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The map label for this gene is yhjB [C]

Identifier: 116693966

GI number: 116693966

Start: 7033

End: 7893

Strand: Direct

Name: yhjB [C]

Synonym: H16_B0006

Alternate gene names: 116693966

Gene position: 7033-7893 (Clockwise)

Preceding gene: 116693964

Following gene: 116693967

Centisome position: 0.24

GC content: 68.18

Gene sequence:

>861_bases
ATGGCCACCATCCTCTTGATCGAGCCTCACCCCCTCCTGCGCCTGGGTCTGCGCCATCTGCTGGCCCAAGCACATATTCC
TGGTGACCTGATCGATATCGATCCCCTCGCCCCAGTCGATTCAGATTTGTGGCTGTACGATGCCGACCTGCTGATCTATG
GCCTGCCAGCCGATCACGCCGGCGGCTGGGCCATGCTGGAGGAACTGTGCCAGCGGCTACGCCCGCAGCGCGTGCTGGTC
CTCAGCGATCAGGCGGCCCCATCGCTGCCGGATGCAGGCTTGCCTGACCCGGTGCGCGGCTGCGTGGCCAAGAGCTGCAG
TGCGGATGCGCTCGATGCCGCGGTGCGCCTGGTGCTGGCCGGCGGCGAGTGCTTCCCGGCGCGTGCCCAAGGCAGCCACC
ATGCCTGGCAATCGGAACTCGATGCCGGCCATACCCCGGTGGCAAGCAGCGCAGGGCAGGGCGAGGCCCGGGTCGTGGCG
CTGCGCGCAGGCATCGGCGAGGCCGTGCTCGAGCATGCGGTGCCCGCGCCCCAGCGCCATTTCCAGGCGCACGCGACGTA
CCACGAAACCCCGTCGGCCGGCGCGCACCTGCTGAACATCACCGAACGCCAGTACGAAGTGCTGGCGCTGCTGGCTCGGG
GCTATCCCATCAAGACGGTCAGCCGCATGCTGAATATCTCGGTGGCCACCGCGAAGACGCATGCCTGCACGCTGTACCAG
CGCCTGCACGTACGCAACAAGGGCGAAGCCGTCTACGTTGCCCTGCAGAAGGGTGCCACGCTCAACTGGGCCGGGCCCGC
CACGCCCGTCAATCCGGTGACCCGGGTGCCGGCACCTGATCCCACCTGCCAGGCTGCGTGA

Upstream 100 bases:

>100_bases
GATCGTATGGAAGTGCAACCGCAAGATAGCGGAGCATTTCCGACAAGCAAGCGCGGATTGTCGCAGGGTCCGAACTTGCC
GCAATAATAAGAGAGCGGCC

Downstream 100 bases:

>100_bases
CGGGTGGCGGCGCGGCGTTCACGGGTCGCGCCTCATCCTTCTGGCGTGCGGCTCTCGGCCAAAAGCATGAGGCAATGGCA
GCGGCGGCTTGCTACCTTGT

Product: response regulator

Products: NA

Alternate protein names: Two Component Transcriptional Regulator LuxR Family; LuxR Family Regulatory Protein; Regulatory Protein LuxR; Response Regulator; Transcription Regulator Protein; Transcriptional Regulator Luxr Family; Transcriptional Regulator LuxR Family; Negative Regulator Of Exopolysaccharide Production Protein; Transcription Regulator LuxR Family

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MATILLIEPHPLLRLGLRHLLAQAHIPGDLIDIDPLAPVDSDLWLYDADLLIYGLPADHAGGWAMLEELCQRLRPQRVLV
LSDQAAPSLPDAGLPDPVRGCVAKSCSADALDAAVRLVLAGGECFPARAQGSHHAWQSELDAGHTPVASSAGQGEARVVA
LRAGIGEAVLEHAVPAPQRHFQAHATYHETPSAGAHLLNITERQYEVLALLARGYPIKTVSRMLNISVATAKTHACTLYQ
RLHVRNKGEAVYVALQKGATLNWAGPATPVNPVTRVPAPDPTCQAA

Sequences:

>Translated_286_residues
MATILLIEPHPLLRLGLRHLLAQAHIPGDLIDIDPLAPVDSDLWLYDADLLIYGLPADHAGGWAMLEELCQRLRPQRVLV
LSDQAAPSLPDAGLPDPVRGCVAKSCSADALDAAVRLVLAGGECFPARAQGSHHAWQSELDAGHTPVASSAGQGEARVVA
LRAGIGEAVLEHAVPAPQRHFQAHATYHETPSAGAHLLNITERQYEVLALLARGYPIKTVSRMLNISVATAKTHACTLYQ
RLHVRNKGEAVYVALQKGATLNWAGPATPVNPVTRVPAPDPTCQAA
>Mature_285_residues
ATILLIEPHPLLRLGLRHLLAQAHIPGDLIDIDPLAPVDSDLWLYDADLLIYGLPADHAGGWAMLEELCQRLRPQRVLVL
SDQAAPSLPDAGLPDPVRGCVAKSCSADALDAAVRLVLAGGECFPARAQGSHHAWQSELDAGHTPVASSAGQGEARVVAL
RAGIGEAVLEHAVPAPQRHFQAHATYHETPSAGAHLLNITERQYEVLALLARGYPIKTVSRMLNISVATAKTHACTLYQR
LHVRNKGEAVYVALQKGATLNWAGPATPVNPVTRVPAPDPTCQAA

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30457; Mature: 30326

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATILLIEPHPLLRLGLRHLLAQAHIPGDLIDIDPLAPVDSDLWLYDADLLIYGLPADHA
CEEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCEEEEECCCCCC
GGWAMLEELCQRLRPQRVLVLSDQAAPSLPDAGLPDPVRGCVAKSCSADALDAAVRLVLA
CCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHEEE
GGECFPARAQGSHHAWQSELDAGHTPVASSAGQGEARVVALRAGIGEAVLEHAVPAPQRH
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHH
FQAHATYHETPSAGAHLLNITERQYEVLALLARGYPIKTVSRMLNISVATAKTHACTLYQ
HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCHHHHHHHH
RLHVRNKGEAVYVALQKGATLNWAGPATPVNPVTRVPAPDPTCQAA
HHHHCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATILLIEPHPLLRLGLRHLLAQAHIPGDLIDIDPLAPVDSDLWLYDADLLIYGLPADHA
EEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCEEEEECCCCCC
GGWAMLEELCQRLRPQRVLVLSDQAAPSLPDAGLPDPVRGCVAKSCSADALDAAVRLVLA
CCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHEEE
GGECFPARAQGSHHAWQSELDAGHTPVASSAGQGEARVVALRAGIGEAVLEHAVPAPQRH
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHH
FQAHATYHETPSAGAHLLNITERQYEVLALLARGYPIKTVSRMLNISVATAKTHACTLYQ
HHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCHHHHHHHH
RLHVRNKGEAVYVALQKGATLNWAGPATPVNPVTRVPAPDPTCQAA
HHHHCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA