| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is yxjM [H]
Identifier: 116694573
GI number: 116694573
Start: 693770
End: 695716
Strand: Direct
Name: yxjM [H]
Synonym: H16_B0622
Alternate gene names: 116694573
Gene position: 693770-695716 (Clockwise)
Preceding gene: 116694572
Following gene: 116694574
Centisome position: 23.82
GC content: 63.64
Gene sequence:
>1947_bases TTGGGCGCCACGCTCCTCGCCGGCGCTGCAAACGCGCAGGAAGGGCCGGGCGCCACCGCCTTTACCCGCATAGAGGCTGC CCGATCGACCTGGCAGGGTGATAGCCCGCCGGCGGCGGGCTGGGTCCCAGTGAAGCTGCCGGACGACTGGTCCTCGCGCT GGCCCGATTTCGACGGCGTGGTCTGGTACCGGCTGAGCTGGCAGTGCGCAGATGCAAGCCAACCCACGGCGCTGATGCTC GCTTACCTGAATATGGCGGGGGCGGTTTATCTCAACGGCAGCTTGCTGATGCGTGACGCGAGCCTCGTCGAACCGCTCAC GCGAGCCTGGAATACTCCCCGTTATCAGTTGATATCTCCGCCGTTGCTGCGGGAGGGCACCAACACGCTGCTGATTCGCG TCTCGGGGCTGTCGGCATACCAACCCGGCCTTGGACCAGTATCGGTCGCCGACCCGGACCGCCTGCGGGCCGCTTACGAA CAGGCCTACCGGCTGCGTCATGACCTGCAGTTGGTCAGCCTTGCAATCACCGTCGCGCTAGGTTGCTTCTTCTTTTCGCT CTGGGTGATGCGCCGGCAAGAAGTGACCTACGGATGGTTCAGCCTGATGTCGCTGGCCTGGTGGTGGGTGGCGCTGAATC AGGTGGCGACGAGCACCTGGCCGTTTGCCAGTACCGATGCCTGGGGGCGCGCAAATATCATCGCGCTGCTCATCTACAGT GCTGCCTTCACGATGTCCATGGTGCGCTTCTGCGAACGGCGCCTGCCGCGCATCGAAGCGGTGCTCTGGACGCTGGTAGT GTTGGGCGCCGCCGTCATGCTCGGGGCGCCGCACGGTTACCTGACCGACGTGCGCAACACGCTGACGGTGGGACTGGCGT GCAATTTCTTCGCGACGTGCCTCGTATTTCTCTGCTTTGCCGGGCGCAGTGGTCGCACCGACCATCGCATCCTCTCGTTT TGCATTGCAATTTTCCTTGTCGCCGCGGTACACGACCTGCTGAGCTTTCTTGGCATCCTCAAGGACAACCTCTACTACGC GGCCCTCACTTCGCAGTTCCAGATGATCGCCATGGCGCTGGTGCTGGCCTGGCGCTTCGTCGCCAACCTGCGCCGCATTG AACGATTCAATGACGAACTGCACTGCAAGATCGACGCGGCCAAGGCGGAGCTCGCAGCCAACCTGGATCGCCAGCGCGAG TTCGAAGTCGCCAATGCGCGGCTCAGTGAACGGCTCAATCTCGCACACGACCTGCACGACGGGCTCGGCGGCACGCTCGT CAGCGGAATTGCGACACTGGAGCGCATCCCTCACGACATCCCGCCAGGCCAGGTCCTGTCGATCCTCAAGGAGCTGCGCG ACGACCTGCGCATCATCATCGATACCACCTCCAGCCAGCAGTTTGGCGAGCACGCGCTGGCAGGTCAGATCGTGCCGCTG CGGCACCGTCTTACGCGGCTGTTCGAGAGCCACGACATCGAGTGCCGGTGGCAGCTCACTGGCCTCGATCAATGCTATCT GCCGACTTCGCAAATTCTTGATGTCATGAGGACCTTGCAAGAGGCGCTGACCAATGTGCTGAAGCACAGCAAGGCGAGTC GCGCGGACGTCGTCCTGCGCAATGATGCCCGGGGGCTGGAGCTGGTTGTCAGCGACAACGGAATGGGCTTCGAACCCGCC GCCATCGAACGGCATCCGGGCACCGGCATGCGCAGCATGCGCGCGCGTACCCGGCGTCTTGGCGGGACGCTCAGCGTGCG ATCCACAGGGGAGGGGACAATGCTGACCGTGCGTATCCCAATCGCGGCCGACACCCTTGGATCACCACTTGACCTGCAGC CCGGCCGATCCAGTGATCGAGTTCCTGACCCTGGCATTACCCCCCGTGGCCCAAAGCCTGCCGGCTTCGCCATAGAGACT GATCCTCCGGTTCAGGGCCAAGGTTAG
Upstream 100 bases:
>100_bases CGGTCGAATGCCACATCAGGAACATATACAAGAAGTTGGCCGTCCACTCCCGCACGCAGGCCGTTTTCGAAGCGCGTGCG CATGGCTTGTTGCGCTGATC
Downstream 100 bases:
>100_bases GCCGCCGGCGAGACGAACATAGTCAATGTTGAACGGGCTGCGGATGCATTCGAACCCTCGAAGCCGGGTGCAGGTCGTTC GCTGACGATCCCACGGCCAA
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MGATLLAGAANAQEGPGATAFTRIEAARSTWQGDSPPAAGWVPVKLPDDWSSRWPDFDGVVWYRLSWQCADASQPTALML AYLNMAGAVYLNGSLLMRDASLVEPLTRAWNTPRYQLISPPLLREGTNTLLIRVSGLSAYQPGLGPVSVADPDRLRAAYE QAYRLRHDLQLVSLAITVALGCFFFSLWVMRRQEVTYGWFSLMSLAWWWVALNQVATSTWPFASTDAWGRANIIALLIYS AAFTMSMVRFCERRLPRIEAVLWTLVVLGAAVMLGAPHGYLTDVRNTLTVGLACNFFATCLVFLCFAGRSGRTDHRILSF CIAIFLVAAVHDLLSFLGILKDNLYYAALTSQFQMIAMALVLAWRFVANLRRIERFNDELHCKIDAAKAELAANLDRQRE FEVANARLSERLNLAHDLHDGLGGTLVSGIATLERIPHDIPPGQVLSILKELRDDLRIIIDTTSSQQFGEHALAGQIVPL RHRLTRLFESHDIECRWQLTGLDQCYLPTSQILDVMRTLQEALTNVLKHSKASRADVVLRNDARGLELVVSDNGMGFEPA AIERHPGTGMRSMRARTRRLGGTLSVRSTGEGTMLTVRIPIAADTLGSPLDLQPGRSSDRVPDPGITPRGPKPAGFAIET DPPVQGQG
Sequences:
>Translated_648_residues MGATLLAGAANAQEGPGATAFTRIEAARSTWQGDSPPAAGWVPVKLPDDWSSRWPDFDGVVWYRLSWQCADASQPTALML AYLNMAGAVYLNGSLLMRDASLVEPLTRAWNTPRYQLISPPLLREGTNTLLIRVSGLSAYQPGLGPVSVADPDRLRAAYE QAYRLRHDLQLVSLAITVALGCFFFSLWVMRRQEVTYGWFSLMSLAWWWVALNQVATSTWPFASTDAWGRANIIALLIYS AAFTMSMVRFCERRLPRIEAVLWTLVVLGAAVMLGAPHGYLTDVRNTLTVGLACNFFATCLVFLCFAGRSGRTDHRILSF CIAIFLVAAVHDLLSFLGILKDNLYYAALTSQFQMIAMALVLAWRFVANLRRIERFNDELHCKIDAAKAELAANLDRQRE FEVANARLSERLNLAHDLHDGLGGTLVSGIATLERIPHDIPPGQVLSILKELRDDLRIIIDTTSSQQFGEHALAGQIVPL RHRLTRLFESHDIECRWQLTGLDQCYLPTSQILDVMRTLQEALTNVLKHSKASRADVVLRNDARGLELVVSDNGMGFEPA AIERHPGTGMRSMRARTRRLGGTLSVRSTGEGTMLTVRIPIAADTLGSPLDLQPGRSSDRVPDPGITPRGPKPAGFAIET DPPVQGQG >Mature_647_residues GATLLAGAANAQEGPGATAFTRIEAARSTWQGDSPPAAGWVPVKLPDDWSSRWPDFDGVVWYRLSWQCADASQPTALMLA YLNMAGAVYLNGSLLMRDASLVEPLTRAWNTPRYQLISPPLLREGTNTLLIRVSGLSAYQPGLGPVSVADPDRLRAAYEQ AYRLRHDLQLVSLAITVALGCFFFSLWVMRRQEVTYGWFSLMSLAWWWVALNQVATSTWPFASTDAWGRANIIALLIYSA AFTMSMVRFCERRLPRIEAVLWTLVVLGAAVMLGAPHGYLTDVRNTLTVGLACNFFATCLVFLCFAGRSGRTDHRILSFC IAIFLVAAVHDLLSFLGILKDNLYYAALTSQFQMIAMALVLAWRFVANLRRIERFNDELHCKIDAAKAELAANLDRQREF EVANARLSERLNLAHDLHDGLGGTLVSGIATLERIPHDIPPGQVLSILKELRDDLRIIIDTTSSQQFGEHALAGQIVPLR HRLTRLFESHDIECRWQLTGLDQCYLPTSQILDVMRTLQEALTNVLKHSKASRADVVLRNDARGLELVVSDNGMGFEPAA IERHPGTGMRSMRARTRRLGGTLSVRSTGEGTMLTVRIPIAADTLGSPLDLQPGRSSDRVPDPGITPRGPKPAGFAIETD PPVQGQG
Specific function: Probable member of the two-component regulatory system yxjM/yxjL. May activate yxjL by phosphorylation [H]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011712 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 71486; Mature: 71355
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGATLLAGAANAQEGPGATAFTRIEAARSTWQGDSPPAAGWVPVKLPDDWSSRWPDFDGV CCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCCCCCE VWYRLSWQCADASQPTALMLAYLNMAGAVYLNGSLLMRDASLVEPLTRAWNTPRYQLISP EEEEEEEEECCCCCCHHHHHHHHHHCCEEEECCEEEECCHHHHHHHHHHCCCCCEEECCC PLLREGTNTLLIRVSGLSAYQPGLGPVSVADPDRLRAAYEQAYRLRHDLQLVSLAITVAL HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCFFFSLWVMRRQEVTYGWFSLMSLAWWWVALNQVATSTWPFASTDAWGRANIIALLIYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH AAFTMSMVRFCERRLPRIEAVLWTLVVLGAAVMLGAPHGYLTDVRNTLTVGLACNFFATC HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LVFLCFAGRSGRTDHRILSFCIAIFLVAAVHDLLSFLGILKDNLYYAALTSQFQMIAMAL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VLAWRFVANLRRIERFNDELHCKIDAAKAELAANLDRQREFEVANARLSERLNLAHDLHD HHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH GLGGTLVSGIATLERIPHDIPPGQVLSILKELRDDLRIIIDTTSSQQFGEHALAGQIVPL CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCHHH RHRLTRLFESHDIECRWQLTGLDQCYLPTSQILDVMRTLQEALTNVLKHSKASRADVVLR HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE NDARGLELVVSDNGMGFEPAAIERHPGTGMRSMRARTRRLGGTLSVRSTGEGTMLTVRIP CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEE IAADTLGSPLDLQPGRSSDRVPDPGITPRGPKPAGFAIETDPPVQGQG EEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure GATLLAGAANAQEGPGATAFTRIEAARSTWQGDSPPAAGWVPVKLPDDWSSRWPDFDGV CCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCCCCCE VWYRLSWQCADASQPTALMLAYLNMAGAVYLNGSLLMRDASLVEPLTRAWNTPRYQLISP EEEEEEEEECCCCCCHHHHHHHHHHCCEEEECCEEEECCHHHHHHHHHHCCCCCEEECCC PLLREGTNTLLIRVSGLSAYQPGLGPVSVADPDRLRAAYEQAYRLRHDLQLVSLAITVAL HHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCFFFSLWVMRRQEVTYGWFSLMSLAWWWVALNQVATSTWPFASTDAWGRANIIALLIYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH AAFTMSMVRFCERRLPRIEAVLWTLVVLGAAVMLGAPHGYLTDVRNTLTVGLACNFFATC HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LVFLCFAGRSGRTDHRILSFCIAIFLVAAVHDLLSFLGILKDNLYYAALTSQFQMIAMAL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VLAWRFVANLRRIERFNDELHCKIDAAKAELAANLDRQREFEVANARLSERLNLAHDLHD HHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH GLGGTLVSGIATLERIPHDIPPGQVLSILKELRDDLRIIIDTTSSQQFGEHALAGQIVPL CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCHHH RHRLTRLFESHDIECRWQLTGLDQCYLPTSQILDVMRTLQEALTNVLKHSKASRADVVLR HHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE NDARGLELVVSDNGMGFEPAAIERHPGTGMRSMRARTRRLGGTLSVRSTGEGTMLTVRIP CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEE IAADTLGSPLDLQPGRSSDRVPDPGITPRGPKPAGFAIETDPPVQGQG EEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8978088; 8969509; 9384377 [H]