| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
Click here to switch to the map view.
The map label for this gene is fhuA [H]
Identifier: 116694731
GI number: 116694731
Start: 886900
End: 889083
Strand: Direct
Name: fhuA [H]
Synonym: H16_B0785
Alternate gene names: 116694731
Gene position: 886900-889083 (Clockwise)
Preceding gene: 116694728
Following gene: 116694732
Centisome position: 30.45
GC content: 69.09
Gene sequence:
>2184_bases ATGCTGCTTGCGCAGCTCAGCCGTGCCCGGCGCCGCGCGCCGTTTTCGTTCCAGCCTGTTGTGCCAGACCTGCGCCCGGT CCAGGCGCGTTCATTGCGGCCGGTTGCCGCCCTGATGCTGGCGATGTCCGGCCTGGCCGAGGCGGCGGATACCACCGAGG CCTCCGATATTACGCTGCCGGCGGTGTCGGTGGTCGGCACGGCCTCCGCATCATACAACCCGCCCGACGCCTCCGGCGCG ACCCGCACCGACACGCCGCTGCGCGAAATTCCACAGTCGGTGCGCGTGGTGCCGCGCGCCATGCTGGACGATATCGCCGC GACCCGTTTCGCCCAGACCTTCGACTATGTCAGCGGCATCGCGCGCCAGAACAACTTCGGCGGCCTGTGGGACAACTTCG CCATGCGCGGCTTCACCGGCCATGAGAACACCGGCGCGGGCTACCTGGTCAACGGCTTTGCCGCCAACCGCGGCTATACC GCGCCGATGGATGCGGCCACGATCGAACGCGTGGAAGTGCTCAAGGGCCCGACGTCATCGCTGTACGGCACCAGCGAGCC GGGCGGCACCTTCAACGTGGTCACGCGCCAGCCGCAGTTCCGGCCTGCGCAGCGCTATGGCTTCGAGCTTGGCACGCGCG ACGGCTATCGTGCCACGGCCGATGTCACCGGCCCGCTTGGCGAGAACGTGGCCGGCCGGCTGATCGCCGTGGCCGACCAC CAGGGCAGCACGCGCGACTACATCAACAGCCAGCGCTACCTGGTGGCGCCGTCGTTCACCTGGACCCTGGGCAACGACAC CGTGCTGCAGTACGCGGCCGAATTCCAGCGCTACACCACGCCGATGGACCGCGGCGTGGTGGCCGTCAACGGCCAGCTGG GCCGCATCCCGCGCTCGCGCTTCCTGGGCGAGCCCGGCGACGGCGACATGCGGCTGGACAGCCAGTCGCACCAGCTCAGC GTGGAGCACCAGTTCAGTCAGAACTGGAAGGGCAGGCTCGGCCTGTCCTACCGCGGCGGCGCACTGACGGGACATAGCAG CGAGGCGACTTCACTGGCCGCCGACGGCCGCACGCTCTGGCGCCAGCGCCGCTACCGTGACTTCCAGTCGGACGATGTCT CGCTGCAGGCCAGCGTGACCGGCAAGTTCAGCACCGGCCCGGTCGGGCATGAACTGCTGATGGGGGTGGATGCCTACCGC TTCGGCAATACCATGGCGATCCTGCGCAAGAACCCCAGCGCCGCGGCGCCGTACGCGATCGACATCTACGACCCGGCCTA TGGCCAGCCGGCGCCGCCGATGCCGTGGAACATGGACACGTACGAGCGCCAGCGCAATCTCGGCGCCTACGCGCAGGACC AGCTGAGCCTGGGCGAGCGCTGGCGCGTGCTGGCCGGCGTGCGCTTCGACGCCTTCGACCAGTCGCTGGACAACCACCTG CGCGGCACGCGCACCACGCAGCACCAGAACGCAGTGTCGCCGCGCGTGGGCGTGAGCTACCTGGCCAGCCAGAACGTGTC GCTGTTTGCCAATGCCAGCCAGTCATTCCGTCCCAATGCCGGCGCCGACGCCGCGGGGCTGCCGTTCGACCCCGAGCGCG GCCGCGCGGTGGAGGCCGGCATCAAGTTCGACAGCGAGGACCGCCGCAGCGGCGCCACGCTGGCCATCTTTGAGATCCGC AAGCGCAATGTGCTGGCCACCGACCCGTCCGATCCCTCCTTCTATATCGCCGCCGGCGAAGCGCGCAGCCGCGGCCTGGA GCTGGATGTGGCCGGGCAGCTTGGCACCCACTGGCGCGTATCGGGCAGTTTTGCGCTGACCGATGCCGAGATCACGCAGG ACACGCGCCTGGCCGCCGGCACGCCGCTGTCCAACGTGCCGCGCACCAGCGGCAGCGTGCTGGCGGTGTACGAGGATGCC GCGCCGGTGGGCCAGCGCTATGGCGTTGGTGCCGGCCTGCGTTATGTGGGGCGGCGTCCGGGCGATGTGCAGGACAGCTT CTCGCTGCCGGCCTATGTGCTGGTGGACCTGCATGGCTACTGGCAATACAGCCGCAACGTGCGCGTGTCGCTCAACGTGG GCAACCTGTTCGACAAGACCTATTACGCCAGTTCGTACAGCAGCCTGTGGATTGCGCCGGGCGCGGGCCGCAGTGTGCGG CTGGGCGTGCAACTGAGCTATTGA
Upstream 100 bases:
>100_bases TGACTAGAATCTTAATGAGAAATTATTATCATTAGTGAGTCGCTGCGGTTTGCCAGTCGGATGGCCGCCGCCGCGACTCG TTTTTATTGGGGTGTTCCTT
Downstream 100 bases:
>100_bases CGATGCTGCCAGCCAAGGCGCGCACTGCCGCGCCCCTGTCTTCTCCGACAGATTTCCCTTCTGCCGCGGTCGCGCGGCCG GCCGGCGGCCGGCTGCTGTC
Product: outer membrane receptor, TonB-dependent
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MLLAQLSRARRRAPFSFQPVVPDLRPVQARSLRPVAALMLAMSGLAEAADTTEASDITLPAVSVVGTASASYNPPDASGA TRTDTPLREIPQSVRVVPRAMLDDIAATRFAQTFDYVSGIARQNNFGGLWDNFAMRGFTGHENTGAGYLVNGFAANRGYT APMDAATIERVEVLKGPTSSLYGTSEPGGTFNVVTRQPQFRPAQRYGFELGTRDGYRATADVTGPLGENVAGRLIAVADH QGSTRDYINSQRYLVAPSFTWTLGNDTVLQYAAEFQRYTTPMDRGVVAVNGQLGRIPRSRFLGEPGDGDMRLDSQSHQLS VEHQFSQNWKGRLGLSYRGGALTGHSSEATSLAADGRTLWRQRRYRDFQSDDVSLQASVTGKFSTGPVGHELLMGVDAYR FGNTMAILRKNPSAAAPYAIDIYDPAYGQPAPPMPWNMDTYERQRNLGAYAQDQLSLGERWRVLAGVRFDAFDQSLDNHL RGTRTTQHQNAVSPRVGVSYLASQNVSLFANASQSFRPNAGADAAGLPFDPERGRAVEAGIKFDSEDRRSGATLAIFEIR KRNVLATDPSDPSFYIAAGEARSRGLELDVAGQLGTHWRVSGSFALTDAEITQDTRLAAGTPLSNVPRTSGSVLAVYEDA APVGQRYGVGAGLRYVGRRPGDVQDSFSLPAYVLVDLHGYWQYSRNVRVSLNVGNLFDKTYYASSYSSLWIAPGAGRSVR LGVQLSY
Sequences:
>Translated_727_residues MLLAQLSRARRRAPFSFQPVVPDLRPVQARSLRPVAALMLAMSGLAEAADTTEASDITLPAVSVVGTASASYNPPDASGA TRTDTPLREIPQSVRVVPRAMLDDIAATRFAQTFDYVSGIARQNNFGGLWDNFAMRGFTGHENTGAGYLVNGFAANRGYT APMDAATIERVEVLKGPTSSLYGTSEPGGTFNVVTRQPQFRPAQRYGFELGTRDGYRATADVTGPLGENVAGRLIAVADH QGSTRDYINSQRYLVAPSFTWTLGNDTVLQYAAEFQRYTTPMDRGVVAVNGQLGRIPRSRFLGEPGDGDMRLDSQSHQLS VEHQFSQNWKGRLGLSYRGGALTGHSSEATSLAADGRTLWRQRRYRDFQSDDVSLQASVTGKFSTGPVGHELLMGVDAYR FGNTMAILRKNPSAAAPYAIDIYDPAYGQPAPPMPWNMDTYERQRNLGAYAQDQLSLGERWRVLAGVRFDAFDQSLDNHL RGTRTTQHQNAVSPRVGVSYLASQNVSLFANASQSFRPNAGADAAGLPFDPERGRAVEAGIKFDSEDRRSGATLAIFEIR KRNVLATDPSDPSFYIAAGEARSRGLELDVAGQLGTHWRVSGSFALTDAEITQDTRLAAGTPLSNVPRTSGSVLAVYEDA APVGQRYGVGAGLRYVGRRPGDVQDSFSLPAYVLVDLHGYWQYSRNVRVSLNVGNLFDKTYYASSYSSLWIAPGAGRSVR LGVQLSY >Mature_727_residues MLLAQLSRARRRAPFSFQPVVPDLRPVQARSLRPVAALMLAMSGLAEAADTTEASDITLPAVSVVGTASASYNPPDASGA TRTDTPLREIPQSVRVVPRAMLDDIAATRFAQTFDYVSGIARQNNFGGLWDNFAMRGFTGHENTGAGYLVNGFAANRGYT APMDAATIERVEVLKGPTSSLYGTSEPGGTFNVVTRQPQFRPAQRYGFELGTRDGYRATADVTGPLGENVAGRLIAVADH QGSTRDYINSQRYLVAPSFTWTLGNDTVLQYAAEFQRYTTPMDRGVVAVNGQLGRIPRSRFLGEPGDGDMRLDSQSHQLS VEHQFSQNWKGRLGLSYRGGALTGHSSEATSLAADGRTLWRQRRYRDFQSDDVSLQASVTGKFSTGPVGHELLMGVDAYR FGNTMAILRKNPSAAAPYAIDIYDPAYGQPAPPMPWNMDTYERQRNLGAYAQDQLSLGERWRVLAGVRFDAFDQSLDNHL RGTRTTQHQNAVSPRVGVSYLASQNVSLFANASQSFRPNAGADAAGLPFDPERGRAVEAGIKFDSEDRRSGATLAIFEIR KRNVLATDPSDPSFYIAAGEARSRGLELDVAGQLGTHWRVSGSFALTDAEITQDTRLAAGTPLSNVPRTSGSVLAVYEDA APVGQRYGVGAGLRYVGRRPGDVQDSFSLPAYVLVDLHGYWQYSRNVRVSLNVGNLFDKTYYASSYSSLWIAPGAGRSVR LGVQLSY
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=742, Percent_Identity=28.167115902965, Blast_Score=234, Evalue=2e-62, Organism=Escherichia coli, GI1787024, Length=778, Percent_Identity=24.5501285347044, Blast_Score=145, Evalue=1e-35, Organism=Escherichia coli, GI1787344, Length=741, Percent_Identity=24.1565452091768, Blast_Score=117, Evalue=3e-27, Organism=Escherichia coli, GI1790743, Length=558, Percent_Identity=22.2222222222222, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79014; Mature: 79014
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAQLSRARRRAPFSFQPVVPDLRPVQARSLRPVAALMLAMSGLAEAADTTEASDITLP CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEC AVSVVGTASASYNPPDASGATRTDTPLREIPQSVRVVPRAMLDDIAATRFAQTFDYVSGI CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARQNNFGGLWDNFAMRGFTGHENTGAGYLVNGFAANRGYTAPMDAATIERVEVLKGPTSS HHCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHH LYGTSEPGGTFNVVTRQPQFRPAQRYGFELGTRDGYRATADVTGPLGENVAGRLIAVADH CCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECC QGSTRDYINSQRYLVAPSFTWTLGNDTVLQYAAEFQRYTTPMDRGVVAVNGQLGRIPRSR CCCCHHHHCCCEEEEECCEEEECCCHHHHHHHHHHHHHCCCHHCCEEEECCCCCCCCHHH FLGEPGDGDMRLDSQSHQLSVEHQFSQNWKGRLGLSYRGGALTGHSSEATSLAADGRTLW HCCCCCCCCEEECCCCCEEEEEEHHCCCCCCEEEEEECCCEECCCCCCCHHHHCCCHHHH RQRRYRDFQSDDVSLQASVTGKFSTGPVGHELLMGVDAYRFGNTMAILRKNPSAAAPYAI HHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCHHHHCCCEEEEEECCCCCCCCEEE DIYDPAYGQPAPPMPWNMDTYERQRNLGAYAQDQLSLGERWRVLAGVRFDAFDQSLDNHL EECCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHH RGTRTTQHQNAVSPRVGVSYLASQNVSLFANASQSFRPNAGADAAGLPFDPERGRAVEAG CCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEC IKFDSEDRRSGATLAIFEIRKRNVLATDPSDPSFYIAAGEARSRGLELDVAGQLGTHWRV CEECCCCCCCCCEEEEEEEECCCEEEECCCCCCEEEEECCHHHCCEEEEECCCCCCEEEE SGSFALTDAEITQDTRLAAGTPLSNVPRTSGSVLAVYEDAAPVGQRYGVGAGLRYVGRRP CCCEEEECCHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCHHCCCCCCHHHHCCCC GDVQDSFSLPAYVLVDLHGYWQYSRNVRVSLNVGNLFDKTYYASSYSSLWIAPGAGRSVR CCCCCCCCCCEEEEEEEECCEEECCCEEEEEECCCHHHHHEECCCCCEEEEECCCCCEEE LGVQLSY EEEEECC >Mature Secondary Structure MLLAQLSRARRRAPFSFQPVVPDLRPVQARSLRPVAALMLAMSGLAEAADTTEASDITLP CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEC AVSVVGTASASYNPPDASGATRTDTPLREIPQSVRVVPRAMLDDIAATRFAQTFDYVSGI CEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARQNNFGGLWDNFAMRGFTGHENTGAGYLVNGFAANRGYTAPMDAATIERVEVLKGPTSS HHCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHH LYGTSEPGGTFNVVTRQPQFRPAQRYGFELGTRDGYRATADVTGPLGENVAGRLIAVADH CCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECC QGSTRDYINSQRYLVAPSFTWTLGNDTVLQYAAEFQRYTTPMDRGVVAVNGQLGRIPRSR CCCCHHHHCCCEEEEECCEEEECCCHHHHHHHHHHHHHCCCHHCCEEEECCCCCCCCHHH FLGEPGDGDMRLDSQSHQLSVEHQFSQNWKGRLGLSYRGGALTGHSSEATSLAADGRTLW HCCCCCCCCEEECCCCCEEEEEEHHCCCCCCEEEEEECCCEECCCCCCCHHHHCCCHHHH RQRRYRDFQSDDVSLQASVTGKFSTGPVGHELLMGVDAYRFGNTMAILRKNPSAAAPYAI HHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCHHHHCCCEEEEEECCCCCCCCEEE DIYDPAYGQPAPPMPWNMDTYERQRNLGAYAQDQLSLGERWRVLAGVRFDAFDQSLDNHL EECCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHH RGTRTTQHQNAVSPRVGVSYLASQNVSLFANASQSFRPNAGADAAGLPFDPERGRAVEAG CCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEC IKFDSEDRRSGATLAIFEIRKRNVLATDPSDPSFYIAAGEARSRGLELDVAGQLGTHWRV CEECCCCCCCCCEEEEEEEECCCEEEECCCCCCEEEEECCHHHCCEEEEECCCCCCEEEE SGSFALTDAEITQDTRLAAGTPLSNVPRTSGSVLAVYEDAAPVGQRYGVGAGLRYVGRRP CCCEEEECCHHCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCHHCCCCCCHHHHCCCC GDVQDSFSLPAYVLVDLHGYWQYSRNVRVSLNVGNLFDKTYYASSYSSLWIAPGAGRSVR CCCCCCCCCCEEEEEEEECCEEECCCEEEEEECCCHHHHHEECCCCCEEEEECCCCCEEE LGVQLSY EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]