| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694756
Identifier: 116694756
GI number: 116694756
Start: 916786
End: 917748
Strand: Direct
Name: 116694756
Synonym: H16_B0810
Alternate gene names: NA
Gene position: 916786-917748 (Clockwise)
Preceding gene: 116694745
Following gene: 116694757
Centisome position: 31.48
GC content: 67.19
Gene sequence:
>963_bases ATGACCAAAGTGAAGAAGATCGCCCTCGAAGAGCATTTCATGACGCCGGGATTTCAGGCCTATTCCAAGGCGTTCACGCA GCATATTGATCCGGCGGTGTTTGCCGAGCTGGGCCGCCGCCTCGCCGATTTCGACGAGGACCGCCTTGCCGAGATGGACC GCGCCGGCATCGACATCACGGTGCTGTCGCAGACGGGTCCGGGCGTGCAGGGCGAGCGCGATGCCGGCCTCGCCGTGGCG CGGGCGCGCGAGAGCAATGACTTCCTGGCCGCGCAGATCGCGCGCCACCCCACGCGCTTTGCCGGCTTTGCCGCGCTGCC CATGCACGACCCGGAACAGGCCGCGCGCGAGCTGGAACGCGCCGTGCGCGAGCTTGGCTTCAAGGGCTCGCTGGTGAACG GCCATACCCACGGGCGCTACTACGACGACCCGGCATACGATGCTTTCTGGGAGCGCATGCAGGCGCTGGACGTGCCCATG TACCTGCACCCGACCGACGCGCTGGTTCAGCCGCAGGTCCTGGCGGGCCACCCCGAGCTGACCGGCGCGGCGTGGGGCTG GGGCGTCGAGACCGCATCGCATGCGCTGCGGCTGCTGTTCGGCGGCGTGTTCGACCGCTTCCCGCGCCTGAAGCTCATCC TCGGCCATATGGGCGAGGGCCTGCCGTACCAGCGCTGGCGCTTCGACAGCCGCTTTGCGGTCTATTCGCACGGCGTCCGG CTGGAGCGCTCACCTTCGGAATACATCGGCACCAATATCGTCATCACCACTTCGGGGGTGTGTTCGCACGGTGCGCTGGC CGGTGCCATTGCCGAGCTCGGCGCTGAGGCCGTGATGTTCTCGGTCGACTATCCCTACGAATCCACCGAAGTCGCGGCGA AGTTCATCGAGGACGCGCCGCTCGACGACACCATGCGCGCGCTGGTCTGCCACGGCAACGCGCAACGCCTGCTCAAGCTG TAA
Upstream 100 bases:
>100_bases AACTAATCAGTGTACTGATCAATTGCATCGGTGCACGCCGCATGCCATGCAGCACACGCCCGCAGCGAAGCGATTTCACC AATCAGGAGCCCCCACCAGC
Downstream 100 bases:
>100_bases CCGTACAACCCGAGGACCCTCATGCAAAAAGTCTTTCGCATCGGCCAGATCGTTCCCAGCTCGAACACGACCATGGAAAC CGAGATTCCCGCGATGCTGC
Product: amidohydrolase family protein
Products: NA
Alternate protein names: Amidohydrolase; Amidohydrolase/Decarboxylase; Amidohydrolase Family Protein; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; Metal-Dependent Hydrolase; O-Pyrocatechuate Decarboxylase; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; Hydrolase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; Tryptophan 2 3-Dioxygenase; Decarboxylase; 2 3-Dihydroxybenzoic Acid Decarboxylase; Amidohydrolase Family; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase; Amidase; 5-Carboxyvanillate Decarboxylase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Amidohydrolase 2 Family Protein; Metal Dependent Hydrolase; Minocarboxymuconate-Semialdehyde Decarboxylase.; 5-Carboxy-2-Hydroxymuconate-6-Semialdehyde Decarboxylase
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MTKVKKIALEEHFMTPGFQAYSKAFTQHIDPAVFAELGRRLADFDEDRLAEMDRAGIDITVLSQTGPGVQGERDAGLAVA RARESNDFLAAQIARHPTRFAGFAALPMHDPEQAARELERAVRELGFKGSLVNGHTHGRYYDDPAYDAFWERMQALDVPM YLHPTDALVQPQVLAGHPELTGAAWGWGVETASHALRLLFGGVFDRFPRLKLILGHMGEGLPYQRWRFDSRFAVYSHGVR LERSPSEYIGTNIVITTSGVCSHGALAGAIAELGAEAVMFSVDYPYESTEVAAKFIEDAPLDDTMRALVCHGNAQRLLKL
Sequences:
>Translated_320_residues MTKVKKIALEEHFMTPGFQAYSKAFTQHIDPAVFAELGRRLADFDEDRLAEMDRAGIDITVLSQTGPGVQGERDAGLAVA RARESNDFLAAQIARHPTRFAGFAALPMHDPEQAARELERAVRELGFKGSLVNGHTHGRYYDDPAYDAFWERMQALDVPM YLHPTDALVQPQVLAGHPELTGAAWGWGVETASHALRLLFGGVFDRFPRLKLILGHMGEGLPYQRWRFDSRFAVYSHGVR LERSPSEYIGTNIVITTSGVCSHGALAGAIAELGAEAVMFSVDYPYESTEVAAKFIEDAPLDDTMRALVCHGNAQRLLKL >Mature_319_residues TKVKKIALEEHFMTPGFQAYSKAFTQHIDPAVFAELGRRLADFDEDRLAEMDRAGIDITVLSQTGPGVQGERDAGLAVAR ARESNDFLAAQIARHPTRFAGFAALPMHDPEQAARELERAVRELGFKGSLVNGHTHGRYYDDPAYDAFWERMQALDVPMY LHPTDALVQPQVLAGHPELTGAAWGWGVETASHALRLLFGGVFDRFPRLKLILGHMGEGLPYQRWRFDSRFAVYSHGVRL ERSPSEYIGTNIVITTSGVCSHGALAGAIAELGAEAVMFSVDYPYESTEVAAKFIEDAPLDDTMRALVCHGNAQRLLKL
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI109715856, Length=282, Percent_Identity=27.6595744680851, Blast_Score=98, Evalue=9e-21, Organism=Caenorhabditis elegans, GI71995651, Length=322, Percent_Identity=26.3975155279503, Blast_Score=88, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35369; Mature: 35238
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVKKIALEEHFMTPGFQAYSKAFTQHIDPAVFAELGRRLADFDEDRLAEMDRAGIDIT CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEE VLSQTGPGVQGERDAGLAVARARESNDFLAAQIARHPTRFAGFAALPMHDPEQAARELER EEECCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHCCHHHHCEEECCCCCHHHHHHHHHH AVRELGFKGSLVNGHTHGRYYDDPAYDAFWERMQALDVPMYLHPTDALVQPQVLAGHPEL HHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHCCHHHCCCCCC TGAAWGWGVETASHALRLLFGGVFDRFPRLKLILGHMGEGLPYQRWRFDSRFAVYSHGVR CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCCCCEEEEECCEE LERSPSEYIGTNIVITTSGVCSHGALAGAIAELGAEAVMFSVDYPYESTEVAAKFIEDAP EECCCHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCC LDDTMRALVCHGNAQRLLKL CCHHHHHHHHCCCHHHHHCC >Mature Secondary Structure TKVKKIALEEHFMTPGFQAYSKAFTQHIDPAVFAELGRRLADFDEDRLAEMDRAGIDIT CCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCEEE VLSQTGPGVQGERDAGLAVARARESNDFLAAQIARHPTRFAGFAALPMHDPEQAARELER EEECCCCCCCCCCCCCHHEEECCCCCCHHHHHHHHCCHHHHCEEECCCCCHHHHHHHHHH AVRELGFKGSLVNGHTHGRYYDDPAYDAFWERMQALDVPMYLHPTDALVQPQVLAGHPEL HHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHCCHHHCCCCCC TGAAWGWGVETASHALRLLFGGVFDRFPRLKLILGHMGEGLPYQRWRFDSRFAVYSHGVR CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCCCCEEEEECCEE LERSPSEYIGTNIVITTSGVCSHGALAGAIAELGAEAVMFSVDYPYESTEVAAKFIEDAP EECCCHHHHCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCC LDDTMRALVCHGNAQRLLKL CCHHHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA