| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694717
Identifier: 116694717
GI number: 116694717
Start: 863948
End: 864955
Strand: Direct
Name: 116694717
Synonym: H16_B0766
Alternate gene names: NA
Gene position: 863948-864955 (Clockwise)
Preceding gene: 116694716
Following gene: 116694728
Centisome position: 29.66
GC content: 67.56
Gene sequence:
>1008_bases GTGGACAAGACGAAGAACAAGCCGCAAGCCCGCCGGGACATCCTGAGACACGCACTGCTGGCCCTGGCCGCCGCGCCGCT GGCACTGGCGGCGGGGACCGCGCAAGCGGCCTGGCCGGAAAAGCCGATCCGGCTGGTGGTGGCATTCCCGCCCGGCGGCC CGGTCGACACGCACGCGCGCCTGCTGGCCGAAAAGCTGCAGCCGATCCTGGGCCAGACCATCGTGATCGACTACAAGGCC GGCGCCGCCGGCAATATCGGCTCGGACAACGTCGCCAAGTCCGCGCCCGACGGCTACACGCTGCTGCTGGCCAACACTGG GCAGATGGCCATCAACAACTCGCTCTATCCCAAGCTGCCCTACAGCATGCCGAAGGACTTCGCGCCGGTGGCACGCACGG CGCTGATCCCGCTGGTGATGGTGGTCAACAACAACGTGCCGGCGCGCGACCTGAAGGCGTTCATCAGCTATGCCAAGGCC AACCCGGGCAAGCTGAACTTTGCCTCGGGCGGCAATGGCGGCATCTCGCACCTGATGCCGGAAATGTTCAAGCAGGCTTC GGGCACGTTCATCGTCCATATCCCGTACAAGGGCAGCTCGCCGGCGCTGACCGACGTGATGGGCGGCCAGGCGCAGATGA TGGCCGACTCGATCCCGCTGTTCACGCAGTACATCAAGGCAGGCAAGGTGCGTGCGCTGGCGGTGACGTCGCCGCAGCGC TCTCCCGCGCTGCCGGATGTGCCGACGATGCAGGAGGCCGGGCTGAAGGGCTTCGAGGTGGTTGGCTTCTATGGCATGCT GGCGCCGGCGGGCACGCCCAGGGAGGTGGTCTCACGCCTGTCCGGTGCCTTGCGCACGGTGCTGGCCGACCCCGACACCA AGGCGAAGCTCGAGCAGCAGGGTGCCGAGCCCGCATGGCAGTCGCCGGAGGCATTTGCCGCCACGATCACGGCGGAGCAG AAGCGCTGGGGGCAGGCAGTGAAGGCGTCGGGCGCAAGTATCGACTGA
Upstream 100 bases:
>100_bases TCAGAAAGTCACAAAAGAGTCACAATGGCGGCTGGCGACTGTTCGTAGCACCCGGAACCAGGGCGCTGGCGGGCAGCCCT GTATCAAGGAGAAATCAACC
Downstream 100 bases:
>100_bases GCCGGGCGGGCACCCGCGGGTGCCGTGGCTCATGGCTCAGCTGCGGCCCCGATATTTCAGGCTTGCGCAGTGGCCGACGA GCGCGGTGATGCAGCAGGCA
Product: extra-cytoplasmic solute receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MDKTKNKPQARRDILRHALLALAAAPLALAAGTAQAAWPEKPIRLVVAFPPGGPVDTHARLLAEKLQPILGQTIVIDYKA GAAGNIGSDNVAKSAPDGYTLLLANTGQMAINNSLYPKLPYSMPKDFAPVARTALIPLVMVVNNNVPARDLKAFISYAKA NPGKLNFASGGNGGISHLMPEMFKQASGTFIVHIPYKGSSPALTDVMGGQAQMMADSIPLFTQYIKAGKVRALAVTSPQR SPALPDVPTMQEAGLKGFEVVGFYGMLAPAGTPREVVSRLSGALRTVLADPDTKAKLEQQGAEPAWQSPEAFAATITAEQ KRWGQAVKASGASID
Sequences:
>Translated_335_residues MDKTKNKPQARRDILRHALLALAAAPLALAAGTAQAAWPEKPIRLVVAFPPGGPVDTHARLLAEKLQPILGQTIVIDYKA GAAGNIGSDNVAKSAPDGYTLLLANTGQMAINNSLYPKLPYSMPKDFAPVARTALIPLVMVVNNNVPARDLKAFISYAKA NPGKLNFASGGNGGISHLMPEMFKQASGTFIVHIPYKGSSPALTDVMGGQAQMMADSIPLFTQYIKAGKVRALAVTSPQR SPALPDVPTMQEAGLKGFEVVGFYGMLAPAGTPREVVSRLSGALRTVLADPDTKAKLEQQGAEPAWQSPEAFAATITAEQ KRWGQAVKASGASID >Mature_335_residues MDKTKNKPQARRDILRHALLALAAAPLALAAGTAQAAWPEKPIRLVVAFPPGGPVDTHARLLAEKLQPILGQTIVIDYKA GAAGNIGSDNVAKSAPDGYTLLLANTGQMAINNSLYPKLPYSMPKDFAPVARTALIPLVMVVNNNVPARDLKAFISYAKA NPGKLNFASGGNGGISHLMPEMFKQASGTFIVHIPYKGSSPALTDVMGGQAQMMADSIPLFTQYIKAGKVRALAVTSPQR SPALPDVPTMQEAGLKGFEVVGFYGMLAPAGTPREVVSRLSGALRTVLADPDTKAKLEQQGAEPAWQSPEAFAATITAEQ KRWGQAVKASGASID
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35257; Mature: 35257
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKTKNKPQARRDILRHALLALAAAPLALAAGTAQAAWPEKPIRLVVAFPPGGPVDTHAR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHH LLAEKLQPILGQTIVIDYKAGAAGNIGSDNVAKSAPDGYTLLLANTGQMAINNSLYPKLP HHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHCCCCCCEEEEEECCCCEEECCCCCCCCC YSMPKDFAPVARTALIPLVMVVNNNVPARDLKAFISYAKANPGKLNFASGGNGGISHLMP CCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH EMFKQASGTFIVHIPYKGSSPALTDVMGGQAQMMADSIPLFTQYIKAGKVRALAVTSPQR HHHHHCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHCCHHHHHHHHCCCEEEEEEECCCC SPALPDVPTMQEAGLKGFEVVGFYGMLAPAGTPREVVSRLSGALRTVLADPDTKAKLEQQ CCCCCCCCCHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHC GAEPAWQSPEAFAATITAEQKRWGQAVKASGASID CCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDKTKNKPQARRDILRHALLALAAAPLALAAGTAQAAWPEKPIRLVVAFPPGGPVDTHAR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHH LLAEKLQPILGQTIVIDYKAGAAGNIGSDNVAKSAPDGYTLLLANTGQMAINNSLYPKLP HHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHCCCCCCEEEEEECCCCEEECCCCCCCCC YSMPKDFAPVARTALIPLVMVVNNNVPARDLKAFISYAKANPGKLNFASGGNGGISHLMP CCCCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH EMFKQASGTFIVHIPYKGSSPALTDVMGGQAQMMADSIPLFTQYIKAGKVRALAVTSPQR HHHHHCCCCEEEEEECCCCCCCHHHHCCCHHHHHHHCCHHHHHHHHCCCEEEEEEECCCC SPALPDVPTMQEAGLKGFEVVGFYGMLAPAGTPREVVSRLSGALRTVLADPDTKAKLEQQ CCCCCCCCCHHHCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHC GAEPAWQSPEAFAATITAEQKRWGQAVKASGASID CCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]