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The map label for this gene is yecD [C]

Identifier: 116694574

GI number: 116694574

Start: 695892

End: 696473

Strand: Direct

Name: yecD [C]

Synonym: H16_B0623

Alternate gene names: 116694574

Gene position: 695892-696473 (Clockwise)

Preceding gene: 116694573

Following gene: 116694579

Centisome position: 23.89

GC content: 59.97

Gene sequence:

>582_bases
ATGTCGCCACCCGTTGAGATTCCGGCAATTGTTCCCGCGCAAACCGCGCTGGTGGTCATGCATTATCAGACCGACATCCT
GGCGCTATTTCCCTCGGTCGCGCCCACTCTGCTCTCCAACACGCGCAAGCTGTGTGACGCCGCGCGGGCCAGGGGCGTCA
GCGTTTATTTTGCCAAGATCCACTTTGCTCCAGGCTATCCGGAAGTCAGTCCGTTGAACCGGAACGGGCAGGGAATCAAG
CAGCTTGGTCTTTTCGTCGACGACCAGATCTCGCCGGAACTCGGCCAGCAGGCCACCGAGCCGCTGATCATCGCGCATCG
CGCCAGCGTGTTCTTTGGTACTGACCTGCAGGTACGGCTTTCCGCGCAGGGTATCGATACCCTGCTCATGGTGGGCATTG
CTTCGACCGGTGTGGTGCTGTCGTCGGTCGCCTATGCGAGCGATGCGGACTTCCGGCTATTCACGGTCAAGGATTGCTGC
TACGACCCGGATCAGGTCGTGCACGACCATCTCTTTTCAACGGCGTTCGATTCGCGCACAACGGTGCTTTCGCTCGCTGA
TGCCTTGCGCTTGCTTGCCTAG

Upstream 100 bases:

>100_bases
CGTTCGCTGACGATCCCACGGCCAACTTCCGTAGACGACCCAGAACGGCCAACCGATTGGTCGTGGTAGAGTCGACCATC
ATTTCTTATCGTGTAGCCTT

Downstream 100 bases:

>100_bases
CATTTCGACCTGCCAGGAGTGCCGCCGCGCCATCTCTCAGGCAGACGGGAAGAGCAGATGATCGGTCAGGTTGCCCTTCA
GATCGAGCATCGAATAATTC

Product: amidase related to nicotinamidase

Products: NA

Alternate protein names: Isochorismatase; Pyrimidine Utilization Protein B; Isochorismatase Family Protein; Isochorismatase-Family Hydrolase; Isochorismatase Hydrolase Family Protein; Amidase; Hydrolase Protein; Amidase Related Nicotinamidase; Isochorismatase Family; Isochorismatase Family Hydrolase; N-Carbamoylsarcosine Amidase; Hydrolase; Isochorismate Hydrolase

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSPPVEIPAIVPAQTALVVMHYQTDILALFPSVAPTLLSNTRKLCDAARARGVSVYFAKIHFAPGYPEVSPLNRNGQGIK
QLGLFVDDQISPELGQQATEPLIIAHRASVFFGTDLQVRLSAQGIDTLLMVGIASTGVVLSSVAYASDADFRLFTVKDCC
YDPDQVVHDHLFSTAFDSRTTVLSLADALRLLA

Sequences:

>Translated_193_residues
MSPPVEIPAIVPAQTALVVMHYQTDILALFPSVAPTLLSNTRKLCDAARARGVSVYFAKIHFAPGYPEVSPLNRNGQGIK
QLGLFVDDQISPELGQQATEPLIIAHRASVFFGTDLQVRLSAQGIDTLLMVGIASTGVVLSSVAYASDADFRLFTVKDCC
YDPDQVVHDHLFSTAFDSRTTVLSLADALRLLA
>Mature_192_residues
SPPVEIPAIVPAQTALVVMHYQTDILALFPSVAPTLLSNTRKLCDAARARGVSVYFAKIHFAPGYPEVSPLNRNGQGIKQ
LGLFVDDQISPELGQQATEPLIIAHRASVFFGTDLQVRLSAQGIDTLLMVGIASTGVVLSSVAYASDADFRLFTVKDCCY
DPDQVVHDHLFSTAFDSRTTVLSLADALRLLA

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20801; Mature: 20670

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPVEIPAIVPAQTALVVMHYQTDILALFPSVAPTLLSNTRKLCDAARARGVSVYFAKI
CCCCCCCCEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE
HFAPGYPEVSPLNRNGQGIKQLGLFVDDQISPELGQQATEPLIIAHRASVFFGTDLQVRL
EECCCCCCCCCCCCCCCCHHHHCCEECCCCCHHHHHHCCCCEEEEEECEEEECCCEEEEE
SAQGIDTLLMVGIASTGVVLSSVAYASDADFRLFTVKDCCYDPDQVVHDHLFSTAFDSRT
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHH
TVLSLADALRLLA
HHHHHHHHHHHCC
>Mature Secondary Structure 
SPPVEIPAIVPAQTALVVMHYQTDILALFPSVAPTLLSNTRKLCDAARARGVSVYFAKI
CCCCCCCEECCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE
HFAPGYPEVSPLNRNGQGIKQLGLFVDDQISPELGQQATEPLIIAHRASVFFGTDLQVRL
EECCCCCCCCCCCCCCCCHHHHCCEECCCCCHHHHHHCCCCEEEEEECEEEECCCEEEEE
SAQGIDTLLMVGIASTGVVLSSVAYASDADFRLFTVKDCCYDPDQVVHDHLFSTAFDSRT
ECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHH
TVLSLADALRLLA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA