Click here to switch to the map view.

The map label for this gene is 116694162

Identifier: 116694162

GI number: 116694162

Start: 234171

End: 235349

Strand: Direct

Name: 116694162

Synonym: H16_B0207

Alternate gene names: NA

Gene position: 234171-235349 (Clockwise)

Preceding gene: 116694161

Following gene: 116694165

Centisome position: 8.04

GC content: 68.02

Gene sequence:

>1179_bases
ATGCATGACCTTTCCTTCGTTCACGCTGACGCGGCCCACGTCGAATGGCAGGTCGCGCTGGCAGACTGCCAGCGCCAGCT
GGACACGCAGGATTTCCTGCGCCAGGCGAAGGCAGACAACGCGCCGCCGCTCACGCTCGGCTGGTGCTACCTGAGCGACT
ACTACGCGCTGGCCGCCGAGGCCATCCTTGCCGCGCTGCAGCAGAACTGGCCCGGTGTGTCCTGGGTCGGCACGGTCGGC
CTGGGCGTATCCGCCAGCGGCAAAGAGTATTTCGACGAGCCGGCCATGGTGCTGATGGCGGCGCCGTTTCCGCGCGACGC
GTTCCAGCTGTTTTCGGGGCGCCAGCCCTTGCCGCCCGCGTCTTCCGGCTTCGTTCCGCATACCGCGCTGGTGCATGCCG
AGGGCAGTACGCCCGATGTGCAGGACCTGTTGCATGAGCTGAGCGCGCGCACGGCCACCGGTTACCTGTTCGGCGGCTTG
TCGTCGGCCCGCAACCGTACCTTGCATATTGCCGATGGCGTGTTTTCCGGTGGACTGTCGGGCGTGCTGTTCGGCCCCGA
AATCGAACTGGTCTCCCGCGTCACGCAGGGCTGCCAGCCGATCGGGCCGGTGCGCGCCGTCACGCGCAGCAATCACAACC
TCCTGTTCGAGCTGGACGGCAAGCCGGCCCTGGATTGCATCCTGAATGACCTCGGCGTCGAGCGCGATGCCCAGGTGGAA
ACCATGGCGGAGGCGCTGGCCGGAACGCTGGCCGGCCTGAATTCAGCCGCCGACGATGCCCCGGTGCTGCCCGGCAGGTT
CGGCTCGGACACGCTGGTGCGCCACCTGATCGGCCTGGACGTGCAGCATCGCATGCTGGCGCTGGCCGACATGGTCGAGC
CCGGCATGCGGCTGGCTTTCTGCATGCGCAATGCTGACGCGGCGCGCGCGGACCTGGTGCGCGTCGCCACCGAGATCCGT
ACGGAGATCGAACGCGGCGGCAGCCGCGCACGTGGCGCGCTCTACATCAGTTGCTCAGGCCGGGGCGGGCCGCATTTCGG
CGCGCCGCATGCCGAGCTGCAGACCGTACGCCGCGCGCTTGGCGACCTGCCGCTGGCTGGCTTCTTTGCCGGCGGCGAGA
TCGCAAGGGATCACCTCTATGGCTATACGGGGGTGCTGACGGTATTCACCGGCCATTGA

Upstream 100 bases:

>100_bases
GCGGCCGCGGCAGCCGACCGGCTGCCAGAACGGGGGCTGAACACCCCTTGCCGGCAACAGTCCAATGGATGTCGCCAGCC
TGAATACGGAGGAACCCAAA

Downstream 100 bases:

>100_bases
ATCCGCGAATGACAGCATCGATGTTGCGCATCTGGCGCGCAAACCAGATGCGCAACAGGCTGTTCGACAGGACCATCGGC
AGCGAATACGCAATGATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MHDLSFVHADAAHVEWQVALADCQRQLDTQDFLRQAKADNAPPLTLGWCYLSDYYALAAEAILAALQQNWPGVSWVGTVG
LGVSASGKEYFDEPAMVLMAAPFPRDAFQLFSGRQPLPPASSGFVPHTALVHAEGSTPDVQDLLHELSARTATGYLFGGL
SSARNRTLHIADGVFSGGLSGVLFGPEIELVSRVTQGCQPIGPVRAVTRSNHNLLFELDGKPALDCILNDLGVERDAQVE
TMAEALAGTLAGLNSAADDAPVLPGRFGSDTLVRHLIGLDVQHRMLALADMVEPGMRLAFCMRNADAARADLVRVATEIR
TEIERGGSRARGALYISCSGRGGPHFGAPHAELQTVRRALGDLPLAGFFAGGEIARDHLYGYTGVLTVFTGH

Sequences:

>Translated_392_residues
MHDLSFVHADAAHVEWQVALADCQRQLDTQDFLRQAKADNAPPLTLGWCYLSDYYALAAEAILAALQQNWPGVSWVGTVG
LGVSASGKEYFDEPAMVLMAAPFPRDAFQLFSGRQPLPPASSGFVPHTALVHAEGSTPDVQDLLHELSARTATGYLFGGL
SSARNRTLHIADGVFSGGLSGVLFGPEIELVSRVTQGCQPIGPVRAVTRSNHNLLFELDGKPALDCILNDLGVERDAQVE
TMAEALAGTLAGLNSAADDAPVLPGRFGSDTLVRHLIGLDVQHRMLALADMVEPGMRLAFCMRNADAARADLVRVATEIR
TEIERGGSRARGALYISCSGRGGPHFGAPHAELQTVRRALGDLPLAGFFAGGEIARDHLYGYTGVLTVFTGH
>Mature_392_residues
MHDLSFVHADAAHVEWQVALADCQRQLDTQDFLRQAKADNAPPLTLGWCYLSDYYALAAEAILAALQQNWPGVSWVGTVG
LGVSASGKEYFDEPAMVLMAAPFPRDAFQLFSGRQPLPPASSGFVPHTALVHAEGSTPDVQDLLHELSARTATGYLFGGL
SSARNRTLHIADGVFSGGLSGVLFGPEIELVSRVTQGCQPIGPVRAVTRSNHNLLFELDGKPALDCILNDLGVERDAQVE
TMAEALAGTLAGLNSAADDAPVLPGRFGSDTLVRHLIGLDVQHRMLALADMVEPGMRLAFCMRNADAARADLVRVATEIR
TEIERGGSRARGALYISCSGRGGPHFGAPHAELQTVRRALGDLPLAGFFAGGEIARDHLYGYTGVLTVFTGH

Specific function: Unknown

COG id: COG4398

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv0874c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019494
- InterPro:   IPR013702
- InterPro:   IPR016741 [H]

Pfam domain/function: PF08495 FIST; PF10442 FIST_C [H]

EC number: NA

Molecular weight: Translated: 41804; Mature: 41804

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDLSFVHADAAHVEWQVALADCQRQLDTQDFLRQAKADNAPPLTLGWCYLSDYYALAAE
CCCCCEEECCCHHEEEEHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH
AILAALQQNWPGVSWVGTVGLGVSASGKEYFDEPAMVLMAAPFPRDAFQLFSGRQPLPPA
HHHHHHHHCCCCEEEEEHCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCC
SSGFVPHTALVHAEGSTPDVQDLLHELSARTATGYLFGGLSSARNRTLHIADGVFSGGLS
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCHHCCCCC
GVLFGPEIELVSRVTQGCQPIGPVRAVTRSNHNLLFELDGKPALDCILNDLGVERDAQVE
CEEECCHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHH
TMAEALAGTLAGLNSAADDAPVLPGRFGSDTLVRHLIGLDVQHRMLALADMVEPGMRLAF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
CMRNADAARADLVRVATEIRTEIERGGSRARGALYISCSGRGGPHFGAPHAELQTVRRAL
HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
GDLPLAGFFAGGEIARDHLYGYTGVLTVFTGH
CCCCCEEEECCCHHHHHHHCCCEEEEEEEECC
>Mature Secondary Structure
MHDLSFVHADAAHVEWQVALADCQRQLDTQDFLRQAKADNAPPLTLGWCYLSDYYALAAE
CCCCCEEECCCHHEEEEHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH
AILAALQQNWPGVSWVGTVGLGVSASGKEYFDEPAMVLMAAPFPRDAFQLFSGRQPLPPA
HHHHHHHHCCCCEEEEEHCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCC
SSGFVPHTALVHAEGSTPDVQDLLHELSARTATGYLFGGLSSARNRTLHIADGVFSGGLS
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCHHCCCCC
GVLFGPEIELVSRVTQGCQPIGPVRAVTRSNHNLLFELDGKPALDCILNDLGVERDAQVE
CEEECCHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHH
TMAEALAGTLAGLNSAADDAPVLPGRFGSDTLVRHLIGLDVQHRMLALADMVEPGMRLAF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHH
CMRNADAARADLVRVATEIRTEIERGGSRARGALYISCSGRGGPHFGAPHAELQTVRRAL
HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
GDLPLAGFFAGGEIARDHLYGYTGVLTVFTGH
CCCCCEEEECCCHHHHHHHCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]