| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694078
Identifier: 116694078
GI number: 116694078
Start: 134675
End: 136318
Strand: Direct
Name: 116694078
Synonym: H16_B0118
Alternate gene names: NA
Gene position: 134675-136318 (Clockwise)
Preceding gene: 116694077
Following gene: 116694079
Centisome position: 4.62
GC content: 70.62
Gene sequence:
>1644_bases ATGCGGGCAGGTTTCAGGCAGTCGATGGCATGGCTCCATACCTGGAGCGGCCTGCTGGTGTGCTGGGTGTTGCTGCTGAT GTTCTGCGGCGGCAGCGCCAGCTATTTCAAGGAAGAGATCTCGCTGTGGATGCGGCCCGAGCTGCATCGCACCGCGCCCG CCGCCGAGGTGCCGGCCACGCAGGTGGCGCAGAACGCGGTGCGCTACCTCAGCCGGCAGGCACCCGATGCCGCGCGCTGG TTCATCACGCTGCCCGACGATCGGCGCCAGGCCGCCACCGTGCGGTGGGTCTACAAGCCGGGCCAGGCGCCGCGCGATGC CGACGGCAAGCCGCGCCGGTTCGACAGCCGCTTGCTCGACCCGGCCACCGGCGCGCCGCTGCAGGCCGCGCGCGAGACCC GCGGCGGCGAGTTCCTGTACCGGCTGCATTTCGACCTGCACTACATGCCGGCCAGGTGGGCGCGCTGGATCGCCGGCTTC TGCGCCATGTTCATGCTGGTTGCCATCGTCAGCGGCGTCATCACGCACCGGCGCATCTTTGCCGACTTCTTCACGTTCCG GCGCGGCAAGGGCCAGCGATCCTGGCTCGATGCGCACAATGCGCTGGCGGTGCTGGCGCTGCCATTCCACCTGATGATCA CCTACACGGGGCTGGTCACGCTGCTGTTCATGTATATGCCCTGGGGCATCGAGGCCGCCTATCGCGGCGGCGAGCGCGCT TTCCAGGCCGAGGCGATGCTGCGTCCGCGGCCAGCCAGCGCAGCGGGCACGCCCGCCGCGCTGACAAGCGTGGCAGACAT GGTGGCGCAGGCGGAGCGCCGCTGGCAGGGGGCCGCGCCGCGGCGCATCACCGTGAACCTGCCGGGCGATGCCAATGCCA CCGTGGCGCTGACCCGTGCCGAGCCGACCACGCTGGCACACGATGCGTCCACGCTTGAATTCTCCGGCACCAGCGGCGCC ATGCTGCGCGCGTACGCGGAAGACAAGTCAGCGGCAGAGCTGACGCGCAGCGTCATGACCGGCCTGCATATCGCCGGCTT TGCTTCACCAGGCCTGCGCGCGCTGTTCTTCCTGTGCGGCCTTGCCGGATCCGCTATGGTGGCTACCGGGGCGATCCTGT GGGCGGTACGCACGCGCCAGCAGCAGGCCAAGGCGCTGGCTGCAGGTGCTCGGCCCGGCGTTGGCCTGCGCCTGGTCGAG GCGCTGAACATCGGCGCCATCGCCGGCCTGCCGATTGCCTTTGCCAGCTACTTCTGGGCCAACCGCCTGTTGCCGGTGGA ACTGGCGCAGCGGCCTGAAGCGGAGATCCGCTGGTTCTTCATCGCCTGGGCCGCCTGCGCGCTGCTGGCGCTGCTGCGTC CCGCGCGTGGCATGTGGCGCGCGCAGTTGTGGGTGGGTGCGGCGCTGTTCGGGGGCGTCCCGGTGCTCAACGCCCTGACC ACCGGATCGCACCTGGGCGTGACCTTGCTGCAGGGGCGCGGGCCGGCGGCGGTGGCTGGCTTCGACCTGGTGACGCTGAC GCTCGGTATCGCGCTGGCAGCCGCGGCCTGGATGGTCGGACGCGGGCAGCCGGCACCGCGGCGCACGTCACGCCAGCCGC AGAAGGTGGCCGAAGTGGCTGCCGTCACACAGGAGCCCGCATGA
Upstream 100 bases:
>100_bases TCTGGGTCTTCGCGGTGCGCAGCGCGTGGCGAGCCTGGGCCGGGCTGGCGCTGCCGGCCGCGCTGCTGTTGGCGTTGCTG GCCGTGGGACGGGGCGGCTG
Downstream 100 bases:
>100_bases GCATGAATATGCTGGCTGCCTTCGCACTGTCGCTGTCAGGATTCGCCGCACTGGCGCTGTCGCTTGACCGCCACCATGCC GATATCCATGGCCGCGGCAG
Product: uncharacterized iron-regulated membrane protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family; Iron Uptake Protein; Aspartate Kinase; PepSY-Associated TM Helix Family Protein; PepSY-Associated Membrane Protein; Transmembrane Protein; Peptidase; PepSY Domain Protein; Pepsy-Associated Tm Helix DomaiN-Containing Protein; Iron-Regulated Membrane Protein DUF; Iron Regulated Protein; Pepsy-Associated Tm Helix Domain Protein; Transmembrane PepSY Domain-Containing Protein
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MRAGFRQSMAWLHTWSGLLVCWVLLLMFCGGSASYFKEEISLWMRPELHRTAPAAEVPATQVAQNAVRYLSRQAPDAARW FITLPDDRRQAATVRWVYKPGQAPRDADGKPRRFDSRLLDPATGAPLQAARETRGGEFLYRLHFDLHYMPARWARWIAGF CAMFMLVAIVSGVITHRRIFADFFTFRRGKGQRSWLDAHNALAVLALPFHLMITYTGLVTLLFMYMPWGIEAAYRGGERA FQAEAMLRPRPASAAGTPAALTSVADMVAQAERRWQGAAPRRITVNLPGDANATVALTRAEPTTLAHDASTLEFSGTSGA MLRAYAEDKSAAELTRSVMTGLHIAGFASPGLRALFFLCGLAGSAMVATGAILWAVRTRQQQAKALAAGARPGVGLRLVE ALNIGAIAGLPIAFASYFWANRLLPVELAQRPEAEIRWFFIAWAACALLALLRPARGMWRAQLWVGAALFGGVPVLNALT TGSHLGVTLLQGRGPAAVAGFDLVTLTLGIALAAAAWMVGRGQPAPRRTSRQPQKVAEVAAVTQEPA
Sequences:
>Translated_547_residues MRAGFRQSMAWLHTWSGLLVCWVLLLMFCGGSASYFKEEISLWMRPELHRTAPAAEVPATQVAQNAVRYLSRQAPDAARW FITLPDDRRQAATVRWVYKPGQAPRDADGKPRRFDSRLLDPATGAPLQAARETRGGEFLYRLHFDLHYMPARWARWIAGF CAMFMLVAIVSGVITHRRIFADFFTFRRGKGQRSWLDAHNALAVLALPFHLMITYTGLVTLLFMYMPWGIEAAYRGGERA FQAEAMLRPRPASAAGTPAALTSVADMVAQAERRWQGAAPRRITVNLPGDANATVALTRAEPTTLAHDASTLEFSGTSGA MLRAYAEDKSAAELTRSVMTGLHIAGFASPGLRALFFLCGLAGSAMVATGAILWAVRTRQQQAKALAAGARPGVGLRLVE ALNIGAIAGLPIAFASYFWANRLLPVELAQRPEAEIRWFFIAWAACALLALLRPARGMWRAQLWVGAALFGGVPVLNALT TGSHLGVTLLQGRGPAAVAGFDLVTLTLGIALAAAAWMVGRGQPAPRRTSRQPQKVAEVAAVTQEPA >Mature_547_residues MRAGFRQSMAWLHTWSGLLVCWVLLLMFCGGSASYFKEEISLWMRPELHRTAPAAEVPATQVAQNAVRYLSRQAPDAARW FITLPDDRRQAATVRWVYKPGQAPRDADGKPRRFDSRLLDPATGAPLQAARETRGGEFLYRLHFDLHYMPARWARWIAGF CAMFMLVAIVSGVITHRRIFADFFTFRRGKGQRSWLDAHNALAVLALPFHLMITYTGLVTLLFMYMPWGIEAAYRGGERA FQAEAMLRPRPASAAGTPAALTSVADMVAQAERRWQGAAPRRITVNLPGDANATVALTRAEPTTLAHDASTLEFSGTSGA MLRAYAEDKSAAELTRSVMTGLHIAGFASPGLRALFFLCGLAGSAMVATGAILWAVRTRQQQAKALAAGARPGVGLRLVE ALNIGAIAGLPIAFASYFWANRLLPVELAQRPEAEIRWFFIAWAACALLALLRPARGMWRAQLWVGAALFGGVPVLNALT TGSHLGVTLLQGRGPAAVAGFDLVTLTLGIALAAAAWMVGRGQPAPRRTSRQPQKVAEVAAVTQEPA
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59469; Mature: 59469
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGFRQSMAWLHTWSGLLVCWVLLLMFCGGSASYFKEEISLWMRPELHRTAPAAEVPAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCCCCCCHH QVAQNAVRYLSRQAPDAARWFITLPDDRRQAATVRWVYKPGQAPRDADGKPRRFDSRLLD HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCC PATGAPLQAARETRGGEFLYRLHFDLHYMPARWARWIAGFCAMFMLVAIVSGVITHRRIF CCCCCCHHHHHHCCCCCEEEEEEECEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADFFTFRRGKGQRSWLDAHNALAVLALPFHLMITYTGLVTLLFMYMPWGIEAAYRGGERA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHH FQAEAMLRPRPASAAGTPAALTSVADMVAQAERRWQGAAPRRITVNLPGDANATVALTRA HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEC EPTTLAHDASTLEFSGTSGAMLRAYAEDKSAAELTRSVMTGLHIAGFASPGLRALFFLCG CCCEEECCCCEEEECCCCCHHHEEHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LAGSAMVATGAILWAVRTRQQQAKALAAGARPGVGLRLVEALNIGAIAGLPIAFASYFWA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH NRLLPVELAQRPEAEIRWFFIAWAACALLALLRPARGMWRAQLWVGAALFGGVPVLNALT CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHH TGSHLGVTLLQGRGPAAVAGFDLVTLTLGIALAAAAWMVGRGQPAPRRTSRQPQKVAEVA CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH AVTQEPA HHHCCCC >Mature Secondary Structure MRAGFRQSMAWLHTWSGLLVCWVLLLMFCGGSASYFKEEISLWMRPELHRTAPAAEVPAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCCCCCCHH QVAQNAVRYLSRQAPDAARWFITLPDDRRQAATVRWVYKPGQAPRDADGKPRRFDSRLLD HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCC PATGAPLQAARETRGGEFLYRLHFDLHYMPARWARWIAGFCAMFMLVAIVSGVITHRRIF CCCCCCHHHHHHCCCCCEEEEEEECEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADFFTFRRGKGQRSWLDAHNALAVLALPFHLMITYTGLVTLLFMYMPWGIEAAYRGGERA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHH FQAEAMLRPRPASAAGTPAALTSVADMVAQAERRWQGAAPRRITVNLPGDANATVALTRA HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEC EPTTLAHDASTLEFSGTSGAMLRAYAEDKSAAELTRSVMTGLHIAGFASPGLRALFFLCG CCCEEECCCCEEEECCCCCHHHEEHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LAGSAMVATGAILWAVRTRQQQAKALAAGARPGVGLRLVEALNIGAIAGLPIAFASYFWA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH NRLLPVELAQRPEAEIRWFFIAWAACALLALLRPARGMWRAQLWVGAALFGGVPVLNALT CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHH TGSHLGVTLLQGRGPAAVAGFDLVTLTLGIALAAAAWMVGRGQPAPRRTSRQPQKVAEVA CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH AVTQEPA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA