Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is terX [H]

Identifier: 113478372

GI number: 113478372

Start: 7713511

End: 7714113

Strand: Reverse

Name: terX [H]

Synonym: Tery_5053

Alternate gene names: 113478372

Gene position: 7714113-7713511 (Counterclockwise)

Preceding gene: 113478374

Following gene: 113478371

Centisome position: 99.54

GC content: 30.18

Gene sequence:

>603_bases
ATGAGTATAAATCTTAAAAAAGGGCAAAAAATTTTACTTGATAAAAGTGAATATGATCTATCAAGACTGACAATGGGACT
AGGATGGGATGTAGCAAAGTATACAGGTGGTTTAGCTGGTTTATTCGTTAATAGATCGGATTTTGATCTGGATGGTTATG
CCATTTTATTAGAAGAGAATGATAAACTTAAAAACTACAAAGAAGATGTAATTTATTATGGTCATTTAGAATCTAAAGAT
AAGACAATAATTCATTCAGGAGATAATCTGACTGGAGAAGGAGAGGGAGATGATGAACAAATAATTTTGAAATTAAACTC
TATTCCTGAAAAATACCAAAAAATTATCTTAGCAGTAAGTATTTATCAAGCTAAAGAAAGGAAACAACAATTTGGAATGG
TAGAAAATGCTTTTGTTAGAGCTGTTGATTATAAAGGGGTAGAAATAGCAAGGTATACTTTATCTGGTAATGGCACTTAT
CAAGGTAAAATATCAATGTTAATGGGAGCAGTTTATAGAGACGATAAATATTGGAAATTTAACGCTTTAGGTAATCCTTT
GGATAGTGATATGAATGGTGTAGTAGGTTCATTTATGAAATAA

Upstream 100 bases:

>100_bases
AAAGATTGATTCACTTTTGTACAAAAAATTGATCAAACTGCTATAATTTATTATTAAATTTCATGAAAATTTTTTAGAGT
TTATATAGGGTAATAAATAT

Downstream 100 bases:

>100_bases
ATTTAGCTAGTTTTGGCAAATAATTAATAAAAAGCTTGAAATTGGAAACTAATCATTGAATTAATGAATCGTGAAAGTAT
ATAGAGAAAAACATTATGAA

Product: stress protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSINLKKGQKILLDKSEYDLSRLTMGLGWDVAKYTGGLAGLFVNRSDFDLDGYAILLEENDKLKNYKEDVIYYGHLESKD
KTIIHSGDNLTGEGEGDDEQIILKLNSIPEKYQKIILAVSIYQAKERKQQFGMVENAFVRAVDYKGVEIARYTLSGNGTY
QGKISMLMGAVYRDDKYWKFNALGNPLDSDMNGVVGSFMK

Sequences:

>Translated_200_residues
MSINLKKGQKILLDKSEYDLSRLTMGLGWDVAKYTGGLAGLFVNRSDFDLDGYAILLEENDKLKNYKEDVIYYGHLESKD
KTIIHSGDNLTGEGEGDDEQIILKLNSIPEKYQKIILAVSIYQAKERKQQFGMVENAFVRAVDYKGVEIARYTLSGNGTY
QGKISMLMGAVYRDDKYWKFNALGNPLDSDMNGVVGSFMK
>Mature_199_residues
SINLKKGQKILLDKSEYDLSRLTMGLGWDVAKYTGGLAGLFVNRSDFDLDGYAILLEENDKLKNYKEDVIYYGHLESKDK
TIIHSGDNLTGEGEGDDEQIILKLNSIPEKYQKIILAVSIYQAKERKQQFGMVENAFVRAVDYKGVEIARYTLSGNGTYQ
GKISMLMGAVYRDDKYWKFNALGNPLDSDMNGVVGSFMK

Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism. Also involved in phage inhibition (Phi) and colicin resistance (PacB) [H]

COG id: COG2310

COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CAPAB/TerDEXZ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019303
- InterPro:   IPR003325 [H]

Pfam domain/function: PF10138 Tellurium_res; PF02342 TerD [H]

EC number: NA

Molecular weight: Translated: 22552; Mature: 22421

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINLKKGQKILLDKSEYDLSRLTMGLGWDVAKYTGGLAGLFVNRSDFDLDGYAILLEEN
CCCCCCCCCEEEEECCCCCHHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECC
DKLKNYKEDVIYYGHLESKDKTIIHSGDNLTGEGEGDDEQIILKLNSIPEKYQKIILAVS
CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
IYQAKERKQQFGMVENAFVRAVDYKGVEIARYTLSGNGTYQGKISMLMGAVYRDDKYWKF
HHHHHHHHHHCCCHHHHHEEEECCCCEEEEEEEECCCCEEEEEHHHHHHHHCCCCCCEEE
NALGNPLDSDMNGVVGSFMK
ECCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SINLKKGQKILLDKSEYDLSRLTMGLGWDVAKYTGGLAGLFVNRSDFDLDGYAILLEEN
CCCCCCCCEEEEECCCCCHHHHHCCCCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECC
DKLKNYKEDVIYYGHLESKDKTIIHSGDNLTGEGEGDDEQIILKLNSIPEKYQKIILAVS
CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
IYQAKERKQQFGMVENAFVRAVDYKGVEIARYTLSGNGTYQGKISMLMGAVYRDDKYWKF
HHHHHHHHHHCCCHHHHHEEEECCCCEEEEEEEECCCCEEEEEHHHHHHHHCCCCCCEEE
NALGNPLDSDMNGVVGSFMK
ECCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA