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The map label for this gene is cpcE [H]

Identifier: 113478367

GI number: 113478367

Start: 7707694

End: 7708563

Strand: Reverse

Name: cpcE [H]

Synonym: Tery_5047

Alternate gene names: 113478367

Gene position: 7708563-7707694 (Counterclockwise)

Preceding gene: 113478368

Following gene: 113478366

Centisome position: 99.46

GC content: 37.59

Gene sequence:

>870_bases
ATGGAGCAGCAATATTTGGAATTACCATCATCAGAAGTATTAGAGAATAAAGAGTCTCTAAGTGTGCAAGAAGCGATCGC
TAATCTACAACATGAAGAATTAGGTAAACGATATTATGCTGCCTGGTGGTTAGGTAGGTTTAGAGTTAATACTCCCGATG
CTATTGAAGGTTTGGTTGCTGCATTGAAAGATGAGTCTGACCGTACAGAAAACGGTGGATATCCCCTAAGACGGAATGCT
GCTCGCGCTCTGGGTAAGTTAAAAGATAAAAAAGCTGTACCTGTTTTGATAGAGTGTTTGCAATGTTCTGACTATTATGT
ACGAGAAGCAGCAACAGAAGCATTAGAAATGTTAGGAGACCCTAGTTGTATTTCAGCGTTAATCAAACTTTTAGACGGAG
GTGTTGAAGCTGCAGTTTTATTTCCTGGTAAACCTCATTTGATTCAACCCTACGAAAATATTATCGAAGCTTTAGGAACA
CTACAGGCTGAAGAAGCAATTTTTCTAATTAAGCCTTTTATAGAACATCCTTCAGAAAAAGTACAATATGCTGCTGCTAG
GTCTTTGTATCAACTTACAGGAGAGGTAGTATATGGAGAATATTTGACTCAAGCATTAGAGGGTGATAACTTACATTTAC
GACGCTCCGCACTATTAGATTTAGCAGCTATTGGTTATTTACCGGCAGCTAAGGCAATATCAGAAACTTTAGCCGAAAAT
AGTATGAAATTAATTGCTCTGAAAGGACTTTTAGAGCATCACCTTACAATAAATTCAAAAGTTAAAACTCAAGAGTCAAA
GGTAGGATCTCAACTATTATTATCGGATGAGGCTATTGAGGTAATGACTCTAATGGACTCGCTTCTATAA

Upstream 100 bases:

>100_bases
TAAGAATACTGAAGTTCATTTTTTGATTCCAACTCTTAGGAAAGGCAATTGACCTGATTTTTTGGTTTTTATTTAAGAAA
AAGACTTTATAAATATAGGA

Downstream 100 bases:

>100_bases
AACCTTCATTGATACCTCTTATACTGAAAAGTGACTACAAAAATTTTTTTTTAGAAGCAATTTAAGTCTAAGTAATAATG
AATAATCAACTTTCAATAAT

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: Phycocyanin operon protein CpcE [H]

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MEQQYLELPSSEVLENKESLSVQEAIANLQHEELGKRYYAAWWLGRFRVNTPDAIEGLVAALKDESDRTENGGYPLRRNA
ARALGKLKDKKAVPVLIECLQCSDYYVREAATEALEMLGDPSCISALIKLLDGGVEAAVLFPGKPHLIQPYENIIEALGT
LQAEEAIFLIKPFIEHPSEKVQYAAARSLYQLTGEVVYGEYLTQALEGDNLHLRRSALLDLAAIGYLPAAKAISETLAEN
SMKLIALKGLLEHHLTINSKVKTQESKVGSQLLLSDEAIEVMTLMDSLL

Sequences:

>Translated_289_residues
MEQQYLELPSSEVLENKESLSVQEAIANLQHEELGKRYYAAWWLGRFRVNTPDAIEGLVAALKDESDRTENGGYPLRRNA
ARALGKLKDKKAVPVLIECLQCSDYYVREAATEALEMLGDPSCISALIKLLDGGVEAAVLFPGKPHLIQPYENIIEALGT
LQAEEAIFLIKPFIEHPSEKVQYAAARSLYQLTGEVVYGEYLTQALEGDNLHLRRSALLDLAAIGYLPAAKAISETLAEN
SMKLIALKGLLEHHLTINSKVKTQESKVGSQLLLSDEAIEVMTLMDSLL
>Mature_289_residues
MEQQYLELPSSEVLENKESLSVQEAIANLQHEELGKRYYAAWWLGRFRVNTPDAIEGLVAALKDESDRTENGGYPLRRNA
ARALGKLKDKKAVPVLIECLQCSDYYVREAATEALEMLGDPSCISALIKLLDGGVEAAVLFPGKPHLIQPYENIIEALGT
LQAEEAIFLIKPFIEHPSEKVQYAAARSLYQLTGEVVYGEYLTQALEGDNLHLRRSALLDLAAIGYLPAAKAISETLAEN
SMKLIALKGLLEHHLTINSKVKTQESKVGSQLLLSDEAIEVMTLMDSLL

Specific function: Required for the chromophorylation of the CpcA gene product [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcE/RpcE/PecE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004155 [H]

Pfam domain/function: PF03130 HEAT_PBS [H]

EC number: 4.-.-.-

Molecular weight: Translated: 31921; Mature: 31921

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQQYLELPSSEVLENKESLSVQEAIANLQHEELGKRYYAAWWLGRFRVNTPDAIEGLVA
CCCHHHCCCCHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH
ALKDESDRTENGGYPLRRNAARALGKLKDKKAVPVLIECLQCSDYYVREAATEALEMLGD
HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PSCISALIKLLDGGVEAAVLFPGKPHLIQPYENIIEALGTLQAEEAIFLIKPFIEHPSEK
CHHHHHHHHHHCCCCCEEEECCCCCCEECHHHHHHHHHHCCHHHHHHHEEEHHHHCCHHH
VQYAAARSLYQLTGEVVYGEYLTQALEGDNLHLRRSALLDLAAIGYLPAAKAISETLAEN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SMKLIALKGLLEHHLTINSKVKTQESKVGSQLLLSDEAIEVMTLMDSLL
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEQQYLELPSSEVLENKESLSVQEAIANLQHEELGKRYYAAWWLGRFRVNTPDAIEGLVA
CCCHHHCCCCHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHH
ALKDESDRTENGGYPLRRNAARALGKLKDKKAVPVLIECLQCSDYYVREAATEALEMLGD
HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PSCISALIKLLDGGVEAAVLFPGKPHLIQPYENIIEALGTLQAEEAIFLIKPFIEHPSEK
CHHHHHHHHHHCCCCCEEEECCCCCCEECHHHHHHHHHHCCHHHHHHHEEEHHHHCCHHH
VQYAAARSLYQLTGEVVYGEYLTQALEGDNLHLRRSALLDLAAIGYLPAAKAISETLAEN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SMKLIALKGLLEHHLTINSKVKTQESKVGSQLLLSDEAIEVMTLMDSLL
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3109890; 11237320; 11759840 [H]