| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is terX [H]
Identifier: 113478372
GI number: 113478372
Start: 7713511
End: 7714113
Strand: Reverse
Name: terX [H]
Synonym: Tery_5053
Alternate gene names: 113478372
Gene position: 7714113-7713511 (Counterclockwise)
Preceding gene: 113478374
Following gene: 113478371
Centisome position: 99.54
GC content: 30.18
Gene sequence:
>603_bases ATGAGTATAAATCTTAAAAAAGGGCAAAAAATTTTACTTGATAAAAGTGAATATGATCTATCAAGACTGACAATGGGACT AGGATGGGATGTAGCAAAGTATACAGGTGGTTTAGCTGGTTTATTCGTTAATAGATCGGATTTTGATCTGGATGGTTATG CCATTTTATTAGAAGAGAATGATAAACTTAAAAACTACAAAGAAGATGTAATTTATTATGGTCATTTAGAATCTAAAGAT AAGACAATAATTCATTCAGGAGATAATCTGACTGGAGAAGGAGAGGGAGATGATGAACAAATAATTTTGAAATTAAACTC TATTCCTGAAAAATACCAAAAAATTATCTTAGCAGTAAGTATTTATCAAGCTAAAGAAAGGAAACAACAATTTGGAATGG TAGAAAATGCTTTTGTTAGAGCTGTTGATTATAAAGGGGTAGAAATAGCAAGGTATACTTTATCTGGTAATGGCACTTAT CAAGGTAAAATATCAATGTTAATGGGAGCAGTTTATAGAGACGATAAATATTGGAAATTTAACGCTTTAGGTAATCCTTT GGATAGTGATATGAATGGTGTAGTAGGTTCATTTATGAAATAA
Upstream 100 bases:
>100_bases AAAGATTGATTCACTTTTGTACAAAAAATTGATCAAACTGCTATAATTTATTATTAAATTTCATGAAAATTTTTTAGAGT TTATATAGGGTAATAAATAT
Downstream 100 bases:
>100_bases ATTTAGCTAGTTTTGGCAAATAATTAATAAAAAGCTTGAAATTGGAAACTAATCATTGAATTAATGAATCGTGAAAGTAT ATAGAGAAAAACATTATGAA
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSINLKKGQKILLDKSEYDLSRLTMGLGWDVAKYTGGLAGLFVNRSDFDLDGYAILLEENDKLKNYKEDVIYYGHLESKD KTIIHSGDNLTGEGEGDDEQIILKLNSIPEKYQKIILAVSIYQAKERKQQFGMVENAFVRAVDYKGVEIARYTLSGNGTY QGKISMLMGAVYRDDKYWKFNALGNPLDSDMNGVVGSFMK
Sequences:
>Translated_200_residues MSINLKKGQKILLDKSEYDLSRLTMGLGWDVAKYTGGLAGLFVNRSDFDLDGYAILLEENDKLKNYKEDVIYYGHLESKD KTIIHSGDNLTGEGEGDDEQIILKLNSIPEKYQKIILAVSIYQAKERKQQFGMVENAFVRAVDYKGVEIARYTLSGNGTY QGKISMLMGAVYRDDKYWKFNALGNPLDSDMNGVVGSFMK >Mature_199_residues SINLKKGQKILLDKSEYDLSRLTMGLGWDVAKYTGGLAGLFVNRSDFDLDGYAILLEENDKLKNYKEDVIYYGHLESKDK TIIHSGDNLTGEGEGDDEQIILKLNSIPEKYQKIILAVSIYQAKERKQQFGMVENAFVRAVDYKGVEIARYTLSGNGTYQ GKISMLMGAVYRDDKYWKFNALGNPLDSDMNGVVGSFMK
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism. Also involved in phage inhibition (Phi) and colicin resistance (PacB) [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019303 - InterPro: IPR003325 [H]
Pfam domain/function: PF10138 Tellurium_res; PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 22552; Mature: 22421
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINLKKGQKILLDKSEYDLSRLTMGLGWDVAKYTGGLAGLFVNRSDFDLDGYAILLEEN CCCCCCCCCEEEEECCCCCHHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECC DKLKNYKEDVIYYGHLESKDKTIIHSGDNLTGEGEGDDEQIILKLNSIPEKYQKIILAVS CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH IYQAKERKQQFGMVENAFVRAVDYKGVEIARYTLSGNGTYQGKISMLMGAVYRDDKYWKF HHHHHHHHHHCCCHHHHHEEEECCCCEEEEEEEECCCCEEEEEHHHHHHHHCCCCCCEEE NALGNPLDSDMNGVVGSFMK ECCCCCCCCCHHHHHHHHCC >Mature Secondary Structure SINLKKGQKILLDKSEYDLSRLTMGLGWDVAKYTGGLAGLFVNRSDFDLDGYAILLEEN CCCCCCCCEEEEECCCCCHHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECC DKLKNYKEDVIYYGHLESKDKTIIHSGDNLTGEGEGDDEQIILKLNSIPEKYQKIILAVS CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH IYQAKERKQQFGMVENAFVRAVDYKGVEIARYTLSGNGTYQGKISMLMGAVYRDDKYWKF HHHHHHHHHHCCCHHHHHEEEECCCCEEEEEEEECCCCEEEEEHHHHHHHHCCCCCCEEE NALGNPLDSDMNGVVGSFMK ECCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA