| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694789
Identifier: 116694789
GI number: 116694789
Start: 956150
End: 956983
Strand: Direct
Name: 116694789
Synonym: H16_B0843
Alternate gene names: NA
Gene position: 956150-956983 (Clockwise)
Preceding gene: 116694787
Following gene: 116694793
Centisome position: 32.83
GC content: 71.58
Gene sequence:
>834_bases ATGGCGTACGACAGCATCCTGGTCCATCTCGACGGCAACCGGCAGGCCATGCAGCGCTTGCAGGTTGCGGCACGCCTTGC CACCGCCAGCCAGTGTCCGCTGATCGGCCTGCTGGCCGGGCGCGTGCCAGACCCCAGCTGGTTCTACCGCATGAACAATG CCCAGCGCTGCCTGGCCGAAGACCAGGAGCGGCGCCGGCTGCAGCGCGAGAACATGCGTTGTGCCTTCGCGGCCGCCACG CGCGAGCTGGCGGTTGCCTGCGACTGGCGCACCGTCGAGCGCGATCCGGTGCCACTGGCGCTGCGCGAGGCGCGCGAGGC CGGCCTGATCGTCTCCGGCCAGTATGACGCCGACAACGCTGAAGGCCCGGTGGCGCGGCAGCTGTTGGAGGCGCTGCTGC TTGAGAGCGGCCGGCCGGCGCTGGTGGTGCCCTGTTCCGGCGCTTTCGCCACCGTGGGCACACGCGTGCTGGTGGCCTGG AACGGCAGCCGCGAGGCCGCGCGTGCCTTGCACGACGCGCTGCCGCTGATGGCCGGGGCACGCGCGCGGGTGCTGGGCGC CCATGCCGCCAGGGAGCCGCGTGCCGATGCCACTCCGGTCAGCCATGCCGTGCACGTGCTGGAGCGACAGGGTGTGGCAG TTGAGGTGGAGCACGGCCCGGGCGGTGGCGACCTGGCCATCGGTGAGCTGATCCTGTCGCGAGCGTCGGACTTTGGTGCC GACCTGATCGTGATGGGCGCCTACGGCCACGGCCGGCTGCGCGAGCTGGTGCTGGGCGGCGTGACCAGGGTGGTGCTGGA GTCGATGACGGTGCCGGTGCTGTTCTCGCACTGA
Upstream 100 bases:
>100_bases CGCACCGCGCACCACCGTTGCTGGCGCGATCGGCAAGTCGGCATGCATTGCCTGCGACGCGGCCTAGACTGGAAGCAAAA GATTCGGACGCGAGGGCATC
Downstream 100 bases:
>100_bases AGCGCAGCGCCAGGGTTCATGCGGCAAGCCCCTCCAGCGCGGCGCCCCCCGGTGGTCTTCAGTCGACCGTGATGTGGTTG GCCTGGATCACCTTGCCCCA
Product: universal stress protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MAYDSILVHLDGNRQAMQRLQVAARLATASQCPLIGLLAGRVPDPSWFYRMNNAQRCLAEDQERRRLQRENMRCAFAAAT RELAVACDWRTVERDPVPLALREAREAGLIVSGQYDADNAEGPVARQLLEALLLESGRPALVVPCSGAFATVGTRVLVAW NGSREAARALHDALPLMAGARARVLGAHAAREPRADATPVSHAVHVLERQGVAVEVEHGPGGGDLAIGELILSRASDFGA DLIVMGAYGHGRLRELVLGGVTRVVLESMTVPVLFSH
Sequences:
>Translated_277_residues MAYDSILVHLDGNRQAMQRLQVAARLATASQCPLIGLLAGRVPDPSWFYRMNNAQRCLAEDQERRRLQRENMRCAFAAAT RELAVACDWRTVERDPVPLALREAREAGLIVSGQYDADNAEGPVARQLLEALLLESGRPALVVPCSGAFATVGTRVLVAW NGSREAARALHDALPLMAGARARVLGAHAAREPRADATPVSHAVHVLERQGVAVEVEHGPGGGDLAIGELILSRASDFGA DLIVMGAYGHGRLRELVLGGVTRVVLESMTVPVLFSH >Mature_276_residues AYDSILVHLDGNRQAMQRLQVAARLATASQCPLIGLLAGRVPDPSWFYRMNNAQRCLAEDQERRRLQRENMRCAFAAATR ELAVACDWRTVERDPVPLALREAREAGLIVSGQYDADNAEGPVARQLLEALLLESGRPALVVPCSGAFATVGTRVLVAWN GSREAARALHDALPLMAGARARVLGAHAAREPRADATPVSHAVHVLERQGVAVEVEHGPGGGDLAIGELILSRASDFGAD LIVMGAYGHGRLRELVLGGVTRVVLESMTVPVLFSH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29785; Mature: 29653
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYDSILVHLDGNRQAMQRLQVAARLATASQCPLIGLLAGRVPDPSWFYRMNNAQRCLAE CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCHHEEEECCHHHHHHC DQERRRLQRENMRCAFAAATRELAVACDWRTVERDPVPLALREAREAGLIVSGQYDADNA HHHHHHHHHHCCEEEEEHHHHHEEEEECCEECCCCCCCHHHHHHHHCCEEEECCCCCCCC EGPVARQLLEALLLESGRPALVVPCSGAFATVGTRVLVAWNGSREAARALHDALPLMAGA CCHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCC RARVLGAHAAREPRADATPVSHAVHVLERQGVAVEVEHGPGGGDLAIGELILSRASDFGA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCC DLIVMGAYGHGRLRELVLGGVTRVVLESMTVPVLFSH CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure AYDSILVHLDGNRQAMQRLQVAARLATASQCPLIGLLAGRVPDPSWFYRMNNAQRCLAE CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCHHEEEECCHHHHHHC DQERRRLQRENMRCAFAAATRELAVACDWRTVERDPVPLALREAREAGLIVSGQYDADNA HHHHHHHHHHCCEEEEEHHHHHEEEEECCEECCCCCCCHHHHHHHHCCEEEECCCCCCCC EGPVARQLLEALLLESGRPALVVPCSGAFATVGTRVLVAWNGSREAARALHDALPLMAGA CCHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCC RARVLGAHAAREPRADATPVSHAVHVLERQGVAVEVEHGPGGGDLAIGELILSRASDFGA HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCC DLIVMGAYGHGRLRELVLGGVTRVVLESMTVPVLFSH CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA