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The map label for this gene is 116694907

Identifier: 116694907

GI number: 116694907

Start: 1084688

End: 1085275

Strand: Direct

Name: 116694907

Synonym: H16_B0962

Alternate gene names: NA

Gene position: 1084688-1085275 (Clockwise)

Preceding gene: 116694906

Following gene: 116694910

Centisome position: 37.24

GC content: 59.35

Gene sequence:

>588_bases
ATGAGTATCGAGATCGGAAAAGACATCACTGCGTTTGCCGACCAACTGCTGGACGCCGTATTCCTGGTCGACACAGGCGG
CCGCATCCAGTATGTCAGCGCCGCGTGCGAGGGCATTTTTGGCTATACGCCGAAGGATATGGCGGGCGAGTTCATCATCG
ATCTGGTCATGCCCGCCGACCGGGACCGGACCATTATCGAGGCCAAGCAGGTGATGTCGGGAAAGAAGCGGATCGGTTTT
GAAAACCGCTATCGCCACAAGGACGGCAGTGCCGTCCATATCATGTGGTCCGCCGGATGGCTCCAGTCGGAACGGTTGCG
CGTCGGGGTTGCCCGCGATGTCACTGCGCTGAAGAAGGAGAGCATTCTTGACCTTGGGCTGGCGCTTTCTTCCGTTCCGT
TGGCGCCCCACGAGCAGAAGGTCTTGCGGCTGCTGTTGACCGACGCATCGGAAAAGCAGATTGCCCAGCGCCTCGGCCTG
GCCGTTTCAACGACCCATTCCTATGTGACCGGCATTTTCCGGAAATTCGGCGTCAGGGGCCGGGCGGGGTTGATGAGCCT
GTGGCTGGAAAATCTGACCAGGGACTAA

Upstream 100 bases:

>100_bases
GTGGTCTAGTCTTCACGTTGACCCGCGTTCGGCTGAAATCCGGGCGAAGGGGCCAATCAAGGCGCCAGTAAAAGCGCCAG
TATCGGGGGTCTGGACTGCC

Downstream 100 bases:

>100_bases
ATACGCAATATAGATTGTATTTCTCGAATACAAACCATGATCTGTATTGGTCAGAAACTTCGTCCCCGCGCCTCATAAAT
CGCTTATCTCTACCGGCGCC

Product: ligand binding regulator

Products: NA

Alternate protein names: Sensory Box Protein; Diguanylate Cyclase With PAS/PAC And GAF Sensors; Multi-Sensor Signal Transduction Histidine Kinase; LuxR Family Transcriptional Regulator; Pas/Pac Sensor Signal Transduction Histidine Kinase; GGDEF Domain-Containing Protein; Lux R Family Regulator; Transcriptional Regulator LuxR Family; Sensory Box-Containing Diguanylate Cyclase; Intracellular Signaling Protein; Sensory Box GGDEF/EAL Domain-Containing Protein; Diguanylate Cyclase With Pas/Pac And Gaf Sensors; GGDEF Sensory Box Protein; Ggef/Eal/Pas/Pac-Domain Containing Protein; Sensor/ Regulator Protein; PAS/PAC Sensor-Containing Diguanylate Cyclase

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSIEIGKDITAFADQLLDAVFLVDTGGRIQYVSAACEGIFGYTPKDMAGEFIIDLVMPADRDRTIIEAKQVMSGKKRIGF
ENRYRHKDGSAVHIMWSAGWLQSERLRVGVARDVTALKKESILDLGLALSSVPLAPHEQKVLRLLLTDASEKQIAQRLGL
AVSTTHSYVTGIFRKFGVRGRAGLMSLWLENLTRD

Sequences:

>Translated_195_residues
MSIEIGKDITAFADQLLDAVFLVDTGGRIQYVSAACEGIFGYTPKDMAGEFIIDLVMPADRDRTIIEAKQVMSGKKRIGF
ENRYRHKDGSAVHIMWSAGWLQSERLRVGVARDVTALKKESILDLGLALSSVPLAPHEQKVLRLLLTDASEKQIAQRLGL
AVSTTHSYVTGIFRKFGVRGRAGLMSLWLENLTRD
>Mature_194_residues
SIEIGKDITAFADQLLDAVFLVDTGGRIQYVSAACEGIFGYTPKDMAGEFIIDLVMPADRDRTIIEAKQVMSGKKRIGFE
NRYRHKDGSAVHIMWSAGWLQSERLRVGVARDVTALKKESILDLGLALSSVPLAPHEQKVLRLLLTDASEKQIAQRLGLA
VSTTHSYVTGIFRKFGVRGRAGLMSLWLENLTRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21606; Mature: 21475

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50112 PAS ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEIGKDITAFADQLLDAVFLVDTGGRIQYVSAACEGIFGYTPKDMAGEFIIDLVMPAD
CCCCCCCCHHHHHHHHHHHEEEEECCCCEEEHHHHHHHHCCCCCHHHHHHHHHHEECCCC
RDRTIIEAKQVMSGKKRIGFENRYRHKDGSAVHIMWSAGWLQSERLRVGVARDVTALKKE
CCCHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEECCCCCCCHHEECHHHHHHHHHHH
SILDLGLALSSVPLAPHEQKVLRLLLTDASEKQIAQRLGLAVSTTHSYVTGIFRKFGVRG
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
RAGLMSLWLENLTRD
CHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIEIGKDITAFADQLLDAVFLVDTGGRIQYVSAACEGIFGYTPKDMAGEFIIDLVMPAD
CCCCCCCHHHHHHHHHHHEEEEECCCCEEEHHHHHHHHCCCCCHHHHHHHHHHEECCCC
RDRTIIEAKQVMSGKKRIGFENRYRHKDGSAVHIMWSAGWLQSERLRVGVARDVTALKKE
CCCHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEECCCCCCCHHEECHHHHHHHHHHH
SILDLGLALSSVPLAPHEQKVLRLLLTDASEKQIAQRLGLAVSTTHSYVTGIFRKFGVRG
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
RAGLMSLWLENLTRD
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA