| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is epsB [H]
Identifier: 116693972
GI number: 116693972
Start: 11889
End: 14327
Strand: Direct
Name: epsB [H]
Synonym: H16_B0012
Alternate gene names: 116693972
Gene position: 11889-14327 (Clockwise)
Preceding gene: 116693971
Following gene: 116693973
Centisome position: 0.41
GC content: 71.3
Gene sequence:
>2439_bases GTGAGCAGACTGTCATATGCCGGTGGCCCGGCTGAGAGCGCCACCCCGCGCCGTGAGGCCCAGCCGGGCGTCACGCAGGC GCGCGCGCTGATGGACCACCTCGGCTGGATTGCCGCGGCTGGCGTGGCCGGTGCGGCCGCAGGCTTGCTGGTGGCGCTGT CGGCGCCGCCGCAGTATCGCGCGCAGGCGCTGGTGCAGGTTGAGGGGCGCGATGGCGGCATGCGCAGCGTCGCCCAGATG CAGGGCCCGGCGGCCTTCGACGCAGGCCTGCTCAAGAGCCGCGCCGTGGTCGGTCCGGTGGTGGAGCGGCTGCGGCTCGA TATCACCGCGCAGCCGCTGCGTGCGCCGCTGCTGGGCGCGCTGGTCCAGCGCTTTTCCACACCCGGCCAGCCGCGCGGCA CCTGGCCTGCCAGCCTGGGCTATGCCTGGGGCGGCGAGCGTCTGGTAATCGCCAGCATGACCGTGCCCGAGGCGCTGGTA GACCAGCCACTCACCTTCGAGGTGCGCAGCGACGGCCGCTACCGCCTGATGCAGCAGGACACCTTGCTGCTGGAAGGGCG GGCCGGCGAGACTGCGATGGCCAACGGCATTGTGCTGCGCGTGGACAAGATCGAGGCCGGGCCCGGTACGCGCTTCCAGC TCACGCGGCACGACCTGGCCCGCACCGCCGAGTCCGTGCGCCGCGGGCTCACGGTGGAAAGCGAACGCAGTGAAACCCCG GCGAGCCTGGGCGGCGCGGCCGACCCCCTGACCGCGCCGGGCGGCACCGTGCGCGTGAGCTGGCAATACCCGGACCGCCA GCTTGCCGCCCAACTCGTCAACGGGGTCACGCGCGCCTATATCGACGGCCAGACCGACAAGCGCCGCCAGGACGCGGCCG GCACGCTCGCGTTCCTCTCGGGCGAGCTGCCGCGCGTGCAGAGCGAACTCACGCGCGCCGAAGAGGCGCTCACGCGCTAC CGCGCGCGCACGGGTTCGCTGCAGCCCAGCCGCGACGCGCAGTCGTTCCTCAGCAACAGCATGGAGTACCAGCGCCAGAT CGCAGCGCTCAAGCTTGAGCGCACGCGGCTGCTCCAGCGCTTCACGCCCGAGGCCAACGAGGTCCGCACCGTCGACAGCC AGATCCAGCAGATGACTCGCGAGCGCGCGGAGATCGACGCGCGTATGCAGACCCTGTCGGCCTCCGAGCGCGAATCGGTG GCGCTCACGCGTGACGTCAAGGTGGCCGAGGACATGTACATGTCCTTGCGCAGCAAGGTCGAGCAGCTGTCGCTGATGCT GTCCGACAGCTCTACCCAGATGCGCGTGGTCGATGCCGCGATCGCGCCGGTCACACCGGTCGGTCTCGGCGCGTGGCCGT TCGCCTCCGCCGGCGCCTTGCTCGGCCTGTGCCTGGGCGTGGCCGCGATCAACCTGCGCCAGCGCATGCGCCCGTCGGTG GCCAGCGCCGCCGATGCGGAACAGCGCCTGGGCATGGCCATGCTGGGCGATATCGCCTTCAGCAACGAGCAGACCGAGCT GGAACGGCTGGTCGAAGCCAAGCGCCGCCTGGGCATCGCTTCCGGCTTTGTGCTGCCGCCCAATGTGCGCCTCGGCCGGC CGGAGTCTGTCACCAGCGTGATCGACGCCGCCACGGCCGCCGCGCCCGAGGACGAACGCGCGCGCGCCGAACGGCTGCTG CGCCAGGGCCTGCACGACCAGTTCCTGCTGGCGCGGCGCGCCCCGCATTCGCTTGCCGTGGAAGGCCTGCGCACGCTGCG GGCGGCGCTGCATTTCGCGTTGCGCGATGCACCCAACTGCGTGGTTGCGGTGACCAGCCCCGCCGCCAGCGCCGGCAAGA CCTTCGCCGCGGTTAACCTCGCGGTGCTGTTCGCCGAAGCCGGCCAGCGCGTGCTGCTGGTCGACGCCGACCTGCGCCGC GGCCGCGTGGCGGACTGGTTCGACCTGCCTGCCGAGCCCGGGCTGGCAGAAGTGCTCGCTGGCCGCAGCGCGATCGCCGA AGCGGTCAAGCCGAGCGTGGTCAATGGCCTGTTCCTGCTCAGCCGCGGCGCGGTGCCGGCCAATCCGTCCGAGCTGCTGA TGCTGCCCGCGCTGGCGGAATCCCTGCGGCTGTGCGCGGGGCGCTTCGACCTGGTGCTGGTGGACACGCCGCCGGTGATG GCGGTGGCCGATGCCACGCTGGTGGCCAACTTGGCGGGTTCCACGCTGGTGGTGGTGCGCGCCGATGTCACGGCGACGGC GCAGGTCGATGAAACCCTCAAGCGCCTGGCGCACGCCAATGCCAGGCTGGCCGGTGGCATCCTCAACGGTGTCATGCCCC GGCGCAGCAACCGGGCGGACTTCAATACCATCAATCCTTATCTGGGGATGCCGTTGCCACGAGCGGTAGCGAAGCCTCCC GCATTGGCCGGTCAAGCCGATCGGGTAGGGAAAAACTGA
Upstream 100 bases:
>100_bases GCCCGCGCTGGCCAGCGCCTGAGCGGCACGCTTCGGCGCGTGTGGCCTGCGAAGCGCGGCGTGTATACGCCGCGCCGATC CCATTTGAGGAGCTGTAGTC
Downstream 100 bases:
>100_bases CGCATGCCAAAGCACGCCAGAAACCGCACCGCCATTTGTGTGGGTGTACCTGTTTCTGCGAGCGTTTGGCGGACGTTCTG AGCACACGCATTGGTGTGAA
Product: EPS I polysaccharide export protein, putative tyrosine-protein kinase
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: EPS I polysaccharide export protein epsB [H]
Number of amino acids: Translated: 812; Mature: 811
Protein sequence:
>812_residues MSRLSYAGGPAESATPRREAQPGVTQARALMDHLGWIAAAGVAGAAAGLLVALSAPPQYRAQALVQVEGRDGGMRSVAQM QGPAAFDAGLLKSRAVVGPVVERLRLDITAQPLRAPLLGALVQRFSTPGQPRGTWPASLGYAWGGERLVIASMTVPEALV DQPLTFEVRSDGRYRLMQQDTLLLEGRAGETAMANGIVLRVDKIEAGPGTRFQLTRHDLARTAESVRRGLTVESERSETP ASLGGAADPLTAPGGTVRVSWQYPDRQLAAQLVNGVTRAYIDGQTDKRRQDAAGTLAFLSGELPRVQSELTRAEEALTRY RARTGSLQPSRDAQSFLSNSMEYQRQIAALKLERTRLLQRFTPEANEVRTVDSQIQQMTRERAEIDARMQTLSASERESV ALTRDVKVAEDMYMSLRSKVEQLSLMLSDSSTQMRVVDAAIAPVTPVGLGAWPFASAGALLGLCLGVAAINLRQRMRPSV ASAADAEQRLGMAMLGDIAFSNEQTELERLVEAKRRLGIASGFVLPPNVRLGRPESVTSVIDAATAAAPEDERARAERLL RQGLHDQFLLARRAPHSLAVEGLRTLRAALHFALRDAPNCVVAVTSPAASAGKTFAAVNLAVLFAEAGQRVLLVDADLRR GRVADWFDLPAEPGLAEVLAGRSAIAEAVKPSVVNGLFLLSRGAVPANPSELLMLPALAESLRLCAGRFDLVLVDTPPVM AVADATLVANLAGSTLVVVRADVTATAQVDETLKRLAHANARLAGGILNGVMPRRSNRADFNTINPYLGMPLPRAVAKPP ALAGQADRVGKN
Sequences:
>Translated_812_residues MSRLSYAGGPAESATPRREAQPGVTQARALMDHLGWIAAAGVAGAAAGLLVALSAPPQYRAQALVQVEGRDGGMRSVAQM QGPAAFDAGLLKSRAVVGPVVERLRLDITAQPLRAPLLGALVQRFSTPGQPRGTWPASLGYAWGGERLVIASMTVPEALV DQPLTFEVRSDGRYRLMQQDTLLLEGRAGETAMANGIVLRVDKIEAGPGTRFQLTRHDLARTAESVRRGLTVESERSETP ASLGGAADPLTAPGGTVRVSWQYPDRQLAAQLVNGVTRAYIDGQTDKRRQDAAGTLAFLSGELPRVQSELTRAEEALTRY RARTGSLQPSRDAQSFLSNSMEYQRQIAALKLERTRLLQRFTPEANEVRTVDSQIQQMTRERAEIDARMQTLSASERESV ALTRDVKVAEDMYMSLRSKVEQLSLMLSDSSTQMRVVDAAIAPVTPVGLGAWPFASAGALLGLCLGVAAINLRQRMRPSV ASAADAEQRLGMAMLGDIAFSNEQTELERLVEAKRRLGIASGFVLPPNVRLGRPESVTSVIDAATAAAPEDERARAERLL RQGLHDQFLLARRAPHSLAVEGLRTLRAALHFALRDAPNCVVAVTSPAASAGKTFAAVNLAVLFAEAGQRVLLVDADLRR GRVADWFDLPAEPGLAEVLAGRSAIAEAVKPSVVNGLFLLSRGAVPANPSELLMLPALAESLRLCAGRFDLVLVDTPPVM AVADATLVANLAGSTLVVVRADVTATAQVDETLKRLAHANARLAGGILNGVMPRRSNRADFNTINPYLGMPLPRAVAKPP ALAGQADRVGKN >Mature_811_residues SRLSYAGGPAESATPRREAQPGVTQARALMDHLGWIAAAGVAGAAAGLLVALSAPPQYRAQALVQVEGRDGGMRSVAQMQ GPAAFDAGLLKSRAVVGPVVERLRLDITAQPLRAPLLGALVQRFSTPGQPRGTWPASLGYAWGGERLVIASMTVPEALVD QPLTFEVRSDGRYRLMQQDTLLLEGRAGETAMANGIVLRVDKIEAGPGTRFQLTRHDLARTAESVRRGLTVESERSETPA SLGGAADPLTAPGGTVRVSWQYPDRQLAAQLVNGVTRAYIDGQTDKRRQDAAGTLAFLSGELPRVQSELTRAEEALTRYR ARTGSLQPSRDAQSFLSNSMEYQRQIAALKLERTRLLQRFTPEANEVRTVDSQIQQMTRERAEIDARMQTLSASERESVA LTRDVKVAEDMYMSLRSKVEQLSLMLSDSSTQMRVVDAAIAPVTPVGLGAWPFASAGALLGLCLGVAAINLRQRMRPSVA SAADAEQRLGMAMLGDIAFSNEQTELERLVEAKRRLGIASGFVLPPNVRLGRPESVTSVIDAATAAAPEDERARAERLLR QGLHDQFLLARRAPHSLAVEGLRTLRAALHFALRDAPNCVVAVTSPAASAGKTFAAVNLAVLFAEAGQRVLLVDADLRRG RVADWFDLPAEPGLAEVLAGRSAIAEAVKPSVVNGLFLLSRGAVPANPSELLMLPALAESLRLCAGRFDLVLVDTPPVMA VADATLVANLAGSTLVVVRADVTATAQVDETLKRLAHANARLAGGILNGVMPRRSNRADFNTINPYLGMPLPRAVAKPPA LAGQADRVGKN
Specific function: Probably involved in polymerization and/or export of exopolysaccharide EPS I which functions as a virulence factor. May be involved in an ATP-dependent process in the pathway for EPS I production, possibly export of the trimeric repeat units across the in
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=754, Percent_Identity=27.4535809018568, Blast_Score=284, Evalue=1e-77, Organism=Escherichia coli, GI1787216, Length=772, Percent_Identity=27.720207253886, Blast_Score=273, Evalue=3e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 86679; Mature: 86548
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLSYAGGPAESATPRREAQPGVTQARALMDHLGWIAAAGVAGAAAGLLVALSAPPQYR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHC AQALVQVEGRDGGMRSVAQMQGPAAFDAGLLKSRAVVGPVVERLRLDITAQPLRAPLLGA CEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LVQRFSTPGQPRGTWPASLGYAWGGERLVIASMTVPEALVDQPLTFEVRSDGRYRLMQQD HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCEEEECCCCCEEEEECC TLLLEGRAGETAMANGIVLRVDKIEAGPGTRFQLTRHDLARTAESVRRGLTVESERSETP EEEEECCCCCCHHHCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCC ASLGGAADPLTAPGGTVRVSWQYPDRQLAAQLVNGVTRAYIDGQTDKRRQDAAGTLAFLS HHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHC GELPRVQSELTRAEEALTRYRARTGSLQPSRDAQSFLSNSMEYQRQIAALKLERTRLLQR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTPEANEVRTVDSQIQQMTRERAEIDARMQTLSASERESVALTRDVKVAEDMYMSLRSKV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEHHHHHHHHHHHHHHHHH EQLSLMLSDSSTQMRVVDAAIAPVTPVGLGAWPFASAGALLGLCLGVAAINLRQRMRPSV HHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH ASAADAEQRLGMAMLGDIAFSNEQTELERLVEAKRRLGIASGFVLPPNVRLGRPESVTSV HHHCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCEECCCCCCCCCHHHHHH IDAATAAAPEDERARAERLLRQGLHDQFLLARRAPHSLAVEGLRTLRAALHFALRDAPNC HHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCE VVAVTSPAASAGKTFAAVNLAVLFAEAGQRVLLVDADLRRGRVADWFDLPAEPGLAEVLA EEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHCCCCCCCHHHHHH GRSAIAEAVKPSVVNGLFLLSRGAVPANPSELLMLPALAESLRLCAGRFDLVLVDTPPVM CHHHHHHHHCHHHHHHHHHEECCCCCCCHHHHEEHHHHHHHHHHHCCCCCEEEECCCCCH AVADATLVANLAGSTLVVVRADVTATAQVDETLKRLAHANARLAGGILNGVMPRRSNRAD HHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC FNTINPYLGMPLPRAVAKPPALAGQADRVGKN CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLSYAGGPAESATPRREAQPGVTQARALMDHLGWIAAAGVAGAAAGLLVALSAPPQYR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHC AQALVQVEGRDGGMRSVAQMQGPAAFDAGLLKSRAVVGPVVERLRLDITAQPLRAPLLGA CEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LVQRFSTPGQPRGTWPASLGYAWGGERLVIASMTVPEALVDQPLTFEVRSDGRYRLMQQD HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCEEEECCCCCEEEEECC TLLLEGRAGETAMANGIVLRVDKIEAGPGTRFQLTRHDLARTAESVRRGLTVESERSETP EEEEECCCCCCHHHCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCC ASLGGAADPLTAPGGTVRVSWQYPDRQLAAQLVNGVTRAYIDGQTDKRRQDAAGTLAFLS HHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHC GELPRVQSELTRAEEALTRYRARTGSLQPSRDAQSFLSNSMEYQRQIAALKLERTRLLQR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTPEANEVRTVDSQIQQMTRERAEIDARMQTLSASERESVALTRDVKVAEDMYMSLRSKV HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCEEEEHHHHHHHHHHHHHHHHH EQLSLMLSDSSTQMRVVDAAIAPVTPVGLGAWPFASAGALLGLCLGVAAINLRQRMRPSV HHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH ASAADAEQRLGMAMLGDIAFSNEQTELERLVEAKRRLGIASGFVLPPNVRLGRPESVTSV HHHCCHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCEECCCCCCCCCHHHHHH IDAATAAAPEDERARAERLLRQGLHDQFLLARRAPHSLAVEGLRTLRAALHFALRDAPNC HHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCE VVAVTSPAASAGKTFAAVNLAVLFAEAGQRVLLVDADLRRGRVADWFDLPAEPGLAEVLA EEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHCCCCCCCHHHHHH GRSAIAEAVKPSVVNGLFLLSRGAVPANPSELLMLPALAESLRLCAGRFDLVLVDTPPVM CHHHHHHHHCHHHHHHHHHEECCCCCCCHHHHEEHHHHHHHHHHHCCCCCEEEECCCCCH AVADATLVANLAGSTLVVVRADVTATAQVDETLKRLAHANARLAGGILNGVMPRRSNRAD HHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCC FNTINPYLGMPLPRAVAKPPALAGQADRVGKN CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]