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The map label for this gene is ycdL [C]

Identifier: 116694760

GI number: 116694760

Start: 920434

End: 921060

Strand: Direct

Name: ycdL [C]

Synonym: H16_B0814

Alternate gene names: 116694760

Gene position: 920434-921060 (Clockwise)

Preceding gene: 116694759

Following gene: 116694761

Centisome position: 31.6

GC content: 67.78

Gene sequence:

>627_bases
ATGCACAAGGAGATCGGCGCGTACCAGCGCCAGGGCTTCGGCAACGACCTGGAACTGGCGGGCCCGTTCGGGCTGCTGCT
GGTCGATTTCGTCAACGGCTTTGCCGACCCGGAGGTGTTCGGCGGCGGCAATATCCGCGAGGCCATCGCCAACACCGTGC
CGCTGCTGGCCGTGGCACGGCGCGAAGGCTGGGCGATTGCGCACAGCCGCATCGTCTTTGCGGACGATGGTTCGGACCAC
AACATCTTTTCCATGAAGGTGCCGAACATGCTGTCGCTGAAGGAGCGCGAACGCAACAGCGCCATCGTCGAAGAACTGGC
GCCGCGGGTGGGCGAGCTGGTGGTGCGCAAGACCGTGCCGTCGGCGTTCTTCGGTACGTCGCTGGCCGCCTGGCTGACGC
AGCGCGGCGTGCGCACGCTGGTGGTGGCCGGCGCGGTGACCAGCGGCTGCGTGCGCGCCAGCGTGGTGGACGCCATGCAG
TACGGCTTGCGGCCGCTGGTGCTGTCGGATTGCGTCGGCGACCGCGCGCTTGGACCGCACCAGGCCAACCTGTTCGACAT
GGAGCAGAAATATGCGACGGTCACCACGCGCGCGGAAGGGCTGGCGGCCATCGGGGTGCGCGAATGA

Upstream 100 bases:

>100_bases
ATATTCCCGTGCGCAACTGCACCGTGCGCCTGGACGGCGTGGATGTGGTGAGCCGCGGCAAGGTCATGGACGGGTTCCGC
TACCCGGAGGAGAAGTAGCC

Downstream 100 bases:

>100_bases
GCGCTTGCATGAATCATCGGGACGGATAAAACAATGACATCGTCGATGGAACCGGATCATTCGGAAGGAGGGTGCGGCCA
GGGCGTGGGAGCCCGGGTGG

Product: amidase related to nicotinamidase

Products: NA

Alternate protein names: N-carbamoylsarcosine amidohydrolase; CSHase [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MHKEIGAYQRQGFGNDLELAGPFGLLLVDFVNGFADPEVFGGGNIREAIANTVPLLAVARREGWAIAHSRIVFADDGSDH
NIFSMKVPNMLSLKERERNSAIVEELAPRVGELVVRKTVPSAFFGTSLAAWLTQRGVRTLVVAGAVTSGCVRASVVDAMQ
YGLRPLVLSDCVGDRALGPHQANLFDMEQKYATVTTRAEGLAAIGVRE

Sequences:

>Translated_208_residues
MHKEIGAYQRQGFGNDLELAGPFGLLLVDFVNGFADPEVFGGGNIREAIANTVPLLAVARREGWAIAHSRIVFADDGSDH
NIFSMKVPNMLSLKERERNSAIVEELAPRVGELVVRKTVPSAFFGTSLAAWLTQRGVRTLVVAGAVTSGCVRASVVDAMQ
YGLRPLVLSDCVGDRALGPHQANLFDMEQKYATVTTRAEGLAAIGVRE
>Mature_208_residues
MHKEIGAYQRQGFGNDLELAGPFGLLLVDFVNGFADPEVFGGGNIREAIANTVPLLAVARREGWAIAHSRIVFADDGSDH
NIFSMKVPNMLSLKERERNSAIVEELAPRVGELVVRKTVPSAFFGTSLAAWLTQRGVRTLVVAGAVTSGCVRASVVDAMQ
YGLRPLVLSDCVGDRALGPHQANLFDMEQKYATVTTRAEGLAAIGVRE

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: =3.5.1.59 [H]

Molecular weight: Translated: 22395; Mature: 22395

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKEIGAYQRQGFGNDLELAGPFGLLLVDFVNGFADPEVFGGGNIREAIANTVPLLAVAR
CCCCCCCHHHCCCCCCCEECCCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHH
REGWAIAHSRIVFADDGSDHNIFSMKVPNMLSLKERERNSAIVEELAPRVGELVVRKTVP
CCCEEEEEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SAFFGTSLAAWLTQRGVRTLVVAGAVTSGCVRASVVDAMQYGLRPLVLSDCVGDRALGPH
HHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC
QANLFDMEQKYATVTTRAEGLAAIGVRE
CCCHHHHHHHHHHHHHHCCCEEECCCCC
>Mature Secondary Structure
MHKEIGAYQRQGFGNDLELAGPFGLLLVDFVNGFADPEVFGGGNIREAIANTVPLLAVAR
CCCCCCCHHHCCCCCCCEECCCHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHH
REGWAIAHSRIVFADDGSDHNIFSMKVPNMLSLKERERNSAIVEELAPRVGELVVRKTVP
CCCEEEEEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SAFFGTSLAAWLTQRGVRTLVVAGAVTSGCVRASVVDAMQYGLRPLVLSDCVGDRALGPH
HHHHHHHHHHHHHHCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC
QANLFDMEQKYATVTTRAEGLAAIGVRE
CCCHHHHHHHHHHHHHHCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1381445; 8913306 [H]