| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is amn [H]
Identifier: 116694030
GI number: 116694030
Start: 78566
End: 80053
Strand: Direct
Name: amn [H]
Synonym: H16_B0070
Alternate gene names: 116694030
Gene position: 78566-80053 (Clockwise)
Preceding gene: 116694028
Following gene: 116694038
Centisome position: 2.7
GC content: 67.47
Gene sequence:
>1488_bases ATGGCCTCCATGAACGCCCCCGTCTTTTCCTCCGCACATCCGGCCGATCAGCTTGCCGAGTTCACCGACGCGGATGCGGC GATCGCGCGCATCCGCGACATCTACGAAGCTTCTGTCGGCGCCGTGCGCGCGCGCTTCGATGCCTTCGCCAGCGGCAAGC CGCTGCCCTCGGCCGCGCATGCGTGCTATCCGTACCTGGGCATCTCGGTCAATATCGAGACCATGGTCACCGACAGCCGG CCGTCATGGGGCACGGTGGCCTACCCGGGCGTGTATGGCACCACCGTGACCCGCCCCGACCTGCTGGCGGACTACTACCG CGACCAGATCGAGCGGCTGATGCGCTATCACCGCGTGCCTGTGGTGGTAGGGCTGAGCCGGCGCCCGATCCCGCTGCCGT TCGTGATCGAGGCTTCGACCACCGACATCAGCTACACCCAGGCGCGCGAGCTGGAGGCATCGTTCGTGCTGCCCGAGCTG AGCCGCATCGACGACGGCATCGCCAATGGCACCTATGAGCCGATCCCGGGCGAGGCCTGGCCGCTGTCGCTGTTCCCGGC CGAGCGCGTGGACCTGGCCCTGCAGCGGCTGTACCACTACACCGGCACGGCACCGCAGCATTTCCAGCGCTTCGTGCTGT TCACCAACTACCAGCGCTATGTCGACGAGTTTGTCGAGCTGGGCCGGGGCCTGATGGCCAGCAGCGACGGCGGCGGCTAC ACCCGCTTTGTCGAACCCGGCGACGTGATGCAGGAACTGGGCGGCGCGGAACCCGACGACGCCTCGCGCCCGCGCGCGCT GCCGCAGATGCCGGCCTATCACCTGGTGCGCGAAGACAAGCTGGGGGTGACGCTGGTCAATATCGGCGTGGGACCGTCCA ACGCCAAGACCATGACCGACCACCTGGCCGTGCTGCGCCCGCATTGCTGGCTGATGGTGGGCCACTGCGGCGGCTTGCGC CGCTCGCAGCAGCTCGGCGACTACGTGCTGGCGCACGCCTATGTGCGCGACGACCACGTGCTCGACCACGACTTGCCGCC GTGGGTGCCGGTGCCGCCAATCGCCGAGATCCAGGTGGCCTTGCAGGAGGCCGTTGCGCGCGTGACCGGGCTGTCCGGCA ACGAGATGAAGACCCGCATGCGCACCGGCACGGTGGTCTCGACCGACGACCGCAACTGGGAACTCAAGTCCAAGTCGCTG TATGCGCGCTTCAACCAGTCGCGCGCGATTGCCATCGATATGGAAAGCGCGGCGGTGGCGGCCAACGGCTTCCGGCTGCG CGTGCCCTATGGCACCTTGCTATGCGTGTCGGACAAGCCGCTGCATGGCGAGCTCAAGCTGCGCGGCATGGCCAACGCCT TCTATCGCCAGCGTGTCAGCCAGCATATGACCATCGGGCTGGAGGCGATCCGCATCCTGCGTGAGAACGGGGTGGAGCAG CTGCATTCGCGCAAGCTGCGCAGTTTCGACGAGCCGGCGTTCCGCTAG
Upstream 100 bases:
>100_bases TGCCGCGCAATTGGCGGAGTGTAGCGAGCGGGCGCGGGCGCGTCAATTTGGCTTCCGGCGGGGTCGGGTGCTGCTCACGC CGGCGCGCCGGCGCGGTATC
Downstream 100 bases:
>100_bases TCGCCCCGCTCCCGGCAGCCGCAAAAGGCAACTTCCGCTCAGTGGCTGATCATCCAGGGCCGCCCCCCGGGGGCCTTGGC CGCGTCCGTGCGCCCGGCCA
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MASMNAPVFSSAHPADQLAEFTDADAAIARIRDIYEASVGAVRARFDAFASGKPLPSAAHACYPYLGISVNIETMVTDSR PSWGTVAYPGVYGTTVTRPDLLADYYRDQIERLMRYHRVPVVVGLSRRPIPLPFVIEASTTDISYTQARELEASFVLPEL SRIDDGIANGTYEPIPGEAWPLSLFPAERVDLALQRLYHYTGTAPQHFQRFVLFTNYQRYVDEFVELGRGLMASSDGGGY TRFVEPGDVMQELGGAEPDDASRPRALPQMPAYHLVREDKLGVTLVNIGVGPSNAKTMTDHLAVLRPHCWLMVGHCGGLR RSQQLGDYVLAHAYVRDDHVLDHDLPPWVPVPPIAEIQVALQEAVARVTGLSGNEMKTRMRTGTVVSTDDRNWELKSKSL YARFNQSRAIAIDMESAAVAANGFRLRVPYGTLLCVSDKPLHGELKLRGMANAFYRQRVSQHMTIGLEAIRILRENGVEQ LHSRKLRSFDEPAFR
Sequences:
>Translated_495_residues MASMNAPVFSSAHPADQLAEFTDADAAIARIRDIYEASVGAVRARFDAFASGKPLPSAAHACYPYLGISVNIETMVTDSR PSWGTVAYPGVYGTTVTRPDLLADYYRDQIERLMRYHRVPVVVGLSRRPIPLPFVIEASTTDISYTQARELEASFVLPEL SRIDDGIANGTYEPIPGEAWPLSLFPAERVDLALQRLYHYTGTAPQHFQRFVLFTNYQRYVDEFVELGRGLMASSDGGGY TRFVEPGDVMQELGGAEPDDASRPRALPQMPAYHLVREDKLGVTLVNIGVGPSNAKTMTDHLAVLRPHCWLMVGHCGGLR RSQQLGDYVLAHAYVRDDHVLDHDLPPWVPVPPIAEIQVALQEAVARVTGLSGNEMKTRMRTGTVVSTDDRNWELKSKSL YARFNQSRAIAIDMESAAVAANGFRLRVPYGTLLCVSDKPLHGELKLRGMANAFYRQRVSQHMTIGLEAIRILRENGVEQ LHSRKLRSFDEPAFR >Mature_494_residues ASMNAPVFSSAHPADQLAEFTDADAAIARIRDIYEASVGAVRARFDAFASGKPLPSAAHACYPYLGISVNIETMVTDSRP SWGTVAYPGVYGTTVTRPDLLADYYRDQIERLMRYHRVPVVVGLSRRPIPLPFVIEASTTDISYTQARELEASFVLPELS RIDDGIANGTYEPIPGEAWPLSLFPAERVDLALQRLYHYTGTAPQHFQRFVLFTNYQRYVDEFVELGRGLMASSDGGGYT RFVEPGDVMQELGGAEPDDASRPRALPQMPAYHLVREDKLGVTLVNIGVGPSNAKTMTDHLAVLRPHCWLMVGHCGGLRR SQQLGDYVLAHAYVRDDHVLDHDLPPWVPVPPIAEIQVALQEAVARVTGLSGNEMKTRMRTGTVVSTDDRNWELKSKSLY ARFNQSRAIAIDMESAAVAANGFRLRVPYGTLLCVSDKPLHGELKLRGMANAFYRQRVSQHMTIGLEAIRILRENGVEQL HSRKLRSFDEPAFR
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=476, Percent_Identity=49.7899159663866, Blast_Score=434, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 55040; Mature: 54909
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMNAPVFSSAHPADQLAEFTDADAAIARIRDIYEASVGAVRARFDAFASGKPLPSAAH CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ACYPYLGISVNIETMVTDSRPSWGTVAYPGVYGTTVTRPDLLADYYRDQIERLMRYHRVP HHHCEEEEEEEEEEEEECCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC VVVGLSRRPIPLPFVIEASTTDISYTQARELEASFVLPELSRIDDGIANGTYEPIPGEAW EEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCCCCCC PLSLFPAERVDLALQRLYHYTGTAPQHFQRFVLFTNYQRYVDEFVELGRGLMASSDGGGY EEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCE TRFVEPGDVMQELGGAEPDDASRPRALPQMPAYHLVREDKLGVTLVNIGVGPSNAKTMTD EEEECCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHH HLAVLRPHCWLMVGHCGGLRRSQQLGDYVLAHAYVRDDHVLDHDLPPWVPVPPIAEIQVA HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH LQEAVARVTGLSGNEMKTRMRTGTVVSTDDRNWELKSKSLYARFNQSRAIAIDMESAAVA HHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCEECCHHHHHEECCCCEEEEEECCCEEE ANGFRLRVPYGTLLCVSDKPLHGELKLRGMANAFYRQRVSQHMTIGLEAIRILRENGVEQ ECCEEEEECCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LHSRKLRSFDEPAFR HHHHHHHCCCCCCCC >Mature Secondary Structure ASMNAPVFSSAHPADQLAEFTDADAAIARIRDIYEASVGAVRARFDAFASGKPLPSAAH CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ACYPYLGISVNIETMVTDSRPSWGTVAYPGVYGTTVTRPDLLADYYRDQIERLMRYHRVP HHHCEEEEEEEEEEEEECCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC VVVGLSRRPIPLPFVIEASTTDISYTQARELEASFVLPELSRIDDGIANGTYEPIPGEAW EEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCCHHCCCCCCCCCCCCC PLSLFPAERVDLALQRLYHYTGTAPQHFQRFVLFTNYQRYVDEFVELGRGLMASSDGGGY EEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCE TRFVEPGDVMQELGGAEPDDASRPRALPQMPAYHLVREDKLGVTLVNIGVGPSNAKTMTD EEEECCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCHHHHH HLAVLRPHCWLMVGHCGGLRRSQQLGDYVLAHAYVRDDHVLDHDLPPWVPVPPIAEIQVA HHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH LQEAVARVTGLSGNEMKTRMRTGTVVSTDDRNWELKSKSLYARFNQSRAIAIDMESAAVA HHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCEECCHHHHHEECCCCEEEEEECCCEEE ANGFRLRVPYGTLLCVSDKPLHGELKLRGMANAFYRQRVSQHMTIGLEAIRILRENGVEQ ECCEEEEECCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LHSRKLRSFDEPAFR HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]