Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478388

Identifier: 113478388

GI number: 113478388

Start: 7741452

End: 7743251

Strand: Reverse

Name: 113478388

Synonym: Tery_5073

Alternate gene names: NA

Gene position: 7743251-7741452 (Counterclockwise)

Preceding gene: 113478389

Following gene: 113478387

Centisome position: 99.91

GC content: 30.72

Gene sequence:

>1800_bases
GTGGGTCTAGTTACTCATAAAATTGATGTTGATGGAAAAGGAAAAGGAAAGTCTGGTGTAGCGATATCAATAGAAGCTTT
AGAAAAAATTTGGCCTGAAATACCTGCTAGTATTTCTCGGAAAATTACACGAGAATCACTAAAGAATCCTATTGATTCAA
CTCATGGAAATAAAATACCAAAGTGGTGGCTTACACATTTTTTGCCTTACTGTCTTTTTTTCGTTTTTCTATTAGTAATA
TATCAGAAAATATTAGACATATTTAAGAAAATTGATACAAATCAACCTCAAAATATTTCTCAAAATAATTCTGAAAATAA
TCCTAAAAGTAAAAGTATTTATGATCTTTGTCCTACAGAATTTCAGTTCTTAACTTGTGGTGAAAAAGAGCAAGGTATTA
CTATTAATTTTCCTGTAAACAGCGCATTTTCAACAGAAGAAAGGCGTGGGAGAGATGAATTAGCTAAAAGGAATTATAAA
CAAGCTGTTGAATATTTAAAAGAAGCATGGGAAGGAGAGGATGGAGATAAAGATCCTTCTCTTTTAATTGCTTTGAATAA
TGCCAAAGTTATGCTAGATATTCAACAAGGAGACTTACCTAGAAACCAGGTCTATGCAATCAGTGTTGCTATTCCTTTTA
GTCACACCCTAAGATATGTAAGTAAGAATATACTTAGAGGGATAGCTTGGAAACAAGAGGAGTTTAATAATAAATCTGAT
GATAATAATGAAGATTGGAAATTATTAGTGTTAATGGCTGATGATTCTAACGACGGAGAACAAGCTAAAAAAATAGCTGA
CGAAATAGGAACCTATAATTCTACTTTAGATAATCCTATTTTAGGATTTATAGGTCATTATTCTTCCAGAGCTACAATCA
ATGTAATTAATAAATATCATAAACTTAAAATAAATCAAATTACACCAAGTGCTACCTCTACTAGAGCAGACCTAAAAGAT
ACTTATAAAAAGGTATTTAAAAGTGAAAATTTGTCGAATTCTCAACTAAATTTTTCATTTTTCTTTAGAACTATTGGAAC
AACAAAAGAAGCGATGGATGCAGTTAGAAAGTACATTGATAATGAGAATCTAGAAATAAAAAATGTAATTATTTTTAGGA
ATAGTACCGATGTTTTTTCTCTTTCTTCATCTTCTGAAGCAAAAAAACAACTCCTAGAAAGGATACAGAAAGACAATATT
ACAGAGGTTGAATTATTTCAAAAAAATCCATTAGATTTGAGAGAAACACTTAAAAGATACAAAAATAATCCTTTACGTAA
TGAGACAAATACAGTTATTTTTTTATTTATGGGTGCATACACTGAATCCCAAAGAGGTCAAGTTAAAGCAATTATTGAAG
AAAATAAAGGAGATTTTTTACTGATTGGTAATAGTCCTGTGTATACTCCAGATTTTTTGACAAAATTCGACAAGTCAGTA
CTGAATAACATAATAATTAGAAGATTTTGGGAACCCTCTGAGTCAGATCAAAAATTTAAAAATTTTCAGAGTTTTTGGAA
GACAGAGGATTATTTAATCACGCGCATTGGCACATCTTATGATGCGACTGAAATGTTCATTCGAGCAATTTCTCAACAAC
ATCAAAGCGTAGGAACTCCTACACCAGAAGGAATCAATAATGCTTTGTTAAATACTGATTTTATAGGGATGACAGGAAAA
GTTAAAATTATTAAAGATGGGCCAAATAAAGGCGATCGCCAAGGTGCTAATTTTTATTTAATTAAACCATATTGCGAGGA
AAATGGTGAATGTAGATGGATGAGGTTAAACCCATATTAG

Upstream 100 bases:

>100_bases
ACAGAAAAAGTTGCAGTTGGAAAGTTAGAGATAAAAAAAAGGAATTCTTCGTTCAGGTTATAGTGGTGCCCCCGTTTATG
ATATTAATAAAAAATCAGTT

Downstream 100 bases:

>100_bases
GAAGAAAATTAGGGCTAAAAGAGGACGTCATGACAGCTCCTGGAACAAGGATGTGAAAACCCCTATCTATAAAGAATATT
AAGTCTATAAATTAGCTCTT

Product: branched-chain amino acid ABC transporter periplasmic component-like protein

Products: NA

Alternate protein names: Serine/Threonine Kinase

Number of amino acids: Translated: 599; Mature: 598

Protein sequence:

>599_residues
MGLVTHKIDVDGKGKGKSGVAISIEALEKIWPEIPASISRKITRESLKNPIDSTHGNKIPKWWLTHFLPYCLFFVFLLVI
YQKILDIFKKIDTNQPQNISQNNSENNPKSKSIYDLCPTEFQFLTCGEKEQGITINFPVNSAFSTEERRGRDELAKRNYK
QAVEYLKEAWEGEDGDKDPSLLIALNNAKVMLDIQQGDLPRNQVYAISVAIPFSHTLRYVSKNILRGIAWKQEEFNNKSD
DNNEDWKLLVLMADDSNDGEQAKKIADEIGTYNSTLDNPILGFIGHYSSRATINVINKYHKLKINQITPSATSTRADLKD
TYKKVFKSENLSNSQLNFSFFFRTIGTTKEAMDAVRKYIDNENLEIKNVIIFRNSTDVFSLSSSSEAKKQLLERIQKDNI
TEVELFQKNPLDLRETLKRYKNNPLRNETNTVIFLFMGAYTESQRGQVKAIIEENKGDFLLIGNSPVYTPDFLTKFDKSV
LNNIIIRRFWEPSESDQKFKNFQSFWKTEDYLITRIGTSYDATEMFIRAISQQHQSVGTPTPEGINNALLNTDFIGMTGK
VKIIKDGPNKGDRQGANFYLIKPYCEENGECRWMRLNPY

Sequences:

>Translated_599_residues
MGLVTHKIDVDGKGKGKSGVAISIEALEKIWPEIPASISRKITRESLKNPIDSTHGNKIPKWWLTHFLPYCLFFVFLLVI
YQKILDIFKKIDTNQPQNISQNNSENNPKSKSIYDLCPTEFQFLTCGEKEQGITINFPVNSAFSTEERRGRDELAKRNYK
QAVEYLKEAWEGEDGDKDPSLLIALNNAKVMLDIQQGDLPRNQVYAISVAIPFSHTLRYVSKNILRGIAWKQEEFNNKSD
DNNEDWKLLVLMADDSNDGEQAKKIADEIGTYNSTLDNPILGFIGHYSSRATINVINKYHKLKINQITPSATSTRADLKD
TYKKVFKSENLSNSQLNFSFFFRTIGTTKEAMDAVRKYIDNENLEIKNVIIFRNSTDVFSLSSSSEAKKQLLERIQKDNI
TEVELFQKNPLDLRETLKRYKNNPLRNETNTVIFLFMGAYTESQRGQVKAIIEENKGDFLLIGNSPVYTPDFLTKFDKSV
LNNIIIRRFWEPSESDQKFKNFQSFWKTEDYLITRIGTSYDATEMFIRAISQQHQSVGTPTPEGINNALLNTDFIGMTGK
VKIIKDGPNKGDRQGANFYLIKPYCEENGECRWMRLNPY
>Mature_598_residues
GLVTHKIDVDGKGKGKSGVAISIEALEKIWPEIPASISRKITRESLKNPIDSTHGNKIPKWWLTHFLPYCLFFVFLLVIY
QKILDIFKKIDTNQPQNISQNNSENNPKSKSIYDLCPTEFQFLTCGEKEQGITINFPVNSAFSTEERRGRDELAKRNYKQ
AVEYLKEAWEGEDGDKDPSLLIALNNAKVMLDIQQGDLPRNQVYAISVAIPFSHTLRYVSKNILRGIAWKQEEFNNKSDD
NNEDWKLLVLMADDSNDGEQAKKIADEIGTYNSTLDNPILGFIGHYSSRATINVINKYHKLKINQITPSATSTRADLKDT
YKKVFKSENLSNSQLNFSFFFRTIGTTKEAMDAVRKYIDNENLEIKNVIIFRNSTDVFSLSSSSEAKKQLLERIQKDNIT
EVELFQKNPLDLRETLKRYKNNPLRNETNTVIFLFMGAYTESQRGQVKAIIEENKGDFLLIGNSPVYTPDFLTKFDKSVL
NNIIIRRFWEPSESDQKFKNFQSFWKTEDYLITRIGTSYDATEMFIRAISQQHQSVGTPTPEGINNALLNTDFIGMTGKV
KIIKDGPNKGDRQGANFYLIKPYCEENGECRWMRLNPY

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68758; Mature: 68626

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLVTHKIDVDGKGKGKSGVAISIEALEKIWPEIPASISRKITRESLKNPIDSTHGNKIP
CCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCH
KWWLTHFLPYCLFFVFLLVIYQKILDIFKKIDTNQPQNISQNNSENNPKSKSIYDLCPTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
FQFLTCGEKEQGITINFPVNSAFSTEERRGRDELAKRNYKQAVEYLKEAWEGEDGDKDPS
EEEEECCCCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
LLIALNNAKVMLDIQQGDLPRNQVYAISVAIPFSHTLRYVSKNILRGIAWKQEEFNNKSD
EEEEEECCEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DNNEDWKLLVLMADDSNDGEQAKKIADEIGTYNSTLDNPILGFIGHYSSRATINVINKYH
CCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH
KLKINQITPSATSTRADLKDTYKKVFKSENLSNSQLNFSFFFRTIGTTKEAMDAVRKYID
EEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEHEEEEEHHCCCHHHHHHHHHHHC
NENLEIKNVIIFRNSTDVFSLSSSSEAKKQLLERIQKDNITEVELFQKNPLDLRETLKRY
CCCCEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
KNNPLRNETNTVIFLFMGAYTESQRGQVKAIIEENKGDFLLIGNSPVYTPDFLTKFDKSV
CCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHH
LNNIIIRRFWEPSESDQKFKNFQSFWKTEDYLITRIGTSYDATEMFIRAISQQHQSVGTP
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
TPEGINNALLNTDFIGMTGKVKIIKDGPNKGDRQGANFYLIKPYCEENGECRWMRLNPY
CCCCCCHHHCCCCEECCCCEEEEEECCCCCCCCCCCCEEEEEHHCCCCCCEEEEEECCC
>Mature Secondary Structure 
GLVTHKIDVDGKGKGKSGVAISIEALEKIWPEIPASISRKITRESLKNPIDSTHGNKIP
CCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCH
KWWLTHFLPYCLFFVFLLVIYQKILDIFKKIDTNQPQNISQNNSENNPKSKSIYDLCPTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
FQFLTCGEKEQGITINFPVNSAFSTEERRGRDELAKRNYKQAVEYLKEAWEGEDGDKDPS
EEEEECCCCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
LLIALNNAKVMLDIQQGDLPRNQVYAISVAIPFSHTLRYVSKNILRGIAWKQEEFNNKSD
EEEEEECCEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DNNEDWKLLVLMADDSNDGEQAKKIADEIGTYNSTLDNPILGFIGHYSSRATINVINKYH
CCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH
KLKINQITPSATSTRADLKDTYKKVFKSENLSNSQLNFSFFFRTIGTTKEAMDAVRKYID
EEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEHEEEEEHHCCCHHHHHHHHHHHC
NENLEIKNVIIFRNSTDVFSLSSSSEAKKQLLERIQKDNITEVELFQKNPLDLRETLKRY
CCCCEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
KNNPLRNETNTVIFLFMGAYTESQRGQVKAIIEENKGDFLLIGNSPVYTPDFLTKFDKSV
CCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHH
LNNIIIRRFWEPSESDQKFKNFQSFWKTEDYLITRIGTSYDATEMFIRAISQQHQSVGTP
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
TPEGINNALLNTDFIGMTGKVKIIKDGPNKGDRQGANFYLIKPYCEENGECRWMRLNPY
CCCCCCHHHCCCCEECCCCEEEEEECCCCCCCCCCCCEEEEEHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA