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The map label for this gene is ntaR [H]

Identifier: 116694268

GI number: 116694268

Start: 349718

End: 350422

Strand: Direct

Name: ntaR [H]

Synonym: H16_B0314

Alternate gene names: 116694268

Gene position: 349718-350422 (Clockwise)

Preceding gene: 116694262

Following gene: 116694271

Centisome position: 12.01

GC content: 61.28

Gene sequence:

>705_bases
ATGCAAGCAACCAACGGCATGAAGCCGCTGATCTCCGCTGTCAGGCGCAAACGGGGATCCGATGTCATCAGTCGATTGCG
CGAGATGGCGATTTCCTACGAGCTCAAGCCGGGCGAACGACTCAATGAGATCGAACTGGCGGAACGCCTCGGCGTGAGCA
GGACGCCAGTGCGTGAAGCGCTGACCCGGCTTGCCACCGAGGGCTTCCTGGTGGAGTCCAGCCGCGGCTATGTGCGCCGG
CCGCTCGATATCCAGGAAATGCTGGACCTATACGAAGCACGCGTAACGATCGAGCGCGATTGCCTGCGCCTGGCGTTCGA
GCGGGCCTCGGCCGAGAGCATCGAGGAGCTTGCGCGATACCTCGAGCACAGCAAGTCGGTGCCCGCAAATACCCCGATCC
CGCAACTGGTGGAACTGGACGAAGGTTTTCACCTGCGCATCGCCGCCATGGCGGGCAACGCCGAACTCAAGCGGATGCTG
GTCAGCCTGAACGAACGCATCCGGTTTATCCGCTGGATCGACATGGAGAATATCGGGCGCGATTCCACCCAGAGCGAACA
CGCTGAAATCGTTCACGCCTTGCAGGCCCACGACTGGGAGAAGGGGGAAAAATGCCTGACTTCGCATATTGCCTTGCGGC
GCGAGCAGATCGTCGAGGCCATTGCGAAAGGCCTCACCAGGATCTACCTGGCCGAACAGCGCTAG

Upstream 100 bases:

>100_bases
ACTGCAGGATACAATTAAGTATACTTAAACTTGAAGGGATGGATGCGTCACCTGAAGGCTCGGCAGCGTCGGGTATGATC
GCGGCCAACGAGGAATATCT

Downstream 100 bases:

>100_bases
CGGCCAGCCAATGCCGCCCCATCGGGCAGCCTAAGCTGTCCGGGCCGGTGCGGTCAGGCTCCCGCCATCGTTTCCGCACT
GACTTCCCATCCTGCGTCAA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MQATNGMKPLISAVRRKRGSDVISRLREMAISYELKPGERLNEIELAERLGVSRTPVREALTRLATEGFLVESSRGYVRR
PLDIQEMLDLYEARVTIERDCLRLAFERASAESIEELARYLEHSKSVPANTPIPQLVELDEGFHLRIAAMAGNAELKRML
VSLNERIRFIRWIDMENIGRDSTQSEHAEIVHALQAHDWEKGEKCLTSHIALRREQIVEAIAKGLTRIYLAEQR

Sequences:

>Translated_234_residues
MQATNGMKPLISAVRRKRGSDVISRLREMAISYELKPGERLNEIELAERLGVSRTPVREALTRLATEGFLVESSRGYVRR
PLDIQEMLDLYEARVTIERDCLRLAFERASAESIEELARYLEHSKSVPANTPIPQLVELDEGFHLRIAAMAGNAELKRML
VSLNERIRFIRWIDMENIGRDSTQSEHAEIVHALQAHDWEKGEKCLTSHIALRREQIVEAIAKGLTRIYLAEQR
>Mature_234_residues
MQATNGMKPLISAVRRKRGSDVISRLREMAISYELKPGERLNEIELAERLGVSRTPVREALTRLATEGFLVESSRGYVRR
PLDIQEMLDLYEARVTIERDCLRLAFERASAESIEELARYLEHSKSVPANTPIPQLVELDEGFHLRIAAMAGNAELKRML
VSLNERIRFIRWIDMENIGRDSTQSEHAEIVHALQAHDWEKGEKCLTSHIALRREQIVEAIAKGLTRIYLAEQR

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26828; Mature: 26828

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQATNGMKPLISAVRRKRGSDVISRLREMAISYELKPGERLNEIELAERLGVSRTPVREA
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHH
LTRLATEGFLVESSRGYVRRPLDIQEMLDLYEARVTIERDCLRLAFERASAESIEELARY
HHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LEHSKSVPANTPIPQLVELDEGFHLRIAAMAGNAELKRMLVSLNERIRFIRWIDMENIGR
HHHCCCCCCCCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEECHHHCCC
DSTQSEHAEIVHALQAHDWEKGEKCLTSHIALRREQIVEAIAKGLTRIYLAEQR
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQATNGMKPLISAVRRKRGSDVISRLREMAISYELKPGERLNEIELAERLGVSRTPVREA
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHH
LTRLATEGFLVESSRGYVRRPLDIQEMLDLYEARVTIERDCLRLAFERASAESIEELARY
HHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LEHSKSVPANTPIPQLVELDEGFHLRIAAMAGNAELKRMLVSLNERIRFIRWIDMENIGR
HHHCCCCCCCCCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEECHHHCCC
DSTQSEHAEIVHALQAHDWEKGEKCLTSHIALRREQIVEAIAKGLTRIYLAEQR
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA