| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is cpaE2
Identifier: 116694141
GI number: 116694141
Start: 210176
End: 211417
Strand: Direct
Name: cpaE2
Synonym: H16_B0186
Alternate gene names: NA
Gene position: 210176-211417 (Clockwise)
Preceding gene: 116694140
Following gene: 116694142
Centisome position: 7.22
GC content: 71.18
Gene sequence:
>1242_bases ATGGATTATTTTCTGTTGCACGCAACGCAGGACGAAGTGAAGGACTGGCTGGGCAAGGTCCTGGGCGGGCTGGGCACGCT GGTGGCCGAAGGCGGCGCGCAGGAAGCCTTTCTCGAGCGCGTGGCCCAGCTGCGCCCGGGGCTGGTGTTCCTGCACTTCT CGACGGAACTGGCCGGCGCGTCGGCGCGGCTGGGCGAGCAGCTGCTGCGGCTCTTCCCGGGCCTGCCGCTGGTCGCGGTG GGCCATGCCGACGAGCCCGGCATCATGCTGGCGGCGCTGCGCGTGGGCGTGAAGGACTTTATCGACCTGCGCGACGCGCC GGCCGATGCCGAGGCCGTGGTCAAGCGCCTGGCCGTGCCGGGCGAGCAGGTGCGCCAGGCCGAGTCGGCGCGCCAGGGCA AGATCGTGGCGCTGCTGGGCGCGCGCCCCGGCGTGGGCGTGACCAGCCTGGCCGTGAACCTGGCCGCGGCGGCACGCCGC CACCTGCCACTGAATGAAAAGACTGACGCGCGCGCCGAAGTGCTGCTGCTGGACCTGGGCCTGCCGGCGCGCGACGGCGC GCTGTACCTGAACCTGAGTCCGGGCTTCCACTTTGTCGAGGCGGTGCGCAACCTGCGCCGCTTCGACCAGGTCTTCGTGC AGACCGCGCTGACACGCCACGGCAACGGCGTATGCGTGCTGCCGCTGCCCGCGGCGCTGGGCGAGCTGCGCGACATCTCT TACTCCGAAGCCATCAGCCTGCTGGAGCGGCTGCGCGCGTTCTTCGACATGCAGATCATCGACCTGGGCGGCTTCGGCAA TGCCGAGTTCACCGCGCAGATCGTCAAGGCCGCCGACAGCGTGGTGCTGGTGGCCGACCAGAGCGTGGGCGCGATCGTTT CGGCCGCGGAGCTGGTGCATGAGCTGCGCGCGCGCGAGGTGGAGCGCGACGACCTGCACCTGCTGGTGTCGCGCTTCGAT GCGCGCCTGGGCGTGGATGCCGCGCAGATCGCGCACCGCGTGGGTGTGCAGTCGGTGGGCACGCTGCCCGACAGCCGCGC ACCGCTGGTGCTGGCCATGAACCGCGGCGCGGTGCTGGCCGACGACGATCCGCACGACCCCTATGTGCGCGCCCTGGCCG ACCTGCTGGCACGACTGGGCTACCGCGCGGCGCAGGCCAGGGAAACCAGCCTGCTGGCGCGGATGAAGGACAAACTGCCT GAGGCGCTGCGCGCGGTGCGCGTGGCACGCACTGGAACCTGA
Upstream 100 bases:
>100_bases TGGTATGTGCTGGGCGAATACGCGGACCCGACTTTGCCGGGTTTCTCAAAATAGCCGCCGGCCGTGCCGGCAGGCATGGC CAACAGCTTGAGGCGGAGAG
Downstream 100 bases:
>100_bases CATGACGCAAGCGATTGAATTCTCCGACAACGCCCCCGCACCGTTTCCGGTCTCGCAGGAATTCCAGAACATCAAGGAAG CGGCGCACGAGCACCTGCTG
Product: flp pilus assembly ATPase
Products: NA
Alternate protein names: Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Pilus Assembly Protein CpaE; Pilus Assembly Protein; Response Regulator Receiver Domain-Containing Protein; Flp Pilus Assembly Protein ATPase CpaE; Response Receiver Involved In Pilum Assembly; Flp Pilus Assembly Protein ATPase CpaE-Like; Flp Pilus Assembly ATPase; Septum Site-Determining Protein; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein CpaE; Flp Pilus Assembly Protein ATPase; Flp Pilus Assembly ATPase CpaE; Response Regulator Receiver Domain Protein; Fimbriae Assembly Protein; Cobyrinic Acid Ac-Diamide Synthase; Response Regulator; Pilus Assembly Protein CpaE-Like Protein; Chromosome Partitioning ATPase; Pilus Assembly Protein CpaE-Like; Response Regulator Receiver; Type II Secretion System Protein; AAA ATPase
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MDYFLLHATQDEVKDWLGKVLGGLGTLVAEGGAQEAFLERVAQLRPGLVFLHFSTELAGASARLGEQLLRLFPGLPLVAV GHADEPGIMLAALRVGVKDFIDLRDAPADAEAVVKRLAVPGEQVRQAESARQGKIVALLGARPGVGVTSLAVNLAAAARR HLPLNEKTDARAEVLLLDLGLPARDGALYLNLSPGFHFVEAVRNLRRFDQVFVQTALTRHGNGVCVLPLPAALGELRDIS YSEAISLLERLRAFFDMQIIDLGGFGNAEFTAQIVKAADSVVLVADQSVGAIVSAAELVHELRAREVERDDLHLLVSRFD ARLGVDAAQIAHRVGVQSVGTLPDSRAPLVLAMNRGAVLADDDPHDPYVRALADLLARLGYRAAQARETSLLARMKDKLP EALRAVRVARTGT
Sequences:
>Translated_413_residues MDYFLLHATQDEVKDWLGKVLGGLGTLVAEGGAQEAFLERVAQLRPGLVFLHFSTELAGASARLGEQLLRLFPGLPLVAV GHADEPGIMLAALRVGVKDFIDLRDAPADAEAVVKRLAVPGEQVRQAESARQGKIVALLGARPGVGVTSLAVNLAAAARR HLPLNEKTDARAEVLLLDLGLPARDGALYLNLSPGFHFVEAVRNLRRFDQVFVQTALTRHGNGVCVLPLPAALGELRDIS YSEAISLLERLRAFFDMQIIDLGGFGNAEFTAQIVKAADSVVLVADQSVGAIVSAAELVHELRAREVERDDLHLLVSRFD ARLGVDAAQIAHRVGVQSVGTLPDSRAPLVLAMNRGAVLADDDPHDPYVRALADLLARLGYRAAQARETSLLARMKDKLP EALRAVRVARTGT >Mature_413_residues MDYFLLHATQDEVKDWLGKVLGGLGTLVAEGGAQEAFLERVAQLRPGLVFLHFSTELAGASARLGEQLLRLFPGLPLVAV GHADEPGIMLAALRVGVKDFIDLRDAPADAEAVVKRLAVPGEQVRQAESARQGKIVALLGARPGVGVTSLAVNLAAAARR HLPLNEKTDARAEVLLLDLGLPARDGALYLNLSPGFHFVEAVRNLRRFDQVFVQTALTRHGNGVCVLPLPAALGELRDIS YSEAISLLERLRAFFDMQIIDLGGFGNAEFTAQIVKAADSVVLVADQSVGAIVSAAELVHELRAREVERDDLHLLVSRFD ARLGVDAAQIAHRVGVQSVGTLPDSRAPLVLAMNRGAVLADDDPHDPYVRALADLLARLGYRAAQARETSLLARMKDKLP EALRAVRVARTGT
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44330; Mature: 44330
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYFLLHATQDEVKDWLGKVLGGLGTLVAEGGAQEAFLERVAQLRPGLVFLHFSTELAGA CCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCHHCCH SARLGEQLLRLFPGLPLVAVGHADEPGIMLAALRVGVKDFIDLRDAPADAEAVVKRLAVP HHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC GEQVRQAESARQGKIVALLGARPGVGVTSLAVNLAAAARRHLPLNEKTDARAEVLLLDLG HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC LPARDGALYLNLSPGFHFVEAVRNLRRFDQVFVQTALTRHGNGVCVLPLPAALGELRDIS CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCC YSEAISLLERLRAFFDMQIIDLGGFGNAEFTAQIVKAADSVVLVADQSVGAIVSAAELVH HHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH ELRAREVERDDLHLLVSRFDARLGVDAAQIAHRVGVQSVGTLPDSRAPLVLAMNRGAVLA HHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHCCCCCCCCCEEEEECCCEEEC DDDPHDPYVRALADLLARLGYRAAQARETSLLARMKDKLPEALRAVRVARTGT CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDYFLLHATQDEVKDWLGKVLGGLGTLVAEGGAQEAFLERVAQLRPGLVFLHFSTELAGA CCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCHHCCH SARLGEQLLRLFPGLPLVAVGHADEPGIMLAALRVGVKDFIDLRDAPADAEAVVKRLAVP HHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC GEQVRQAESARQGKIVALLGARPGVGVTSLAVNLAAAARRHLPLNEKTDARAEVLLLDLG HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECC LPARDGALYLNLSPGFHFVEAVRNLRRFDQVFVQTALTRHGNGVCVLPLPAALGELRDIS CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCC YSEAISLLERLRAFFDMQIIDLGGFGNAEFTAQIVKAADSVVLVADQSVGAIVSAAELVH HHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH ELRAREVERDDLHLLVSRFDARLGVDAAQIAHRVGVQSVGTLPDSRAPLVLAMNRGAVLA HHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHCCCCCCCCCEEEEECCCEEEC DDDPHDPYVRALADLLARLGYRAAQARETSLLARMKDKLPEALRAVRVARTGT CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA