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The map label for this gene is 116693974

Identifier: 116693974

GI number: 116693974

Start: 14749

End: 15948

Strand: Direct

Name: 116693974

Synonym: H16_B0014

Alternate gene names: NA

Gene position: 14749-15948 (Clockwise)

Preceding gene: 116693973

Following gene: 116693975

Centisome position: 0.51

GC content: 64.75

Gene sequence:

>1200_bases
ATGAGCCCGGTCCTCGCCAGCGTCGAGCAGGCCTTTCCGCGCGCAGAGACTGCTGACGCCGCACACTTGCTGGCCGGAGC
GCGCCTGGCCGCGGCAGAAGCAGCCAGGCATGCAGACCAGGTCGACGCCGATGCGTGTTTTCCGCACCAGGCGTTTGCAG
TCTTGCGTGAGCAGAGGTTGCTGGGCGCCATGGTGCCGCCAGCCTGTGGCGGTGATGGCGCGTCGCTGGAAACGATCGCA
GCGGTCTGCCGCGTGCTGGGCGGTGCCTGTGCCTCGACGGGAATGATCTACGCCATGCACCAGATACAGGTGGCATGCCT
GGTCAATCATGCGAGCACCAGCTCGTGGCACGCGCAGCTATTGCAGCGCCTGGCCAGCGAACAATTGCTGCTGGCTTCGG
CCACGTCCGAAGAGGCGATTGGCGGTGCCCTGCGCAGCAGCGGCTGCGCGGTCAACGCCGATGGCGGCAACCTGTACTTG
CTCAAGATGGCTCCGACCATTTCCTATGGCGCCCATGCCGACGGGATCCTCGTCACGGCACGCCGCCATCCCGATGCCTC
GCCATCGGACCAGGTCATGGTAAGCGTGCTCAAGCCAGACTACGTACTGGAAAGTCTCTCCACCTGGGATACCCTGGGCA
TGCGCGGCACCTGCAGCAATGGATTCCGGCTGGAAGCCCGCGGGCATACCAATCAGATCCTGCCCGTGTCGTTCGGCGAG
ATTGCCGACGTCACCATGACCCCCGTGTCGCACATCTTGTGGTCTGCCTTGTGGACCGGTATCGCCGCGGATGCGGTTCA
GCGCGCCAAGGTGCTGTTCCAGGGCCAGGCGCGCGCCCGGCCTGGCACGCTTCCGCCCTCGGCTACGCGCGTGGCCGAAG
CGGTTGCCATTATCCAGATGCTGGAGGGGCGGCTGGAACTGGCGTTGGCTCACCAACGCCAGCGTCATGCAAGCCAGAGT
GTGTCGGCAATTTTCAACCTGGCGGCGGAAATGAACGGGCTCAAGACCAGCGTGTCGTCGCTGGCGCTCGAAGCGGTGCA
AATCGCGATGCTGGTCTGCGGCATGGCGGGCTACAAGCATGGCACGCCGTTCAGCCTGGGACGCCACCTGCGGGATCTGT
GGTCCGCCCCCTTGATGATCAACAACGATCGCATATTGACCAATACCGCCAATCTGCTACTGGCGGACCGGTCCGCCTGA

Upstream 100 bases:

>100_bases
GCATCGAGATACCTGACCGCATGCTGACTCGCCAGCTGTTCCGCAGCATCAGCACACTGGCTGCGGCGACCGAGCAGATC
AAACAAGAGCAGGAGGCGGC

Downstream 100 bases:

>100_bases
GGAGCCGTCCATGGACGATACCAGCAACGCTTACGTGCCAGGCGACGACGCATCCGTTGCCCCGGGTGACCATTCTGCCA
TGGCCAGGCCGGCGCAGGAT

Product: Acyl-CoA dehydrogenase, short-chain specific

Products: NA

Alternate protein names: Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase Short-Chain Specific; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase Protein; Acyl-CoA Dehydrogenase Domain Protein; Acyl-CoA Dehydrogenase-Like Protein; Carnitine Operon Oxidoreductase

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSPVLASVEQAFPRAETADAAHLLAGARLAAAEAARHADQVDADACFPHQAFAVLREQRLLGAMVPPACGGDGASLETIA
AVCRVLGGACASTGMIYAMHQIQVACLVNHASTSSWHAQLLQRLASEQLLLASATSEEAIGGALRSSGCAVNADGGNLYL
LKMAPTISYGAHADGILVTARRHPDASPSDQVMVSVLKPDYVLESLSTWDTLGMRGTCSNGFRLEARGHTNQILPVSFGE
IADVTMTPVSHILWSALWTGIAADAVQRAKVLFQGQARARPGTLPPSATRVAEAVAIIQMLEGRLELALAHQRQRHASQS
VSAIFNLAAEMNGLKTSVSSLALEAVQIAMLVCGMAGYKHGTPFSLGRHLRDLWSAPLMINNDRILTNTANLLLADRSA

Sequences:

>Translated_399_residues
MSPVLASVEQAFPRAETADAAHLLAGARLAAAEAARHADQVDADACFPHQAFAVLREQRLLGAMVPPACGGDGASLETIA
AVCRVLGGACASTGMIYAMHQIQVACLVNHASTSSWHAQLLQRLASEQLLLASATSEEAIGGALRSSGCAVNADGGNLYL
LKMAPTISYGAHADGILVTARRHPDASPSDQVMVSVLKPDYVLESLSTWDTLGMRGTCSNGFRLEARGHTNQILPVSFGE
IADVTMTPVSHILWSALWTGIAADAVQRAKVLFQGQARARPGTLPPSATRVAEAVAIIQMLEGRLELALAHQRQRHASQS
VSAIFNLAAEMNGLKTSVSSLALEAVQIAMLVCGMAGYKHGTPFSLGRHLRDLWSAPLMINNDRILTNTANLLLADRSA
>Mature_398_residues
SPVLASVEQAFPRAETADAAHLLAGARLAAAEAARHADQVDADACFPHQAFAVLREQRLLGAMVPPACGGDGASLETIAA
VCRVLGGACASTGMIYAMHQIQVACLVNHASTSSWHAQLLQRLASEQLLLASATSEEAIGGALRSSGCAVNADGGNLYLL
KMAPTISYGAHADGILVTARRHPDASPSDQVMVSVLKPDYVLESLSTWDTLGMRGTCSNGFRLEARGHTNQILPVSFGEI
ADVTMTPVSHILWSALWTGIAADAVQRAKVLFQGQARARPGTLPPSATRVAEAVAIIQMLEGRLELALAHQRQRHASQSV
SAIFNLAAEMNGLKTSVSSLALEAVQIAMLVCGMAGYKHGTPFSLGRHLRDLWSAPLMINNDRILTNTANLLLADRSA

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42050; Mature: 41918

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVLASVEQAFPRAETADAAHLLAGARLAAAEAARHADQVDADACFPHQAFAVLREQRL
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LGAMVPPACGGDGASLETIAAVCRVLGGACASTGMIYAMHQIQVACLVNHASTSSWHAQL
HHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHEEEHEEECCCCCHHHHHH
LQRLASEQLLLASATSEEAIGGALRSSGCAVNADGGNLYLLKMAPTISYGAHADGILVTA
HHHHHHCCEEEEECCCHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEE
RRHPDASPSDQVMVSVLKPDYVLESLSTWDTLGMRGTCSNGFRLEARGHTNQILPVSFGE
ECCCCCCCCHHHEEEHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCC
IADVTMTPVSHILWSALWTGIAADAVQRAKVLFQGQARARPGTLPPSATRVAEAVAIIQM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
LEGRLELALAHQRQRHASQSVSAIFNLAAEMNGLKTSVSSLALEAVQIAMLVCGMAGYKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GTPFSLGRHLRDLWSAPLMINNDRILTNTANLLLADRSA
CCCHHHHHHHHHHHCCCEEECCCEEEECCCEEEEECCCC
>Mature Secondary Structure 
SPVLASVEQAFPRAETADAAHLLAGARLAAAEAARHADQVDADACFPHQAFAVLREQRL
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LGAMVPPACGGDGASLETIAAVCRVLGGACASTGMIYAMHQIQVACLVNHASTSSWHAQL
HHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHEEEHEEECCCCCHHHHHH
LQRLASEQLLLASATSEEAIGGALRSSGCAVNADGGNLYLLKMAPTISYGAHADGILVTA
HHHHHHCCEEEEECCCHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEE
RRHPDASPSDQVMVSVLKPDYVLESLSTWDTLGMRGTCSNGFRLEARGHTNQILPVSFGE
ECCCCCCCCHHHEEEHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEEECCCC
IADVTMTPVSHILWSALWTGIAADAVQRAKVLFQGQARARPGTLPPSATRVAEAVAIIQM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
LEGRLELALAHQRQRHASQSVSAIFNLAAEMNGLKTSVSSLALEAVQIAMLVCGMAGYKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GTPFSLGRHLRDLWSAPLMINNDRILTNTANLLLADRSA
CCCHHHHHHHHHHHCCCEEECCCEEEECCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA