| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694709
Identifier: 116694709
GI number: 116694709
Start: 856728
End: 857171
Strand: Direct
Name: 116694709
Synonym: H16_B0758
Alternate gene names: NA
Gene position: 856728-857171 (Clockwise)
Preceding gene: 116694708
Following gene: 116694710
Centisome position: 29.42
GC content: 68.92
Gene sequence:
>444_bases ATGACCCAGGCCATCGCCGCGCCGGGCGAAGCTGCCGGCGGGGACGTGCCGGAGGGCTTCGTCCCGCTGCGCAGCATGAG CGGCTACATGGCAGGTTTCGGCCAGCTCTACCTGCATGCGGAGCGCCGCACGCTGGCGGTGCGCATCGACGAGAGTCACC TGAATAACCTGGGCATCCCGCACGGCGGCATGCTGGCGACGCTGGCCGATACCGCCATCGGCATGATGATGTCGCTGGAA ACCGGGCGCTCCAAAAGCGCGGTGACCGTCAACCTGAGCCTGGACTACCTGGATTCCGCGCGCCTGGGCGACTGGGTCGA GGCCCGCGTGGAGTTCGACAAGCTCGGCTCGCGCCTGCGCTATGGCACCTGCCGGCTGGTCAGTGGCGAGCGCTGCCTGC TGCGCGCGACCGCAATCTTTGCAGTGCTGGCGCCGCGCACCTGA
Upstream 100 bases:
>100_bases GAACTGATCACGCGCATGGTGGCCGATTGCCGAGAGCACCTCAGCGTGGCTTCGCGCTTCTTTGCCTGACGCCATGGCCG AGGCTGAAATCGAGCGGGCG
Downstream 100 bases:
>100_bases GGCCTGCGGCAAACTTCGTCGCTTCCGACGACGCTTGCCACCACCCGCGGCGCAACAATGCAAAGCGACACTGCCGGCGC CAGATGCCGGCACTCCGGAC
Product: phenylacetic acid degradation protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTQAIAAPGEAAGGDVPEGFVPLRSMSGYMAGFGQLYLHAERRTLAVRIDESHLNNLGIPHGGMLATLADTAIGMMMSLE TGRSKSAVTVNLSLDYLDSARLGDWVEARVEFDKLGSRLRYGTCRLVSGERCLLRATAIFAVLAPRT
Sequences:
>Translated_147_residues MTQAIAAPGEAAGGDVPEGFVPLRSMSGYMAGFGQLYLHAERRTLAVRIDESHLNNLGIPHGGMLATLADTAIGMMMSLE TGRSKSAVTVNLSLDYLDSARLGDWVEARVEFDKLGSRLRYGTCRLVSGERCLLRATAIFAVLAPRT >Mature_146_residues TQAIAAPGEAAGGDVPEGFVPLRSMSGYMAGFGQLYLHAERRTLAVRIDESHLNNLGIPHGGMLATLADTAIGMMMSLET GRSKSAVTVNLSLDYLDSARLGDWVEARVEFDKLGSRLRYGTCRLVSGERCLLRATAIFAVLAPRT
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioesterase PaaI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003736 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 15772; Mature: 15641
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAIAAPGEAAGGDVPEGFVPLRSMSGYMAGFGQLYLHAERRTLAVRIDESHLNNLGIP CCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCEEEEEEECCEEEEEEECHHHHCCCCCC HGGMLATLADTAIGMMMSLETGRSKSAVTVNLSLDYLDSARLGDWVEARVEFDKLGSRLR CCCHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHEECHHHHCCCCC YGTCRLVSGERCLLRATAIFAVLAPRT CCEEEEECCCCHHHHHHHHHHEECCCC >Mature Secondary Structure TQAIAAPGEAAGGDVPEGFVPLRSMSGYMAGFGQLYLHAERRTLAVRIDESHLNNLGIP CCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCEEEEEEECCEEEEEEECHHHHCCCCCC HGGMLATLADTAIGMMMSLETGRSKSAVTVNLSLDYLDSARLGDWVEARVEFDKLGSRLR CCCHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHEECHHHHCCCCC YGTCRLVSGERCLLRATAIFAVLAPRT CCEEEEECCCCHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]