| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is hcrA [H]
Identifier: 116694694
GI number: 116694694
Start: 837755
End: 840046
Strand: Direct
Name: hcrA [H]
Synonym: H16_B0743
Alternate gene names: 116694694
Gene position: 837755-840046 (Clockwise)
Preceding gene: 116694693
Following gene: 116694695
Centisome position: 28.76
GC content: 69.42
Gene sequence:
>2292_bases ATGAGCAAGGCCATCGTGGGAAGCTCCACGCCGCAGGTGACCGCGCGGGAAAAGGTCATGGGGCGCGCGCAGTATGCCGG CGACATCAAGTTGCCCGGCATGCTGCATGCCAAGGTGCTGCGCAGCCCACACCCGCATGCGCGCATCGTGCGCATCGACA CCTCCGCGGCGAAGGCGCTGCCCGGCGTCAAGCTGGTGGTGACCGGGCACGATGTGCCCGCCCGCAACTGGGGCCCGCAC CGCAAGGAGCAGCGCATCCTGGCCTGCGGCGTGGTGCGCCACGTCGGCGAGGAAGTGGCCGCGGTGGTGGCGGTCAGCGA GGAGATCGCGCGTGATGCGCTGGACCTGGTCCGCATCGAGTACGAGGCGCTGCCCGCGCTGCTGACGCCGGAAGCGGCGC TGGCCGATGGCGCGCCCGAGATCCATGCCGGCACGCGCAATATCGGCCATGAGATGCACATCGTGCGGGGCGACGTGGAT GCCGCGTTCGAAGCCTGCGCCGCAGTGTATGAGGCCACCTACGACATGCACTCGCAGTACCCGGGCTACCTTGAGCCGAT GGCCTCGGTGGCGGCGCAGGACGGCAACGGGCGGCTCACGCTGTGGGCCTCGACCCAGTCCGTGTTCCTGGCGCGCGCGC GGCTGGCCGAGGCGCTGGACCGGCCGGTCTCGACCATCCGCGTGGTGCAGGCGACCACCGGCGGCGGCTTCGGCGCCAAG ATCGTCGAGGAGAACAACAGCCTGATCTGCGCCTTCCTGGCCAGCCGGCTGGAGCGCCCGGTGCGGCTGGTCAACAACCG GCTGGAAGACTTCCAGGGCGCGCGCGCCAGCGTGCCGATGAAAGTGTGGCTGCGCATGGGGCTGTCCGCAGACGGCGTGA TCCTGGCCAAGGATGTGCGCATCGCGGCCGAATGCGGCGCCTACTCCGGGCTTGCCGGTGATGTGATGCACGTCACCGCC ATGCGCAGCGACAACATGCACCGCGTGCAGAACGTGCGCTCGCATGCGGTCATGGCCTATACCAACAACCCGCCGCGCGG CGCCTTCCGCGGCTTTGGCGGGCAGCAGATGCAGTTTCCGCTGAACTGCCACCTGACCGTGCTGGCCGGCATGCTCGGCA TGGACCCGGTGGAGGTGCACAAGCGCAATGCGATCGGCGCGGGCGAGACCAGCGTGCATGGCTGGAAGATCAGCAGCACC GGCATGGCCGAGTGCCTGGAAATGACCCGCAAGGCCATCGGCTGGGACGAGAAGCGCGCCGCGCCGCGCGGCACCGGCAC GCGCCGGCGCGGCGTGGGCATTGCCGCGGCCATGCACGTCAGCGGCAACCGCACGCTGGGCAACTGGGACGGCTCGACCA TCCTGCTCAAGATCAACGAGGACGGGCGCGCGATGCTGCAGACCAGCGAGTGCGACATGGGGCAGGGCGCCAACACCATG CTCAGCCAGATCTGCGCGCAGGAGCTCGGCATCCCGCTGTCGCACGTGACCGTGATGGCGCCGGATACCGATACCGCGCC GTTCTGCCTGGGCTCGCTGGCGTCGCGCGTGACCATCATCGCCGGCAATGCGTTGCTGCGTGCCGCGCGCGAGGCGCGCC AGAAACTGCTGGCACTCGCGGCGGAGAAGCTTGGCGTGGACGCGGAACAACTGGCGATTGCCGATGGCCGCATCGCCGCG CCGGGCCAGCCCGACAAGTCCGCCACGCTGGCGGAGATCGCGCGGCTGCATATCTTCCGCCACGGCGGCGAGGGCATCCA CGTGCGCGCCACCTATGACGCGCCCACGGTGATGCACGACGCCGACTACTACGGCAACGTCGCGCCCGCGCACTCCTTCG CGGCACAGGCGGTGGAAGTGGAAGTCGACACCAGCACCGGCCAGGTCACCGTGATCGACAGCTTTGTCGCCGACGACTGC GGCAAGGCCATCAACCCGCTCGCCGTGCACGGCCAGACCCACGGCGCGACCGTGCAGGCGATCGGCTGGACCCTGTACGA GAACCTGCAATACGAGGATGGCCGCCTGATGAACGGCAACTTTGCCGACTACACCATGCCGACCGCCGACGCGGTGCCGA TGCTGCGCACCGACGTGGTGGAATCGAACGACCCCAACGGCCCCTATGGCGCCAAGGGCGCCAGCGAAACCGCGATCCTG CCGGGCGCGGCGGCGATCGCCAATGCCGTCTTCGACGCCGTGGGCGTGCGCATCCAGTCGCTGCCGATCACGCCGGAGAA GGTGCTGGCGGGCCTGCGCGAACTGAAGCAGAAGGAGGCCGTCCATGCGTGA
Upstream 100 bases:
>100_bases TACGAGCGGCTGGGCAAGGTGATCCGCGACCTCGCGATCACGGCGGAATGACGCAGGGCAGCGCATCGCGTTCATGCAAC CAGACAAGCAGGAGGCCGGC
Downstream 100 bases:
>100_bases CTTTGCCTTCCTTGAGCCGGCCACCGTGGCCGAGGCCAGCCAGATGCTGGCCGAGCTGGGCGACAGTTGCCGCATCCTTG CCGGCGGCACCGCGCTGATG
Product: 4-hydroxybenzoyl-CoA reductase molybdopterin-binding subunit A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 763; Mature: 762
Protein sequence:
>763_residues MSKAIVGSSTPQVTAREKVMGRAQYAGDIKLPGMLHAKVLRSPHPHARIVRIDTSAAKALPGVKLVVTGHDVPARNWGPH RKEQRILACGVVRHVGEEVAAVVAVSEEIARDALDLVRIEYEALPALLTPEAALADGAPEIHAGTRNIGHEMHIVRGDVD AAFEACAAVYEATYDMHSQYPGYLEPMASVAAQDGNGRLTLWASTQSVFLARARLAEALDRPVSTIRVVQATTGGGFGAK IVEENNSLICAFLASRLERPVRLVNNRLEDFQGARASVPMKVWLRMGLSADGVILAKDVRIAAECGAYSGLAGDVMHVTA MRSDNMHRVQNVRSHAVMAYTNNPPRGAFRGFGGQQMQFPLNCHLTVLAGMLGMDPVEVHKRNAIGAGETSVHGWKISST GMAECLEMTRKAIGWDEKRAAPRGTGTRRRGVGIAAAMHVSGNRTLGNWDGSTILLKINEDGRAMLQTSECDMGQGANTM LSQICAQELGIPLSHVTVMAPDTDTAPFCLGSLASRVTIIAGNALLRAAREARQKLLALAAEKLGVDAEQLAIADGRIAA PGQPDKSATLAEIARLHIFRHGGEGIHVRATYDAPTVMHDADYYGNVAPAHSFAAQAVEVEVDTSTGQVTVIDSFVADDC GKAINPLAVHGQTHGATVQAIGWTLYENLQYEDGRLMNGNFADYTMPTADAVPMLRTDVVESNDPNGPYGAKGASETAIL PGAAAIANAVFDAVGVRIQSLPITPEKVLAGLRELKQKEAVHA
Sequences:
>Translated_763_residues MSKAIVGSSTPQVTAREKVMGRAQYAGDIKLPGMLHAKVLRSPHPHARIVRIDTSAAKALPGVKLVVTGHDVPARNWGPH RKEQRILACGVVRHVGEEVAAVVAVSEEIARDALDLVRIEYEALPALLTPEAALADGAPEIHAGTRNIGHEMHIVRGDVD AAFEACAAVYEATYDMHSQYPGYLEPMASVAAQDGNGRLTLWASTQSVFLARARLAEALDRPVSTIRVVQATTGGGFGAK IVEENNSLICAFLASRLERPVRLVNNRLEDFQGARASVPMKVWLRMGLSADGVILAKDVRIAAECGAYSGLAGDVMHVTA MRSDNMHRVQNVRSHAVMAYTNNPPRGAFRGFGGQQMQFPLNCHLTVLAGMLGMDPVEVHKRNAIGAGETSVHGWKISST GMAECLEMTRKAIGWDEKRAAPRGTGTRRRGVGIAAAMHVSGNRTLGNWDGSTILLKINEDGRAMLQTSECDMGQGANTM LSQICAQELGIPLSHVTVMAPDTDTAPFCLGSLASRVTIIAGNALLRAAREARQKLLALAAEKLGVDAEQLAIADGRIAA PGQPDKSATLAEIARLHIFRHGGEGIHVRATYDAPTVMHDADYYGNVAPAHSFAAQAVEVEVDTSTGQVTVIDSFVADDC GKAINPLAVHGQTHGATVQAIGWTLYENLQYEDGRLMNGNFADYTMPTADAVPMLRTDVVESNDPNGPYGAKGASETAIL PGAAAIANAVFDAVGVRIQSLPITPEKVLAGLRELKQKEAVHA >Mature_762_residues SKAIVGSSTPQVTAREKVMGRAQYAGDIKLPGMLHAKVLRSPHPHARIVRIDTSAAKALPGVKLVVTGHDVPARNWGPHR KEQRILACGVVRHVGEEVAAVVAVSEEIARDALDLVRIEYEALPALLTPEAALADGAPEIHAGTRNIGHEMHIVRGDVDA AFEACAAVYEATYDMHSQYPGYLEPMASVAAQDGNGRLTLWASTQSVFLARARLAEALDRPVSTIRVVQATTGGGFGAKI VEENNSLICAFLASRLERPVRLVNNRLEDFQGARASVPMKVWLRMGLSADGVILAKDVRIAAECGAYSGLAGDVMHVTAM RSDNMHRVQNVRSHAVMAYTNNPPRGAFRGFGGQQMQFPLNCHLTVLAGMLGMDPVEVHKRNAIGAGETSVHGWKISSTG MAECLEMTRKAIGWDEKRAAPRGTGTRRRGVGIAAAMHVSGNRTLGNWDGSTILLKINEDGRAMLQTSECDMGQGANTML SQICAQELGIPLSHVTVMAPDTDTAPFCLGSLASRVTIIAGNALLRAAREARQKLLALAAEKLGVDAEQLAIADGRIAAP GQPDKSATLAEIARLHIFRHGGEGIHVRATYDAPTVMHDADYYGNVAPAHSFAAQAVEVEVDTSTGQVTVIDSFVADDCG KAINPLAVHGQTHGATVQAIGWTLYENLQYEDGRLMNGNFADYTMPTADAVPMLRTDVVESNDPNGPYGAKGASETAILP GAAAIANAVFDAVGVRIQSLPITPEKVLAGLRELKQKEAVHA
Specific function: Catalyzes reductive dehydroxylation of 4-hydroxybenzoyl- CoA. Reaction is not reversible [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To xanthine oxidases [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=771, Percent_Identity=26.0700389105058, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI71773480, Length=775, Percent_Identity=24.7741935483871, Blast_Score=170, Evalue=4e-42, Organism=Escherichia coli, GI1789230, Length=765, Percent_Identity=34.1176470588235, Blast_Score=361, Evalue=1e-101, Organism=Escherichia coli, GI1789246, Length=814, Percent_Identity=29.1154791154791, Blast_Score=286, Evalue=3e-78, Organism=Escherichia coli, GI1786478, Length=768, Percent_Identity=28.6458333333333, Blast_Score=201, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17540638, Length=771, Percent_Identity=23.7354085603113, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17539860, Length=738, Percent_Identity=25.0677506775068, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI32566215, Length=729, Percent_Identity=23.8683127572016, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI17737937, Length=740, Percent_Identity=26.4864864864865, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI24647193, Length=727, Percent_Identity=23.3837689133425, Blast_Score=113, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017607 - InterPro: IPR000674 - InterPro: IPR008274 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.20 [H]
Molecular weight: Translated: 81200; Mature: 81068
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAIVGSSTPQVTAREKVMGRAQYAGDIKLPGMLHAKVLRSPHPHARIVRIDTSAAKAL CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEECHHHHHC PGVKLVVTGHDVPARNWGPHRKEQRILACGVVRHVGEEVAAVVAVSEEIARDALDLVRIE CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEALPALLTPEAALADGAPEIHAGTRNIGHEMHIVRGDVDAAFEACAAVYEATYDMHSQY HHHCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCC PGYLEPMASVAAQDGNGRLTLWASTQSVFLARARLAEALDRPVSTIRVVQATTGGGFGAK CCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEE IVEENNSLICAFLASRLERPVRLVNNRLEDFQGARASVPMKVWLRMGLSADGVILAKDVR EEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEECCE IAAECGAYSGLAGDVMHVTAMRSDNMHRVQNVRSHAVMAYTNNPPRGAFRGFGGQQMQFP EEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCEEEEEECCCCCCHHCCCCCCEEEEC LNCHLTVLAGMLGMDPVEVHKRNAIGAGETSVHGWKISSTGMAECLEMTRKAIGWDEKRA CCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHC APRGTGTRRRGVGIAAAMHVSGNRTLGNWDGSTILLKINEDGRAMLQTSECDMGQGANTM CCCCCCCCCCCCEEEEEEEECCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHH LSQICAQELGIPLSHVTVMAPDTDTAPFCLGSLASRVTIIAGNALLRAAREARQKLLALA HHHHHHHHHCCCCHHEEEECCCCCCCHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHH AEKLGVDAEQLAIADGRIAAPGQPDKSATLAEIARLHIFRHGGEGIHVRATYDAPTVMHD HHHHCCCHHHEEEECCEECCCCCCCCCHHHHHHHHHHHEEECCCEEEEEEECCCCCEEEC ADYYGNVAPAHSFAAQAVEVEVDTSTGQVTVIDSFVADDCGKAINPLAVHGQTHGATVQA CCCCCCCCCHHHHHCEEEEEEEECCCCEEEEEEHHHHHHHHHCCCCEEEECCCCCCEEEE IGWTLYENLQYEDGRLMNGNFADYTMPTADAVPMLRTDVVESNDPNGPYGAKGASETAIL EHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEC PGAAAIANAVFDAVGVRIQSLPITPEKVLAGLRELKQKEAVHA CCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKAIVGSSTPQVTAREKVMGRAQYAGDIKLPGMLHAKVLRSPHPHARIVRIDTSAAKAL CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEECHHHHHC PGVKLVVTGHDVPARNWGPHRKEQRILACGVVRHVGEEVAAVVAVSEEIARDALDLVRIE CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YEALPALLTPEAALADGAPEIHAGTRNIGHEMHIVRGDVDAAFEACAAVYEATYDMHSQY HHHCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCC PGYLEPMASVAAQDGNGRLTLWASTQSVFLARARLAEALDRPVSTIRVVQATTGGGFGAK CCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEE IVEENNSLICAFLASRLERPVRLVNNRLEDFQGARASVPMKVWLRMGLSADGVILAKDVR EEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEECCE IAAECGAYSGLAGDVMHVTAMRSDNMHRVQNVRSHAVMAYTNNPPRGAFRGFGGQQMQFP EEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCEEEEEECCCCCCHHCCCCCCEEEEC LNCHLTVLAGMLGMDPVEVHKRNAIGAGETSVHGWKISSTGMAECLEMTRKAIGWDEKRA CCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHC APRGTGTRRRGVGIAAAMHVSGNRTLGNWDGSTILLKINEDGRAMLQTSECDMGQGANTM CCCCCCCCCCCCEEEEEEEECCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHH LSQICAQELGIPLSHVTVMAPDTDTAPFCLGSLASRVTIIAGNALLRAAREARQKLLALA HHHHHHHHHCCCCHHEEEECCCCCCCHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHH AEKLGVDAEQLAIADGRIAAPGQPDKSATLAEIARLHIFRHGGEGIHVRATYDAPTVMHD HHHHCCCHHHEEEECCEECCCCCCCCCHHHHHHHHHHHEEECCCEEEEEEECCCCCEEEC ADYYGNVAPAHSFAAQAVEVEVDTSTGQVTVIDSFVADDCGKAINPLAVHGQTHGATVQA CCCCCCCCCHHHHHCEEEEEEEECCCCEEEEEEHHHHHHHHHCCCCEEEECCCCCCEEEE IGWTLYENLQYEDGRLMNGNFADYTMPTADAVPMLRTDVVESNDPNGPYGAKGASETAIL EHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEC PGAAAIANAVFDAVGVRIQSLPITPEKVLAGLRELKQKEAVHA CCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]