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The map label for this gene is ycdJ [C]

Identifier: 116694679

GI number: 116694679

Start: 822525

End: 823409

Strand: Direct

Name: ycdJ [C]

Synonym: H16_B0728

Alternate gene names: 116694679

Gene position: 822525-823409 (Clockwise)

Preceding gene: 116694675

Following gene: 116694680

Centisome position: 28.24

GC content: 73.11

Gene sequence:

>885_bases
ATGGAACAAAATCAGCCCCACATCCTGGCCGAGCCAGACCGGCAGTTGCTGGAAGCCCTCGACAGCGGGTTTGCCCAGCG
CGTGGTGCAGGTGGGCGCGGACGGCGAGCGCGTGGCTTACCGCAGCGGCGGGAGCACGGGCCCTGCGGTCGTGCTGCTGC
ACGGCATCAGTTCCGGGGCGGCGTCGTGGCTGCCGTGCGCGAGCCTGCTGGCCGCGCACGCGCGGGTGATCGCCTGGGAT
GCGCCGGGCTATGGCGATTCGTCGCCGCTGCCGCAGGCGCGGCCGCTGGCGTCGGACTACGCGCAGCGGCTGGACCGGCT
GCTGCAGGCACTGGGCGTGCAGCCGGCGTTGATCGTCGGGCATTCGCTGGGCGCGCTGATGGCGGCGGCCTATGTTGCCA
ACGCGCGCCAGCTGCCCGCGCGCCTGCTGTTGCTCAGCGTGGCGCAAGGCTACGGCGGCGCGGGCAGGGAGGCGCAGGCA
AGGGAAGTGGCGCGGCAGCGGCTGGAGGCGCTGGAATCCCTGGGCGTTGATGGCCTGGCGCAACGCGGCCCGGCCCGGCT
GCTGAGCGAGGAAGCCGACCCCGGCGCCCAGGCATGGGTGCGCTGGAACATGCAGCGGCTGAACCCGGACGGCTACCGCC
AGGCGGTGGCGATGCTGTGCGGCGACGACATCCACGCCTACCTGGCGCGGCGCCCCGATGCCTTGCCCACGCAGATCGCC
TGCGGCAGCCGCGATGTCGTCACCACGCCGCCAGCCTGCGGCACGCTGGCCGAACGCTTCGGCCTGCCGTTCTCGCTGAT
CCCCGATGCCGGCCACGCCTGCTATATCGACCAGGCCGCCGCCACCGCGCGGCTGATCCGCTCGGTGCTGGACGACGCCA
CCTGA

Upstream 100 bases:

>100_bases
GCGCGGAGGTTTCCGATCTTTCTATCGTTAACCCTCATCCCGGCTGGGCTCCGACACGCCTATGCTTCAAAAGTTTTATT
CTCAAACCTAAGTTTTATAT

Downstream 100 bases:

>100_bases
AGCCACCGCGGCGGCGCCTGCCGCCGCATCCCGAGCGGTGTCGCGCAGCTTGCGCCACCCGTTCCAGATTTCGTATGCCG
ATCGCGGGTTAACCCCAGTC

Product: alpha/beta superfamily hydrolase/acyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MEQNQPHILAEPDRQLLEALDSGFAQRVVQVGADGERVAYRSGGSTGPAVVLLHGISSGAASWLPCASLLAAHARVIAWD
APGYGDSSPLPQARPLASDYAQRLDRLLQALGVQPALIVGHSLGALMAAAYVANARQLPARLLLLSVAQGYGGAGREAQA
REVARQRLEALESLGVDGLAQRGPARLLSEEADPGAQAWVRWNMQRLNPDGYRQAVAMLCGDDIHAYLARRPDALPTQIA
CGSRDVVTTPPACGTLAERFGLPFSLIPDAGHACYIDQAAATARLIRSVLDDAT

Sequences:

>Translated_294_residues
MEQNQPHILAEPDRQLLEALDSGFAQRVVQVGADGERVAYRSGGSTGPAVVLLHGISSGAASWLPCASLLAAHARVIAWD
APGYGDSSPLPQARPLASDYAQRLDRLLQALGVQPALIVGHSLGALMAAAYVANARQLPARLLLLSVAQGYGGAGREAQA
REVARQRLEALESLGVDGLAQRGPARLLSEEADPGAQAWVRWNMQRLNPDGYRQAVAMLCGDDIHAYLARRPDALPTQIA
CGSRDVVTTPPACGTLAERFGLPFSLIPDAGHACYIDQAAATARLIRSVLDDAT
>Mature_294_residues
MEQNQPHILAEPDRQLLEALDSGFAQRVVQVGADGERVAYRSGGSTGPAVVLLHGISSGAASWLPCASLLAAHARVIAWD
APGYGDSSPLPQARPLASDYAQRLDRLLQALGVQPALIVGHSLGALMAAAYVANARQLPARLLLLSVAQGYGGAGREAQA
REVARQRLEALESLGVDGLAQRGPARLLSEEADPGAQAWVRWNMQRLNPDGYRQAVAMLCGDDIHAYLARRPDALPTQIA
CGSRDVVTTPPACGTLAERFGLPFSLIPDAGHACYIDQAAATARLIRSVLDDAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 31034; Mature: 31034

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQNQPHILAEPDRQLLEALDSGFAQRVVQVGADGERVAYRSGGSTGPAVVLLHGISSGA
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCC
ASWLPCASLLAAHARVIAWDAPGYGDSSPLPQARPLASDYAQRLDRLLQALGVQPALIVG
CHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
HSLGALMAAAYVANARQLPARLLLLSVAQGYGGAGREAQAREVARQRLEALESLGVDGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
QRGPARLLSEEADPGAQAWVRWNMQRLNPDGYRQAVAMLCGDDIHAYLARRPDALPTQIA
HCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHC
CGSRDVVTTPPACGTLAERFGLPFSLIPDAGHACYIDQAAATARLIRSVLDDAT
CCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQNQPHILAEPDRQLLEALDSGFAQRVVQVGADGERVAYRSGGSTGPAVVLLHGISSGA
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCCCC
ASWLPCASLLAAHARVIAWDAPGYGDSSPLPQARPLASDYAQRLDRLLQALGVQPALIVG
CHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
HSLGALMAAAYVANARQLPARLLLLSVAQGYGGAGREAQAREVARQRLEALESLGVDGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
QRGPARLLSEEADPGAQAWVRWNMQRLNPDGYRQAVAMLCGDDIHAYLARRPDALPTQIA
HCCHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHC
CGSRDVVTTPPACGTLAERFGLPFSLIPDAGHACYIDQAAATARLIRSVLDDAT
CCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]