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The map label for this gene is ycfJ [C]

Identifier: 116694128

GI number: 116694128

Start: 196530

End: 197201

Strand: Direct

Name: ycfJ [C]

Synonym: H16_B0173

Alternate gene names: 116694128

Gene position: 196530-197201 (Clockwise)

Preceding gene: 116694127

Following gene: 116694132

Centisome position: 6.75

GC content: 68.75

Gene sequence:

>672_bases
ATGTCCATCCCCCTTCGTTCGGTTGTGCTTGCGGTGCTTGGCGCCGGTGCGCTGGCCGGGTGTGCCACGCCGTATGGCTA
CGACAACGGGTATGGCGGAGGGTACGGCGGCAGCTATGGTGGCGGCTATAGCAGCAGCGGCTACGGCACCAGCGGCTATG
GCGGCAGCACCACCATCAGCGGCTACCCGGCGCAGCAGGGCTACCCGCAGGGGTACCCGCAACAAGGGTATCCGCAACAG
GGGTATCCGCAGCAAGGCTATCCCCAGCAGCCGTATCCGCAGCAGTCATATCCGGACGGCAGCTACGGCAACAACTACGG
CAACCAGGCTTACGGCGTGCGCTACGGCTGGGTCGAGGCGATCGAGGTGGTGCCCGGCCAGCCGCCTTCGACCAGCGGCG
CGGGCGCCGTGGTCGGCGGCATCGTGGGCGGACTGCTGGGCCACCAGGTCGGCGGCGGCCGCGGCAATACCGTGGCCACC
ATCGGCGGCGCGGTTGCCGGTGCGGTGGCCGGCAACGAGGTCGAGAAGCGCACCGGATCCTCGGCCGCGGCTTACCGTGT
GCGCGTGCGCACCAGCGACAACGCCTACCTGACGCTGACGCAGTCCAACGCCTACCAGATGCGCATCGGCGACCGCGTCA
AGGTCGAGAACGGCGTAGCCGTGCCGTACTAA

Upstream 100 bases:

>100_bases
AGGCAGTTACCAATCACAGGTTCCGGTGACACCCGCTGGCTGCCGGCGGCCCTAGACTCGCGCGCATTCCCCAACACGCG
CAGAGCGCAGGAGTCCTGAC

Downstream 100 bases:

>100_bases
GTGCCGAACAGCTGCGCGTAGTCCTCGCGCAGCTGGCGCTTGAGCAGCTTGCCCGCCGTGTTGCGCGGCAGGTCCGCGAC
GAACACGATGCGCTTGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane Surface Antigen; Surface Antigen

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSIPLRSVVLAVLGAGALAGCATPYGYDNGYGGGYGGSYGGGYSSSGYGTSGYGGSTTISGYPAQQGYPQGYPQQGYPQQ
GYPQQGYPQQPYPQQSYPDGSYGNNYGNQAYGVRYGWVEAIEVVPGQPPSTSGAGAVVGGIVGGLLGHQVGGGRGNTVAT
IGGAVAGAVAGNEVEKRTGSSAAAYRVRVRTSDNAYLTLTQSNAYQMRIGDRVKVENGVAVPY

Sequences:

>Translated_223_residues
MSIPLRSVVLAVLGAGALAGCATPYGYDNGYGGGYGGSYGGGYSSSGYGTSGYGGSTTISGYPAQQGYPQGYPQQGYPQQ
GYPQQGYPQQPYPQQSYPDGSYGNNYGNQAYGVRYGWVEAIEVVPGQPPSTSGAGAVVGGIVGGLLGHQVGGGRGNTVAT
IGGAVAGAVAGNEVEKRTGSSAAAYRVRVRTSDNAYLTLTQSNAYQMRIGDRVKVENGVAVPY
>Mature_222_residues
SIPLRSVVLAVLGAGALAGCATPYGYDNGYGGGYGGSYGGGYSSSGYGTSGYGGSTTISGYPAQQGYPQGYPQQGYPQQG
YPQQGYPQQPYPQQSYPDGSYGNNYGNQAYGVRYGWVEAIEVVPGQPPSTSGAGAVVGGIVGGLLGHQVGGGRGNTVATI
GGAVAGAVAGNEVEKRTGSSAAAYRVRVRTSDNAYLTLTQSNAYQMRIGDRVKVENGVAVPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22671; Mature: 22540

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPLRSVVLAVLGAGALAGCATPYGYDNGYGGGYGGSYGGGYSSSGYGTSGYGGSTTIS
CCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
GYPAQQGYPQGYPQQGYPQQGYPQQGYPQQPYPQQSYPDGSYGNNYGNQAYGVRYGWVEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEE
IEVVPGQPPSTSGAGAVVGGIVGGLLGHQVGGGRGNTVATIGGAVAGAVAGNEVEKRTGS
EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCHHHHHCCC
SAAAYRVRVRTSDNAYLTLTQSNAYQMRIGDRVKVENGVAVPY
CCEEEEEEEEECCCEEEEEECCCEEEEECCCEEEECCCCCCCC
>Mature Secondary Structure 
SIPLRSVVLAVLGAGALAGCATPYGYDNGYGGGYGGSYGGGYSSSGYGTSGYGGSTTIS
CCCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
GYPAQQGYPQGYPQQGYPQQGYPQQGYPQQPYPQQSYPDGSYGNNYGNQAYGVRYGWVEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEE
IEVVPGQPPSTSGAGAVVGGIVGGLLGHQVGGGRGNTVATIGGAVAGAVAGNEVEKRTGS
EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCHHHHHCCC
SAAAYRVRVRTSDNAYLTLTQSNAYQMRIGDRVKVENGVAVPY
CCEEEEEEEEECCCEEEEEECCCEEEEECCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA