEEEEEECCCCCCHHH VKTMSEQGYKFNTVGWFGMFAPAGTSPAIVKRLSDEANKVQALPEIAALMKKLNFEPPPV HHHHHHCCCEEECEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC KTSAQLGEIVRSDLQVWSKIASDAGIRVDE CCHHHHHHHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9583950; 12910271 [H]