| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113478375
Identifier: 113478375
GI number: 113478375
Start: 7716299
End: 7716715
Strand: Reverse
Name: 113478375
Synonym: Tery_5057
Alternate gene names: NA
Gene position: 7716715-7716299 (Counterclockwise)
Preceding gene: 113478380
Following gene: 113478374
Centisome position: 99.57
GC content: 39.57
Gene sequence:
>417_bases TTGGTAAAAACCATTGTCCTACAATTGGAACGCATAAATGGAATTATCAGACAGCATAGCGGTCGATGGCATCGCCGACA GAATAAATTTGGCAAGCTCTGGCAACAAACTGAGGTAACAGTAAGGTTGGCGAGGGCCTACTTTAATTTGATTTGGGTTC ATAGTTGCAAAGAAAATACTGCTGCACAAAGAGCTGAGGAACGCGATCGCTCCTTGAAGTTGGAACGACTTAATTACTTA TCCCACACTTTACTGACGCACTACCAAACCCTTGAATCTATTTTTAGTTTACTCCTTTGTGGGCAAGGAAATTCAGTTCC CTATCATTGTCAAACCAAATCTGAAAGTGCTATCAGTCATTTCTTAAATAATTTTAAATGGTCAACTCGTTCTTTAATTC GTACTGTCCAAATCTGA
Upstream 100 bases:
>100_bases AATTGATCCTCAATACAGAAGAGAAAACTAGCTGTAAAAAATGGCTAACTGATAATTGGGGAGGGTATGAACGAGTATTG CTCTGTAATAGAACACATTA
Downstream 100 bases:
>100_bases AAGTGCTATCAGTCATTTCTTAAATAATTTTAAATGGTCAACTCGTTCTTTAATTCGTACTGTTCATTCTTTTCTACTCC ATCTCATTTTTTCTGAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MVKTIVLQLERINGIIRQHSGRWHRRQNKFGKLWQQTEVTVRLARAYFNLIWVHSCKENTAAQRAEERDRSLKLERLNYL SHTLLTHYQTLESIFSLLLCGQGNSVPYHCQTKSESAISHFLNNFKWSTRSLIRTVQI
Sequences:
>Translated_138_residues MVKTIVLQLERINGIIRQHSGRWHRRQNKFGKLWQQTEVTVRLARAYFNLIWVHSCKENTAAQRAEERDRSLKLERLNYL SHTLLTHYQTLESIFSLLLCGQGNSVPYHCQTKSESAISHFLNNFKWSTRSLIRTVQI >Mature_138_residues MVKTIVLQLERINGIIRQHSGRWHRRQNKFGKLWQQTEVTVRLARAYFNLIWVHSCKENTAAQRAEERDRSLKLERLNYL SHTLLTHYQTLESIFSLLLCGQGNSVPYHCQTKSESAISHFLNNFKWSTRSLIRTVQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16323; Mature: 16323
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKTIVLQLERINGIIRQHSGRWHRRQNKFGKLWQQTEVTVRLARAYFNLIWVHSCKENT CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AAQRAEERDRSLKLERLNYLSHTLLTHYQTLESIFSLLLCGQGNSVPYHCQTKSESAISH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHH FLNNFKWSTRSLIRTVQI HHHCCCCHHHHHHHHHCC >Mature Secondary Structure MVKTIVLQLERINGIIRQHSGRWHRRQNKFGKLWQQTEVTVRLARAYFNLIWVHSCKENT CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AAQRAEERDRSLKLERLNYLSHTLLTHYQTLESIFSLLLCGQGNSVPYHCQTKSESAISH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHH FLNNFKWSTRSLIRTVQI HHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA