The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is icfG [H]

Identifier: 113478338

GI number: 113478338

Start: 7663626

End: 7665005

Strand: Reverse

Name: icfG [H]

Synonym: Tery_5014

Alternate gene names: 113478338

Gene position: 7665005-7663626 (Counterclockwise)

Preceding gene: 113478339

Following gene: 113478337

Centisome position: 98.9

GC content: 38.19

Gene sequence:

>1380_bases
ATGGAATCTATAGAAGAAAACCTTAGAAAAGAACTAGATGGGTTGCGACAGGAAATGGCCAAAGTAGAAGAAGAACTAGC
AGCCTTCCGACTAGCCCAAAAGGTATTAACAGAAGTAACAACAGGATGCAACTCTAACCCAGGAGGGATTATTAGAGCAG
CTTTACAAAAAACTTTAGATGTTTGTGCTGATGTAACTGCAACTGAGAAGGGAAGTTTATTTTTACTAGATCCTACATCT
AAGAAAGTAGTAGACGCTATTCTTACTCGCACTGAAGTAACCTCAGAACAACGGGCTAAATTGATAGGTAATGTTAGAGA
CAAAGGGCTTGCAGGTTGGGTAAGTCGTCATCGTGAGATAGGATTAATTACAGATACAGAAGATGATGATCGTTGGTTAA
CTTTACCTAATCAACCTTACATCGTTCGTTCAGCATTGGGGGTTCCAATTATCAATGGTCAAGATTTGCTTGGTATTATT
ACTTTATTGCACTCTGAACCTAATCATTTTACTAAGAGAATGGCAGAGTCAATGGAGGCAACTGCAGAACACATAGGGTT
AGTTCTAGAAAATGCCAGACTTTATGGGCAACTAGATACTTATTCCAAAGCTCTTGACAATGAATTAGAAAAGGGTAGAC
AAATTCAGATAGATTTTCTTCCCTACGATATCCCTCAGTTGGATAATTGGGAAATAGTTGCCTGTTTTCATCCAGCAAAG
CAAGTAGCCGGAGATTTTTACGATGCTTTTACCCTGCCCAAGGATCAAATAGGGTTGGTTATAGCAGATGTTTGTGATAA
GGGAGTCGGTGCAGCATTGTTTATGGCTTTATTTCGCAGCTTAATTCGTATCTTTTCTGTTGGGGAAAGTAAATTACAAG
AAACTGCAACTTCAGTTAATTTAATTCACCAGAATGCTCTTCAAGCTGTTCGCCTTACTAATGACTACGTTGTGCAAAAC
CATTGGCAAATGAGTATGTTTGCTACATTATTTTTTGGGGTGCTAGATCCAGAGACAGGTTTAGTTAGTTATGTGAATGG
AGGACATGAACCACTTTTTATTATTAATCAAGATGGTATCATAAGGCAAATACTAAATTCTACTGGACCTGCTGTAGGGA
TGATGCCAAATATGAAGTTTGAAATTCAGGAAGTTAAGTTAGAGCCTGGAGAAATGCTCATAGGTTATACTGATGGCGTG
ACTGAAGCTAAATGTCCTGAAGGAAAGTTATTTACAGACAAAAGGCTGAAAGAATTGGTGGAAAAACCGGCTAATTCTGC
ATTAGAATTGATGAGTCGCATTAAAGAGAAATTATTTGATTATATAGCAGATGCAGCACAATTTGATGACATTACGGTGT
TAGCTGTGCGAAGAAGTTAG

Upstream 100 bases:

>100_bases
TTGATATTATAAATCAAAAAGGTAGGGCTAGGTTGCAATTATTTCCTAGTCATCAGTGCCTAGCCTCTATATTATTAATA
GGTTAAGGGTATTATCAACA

Downstream 100 bases:

>100_bases
ATCAAGCTATTAGTAAAAAGATCAAAAACAGGAGAATTTATGGAGGCATTAAAAGTACAAGGAAAGCTAGATAGTCTAGG
AAAAATTCGCGAATATGTTA

Product: serine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MESIEENLRKELDGLRQEMAKVEEELAAFRLAQKVLTEVTTGCNSNPGGIIRAALQKTLDVCADVTATEKGSLFLLDPTS
KKVVDAILTRTEVTSEQRAKLIGNVRDKGLAGWVSRHREIGLITDTEDDDRWLTLPNQPYIVRSALGVPIINGQDLLGII
TLLHSEPNHFTKRMAESMEATAEHIGLVLENARLYGQLDTYSKALDNELEKGRQIQIDFLPYDIPQLDNWEIVACFHPAK
QVAGDFYDAFTLPKDQIGLVIADVCDKGVGAALFMALFRSLIRIFSVGESKLQETATSVNLIHQNALQAVRLTNDYVVQN
HWQMSMFATLFFGVLDPETGLVSYVNGGHEPLFIINQDGIIRQILNSTGPAVGMMPNMKFEIQEVKLEPGEMLIGYTDGV
TEAKCPEGKLFTDKRLKELVEKPANSALELMSRIKEKLFDYIADAAQFDDITVLAVRRS

Sequences:

>Translated_459_residues
MESIEENLRKELDGLRQEMAKVEEELAAFRLAQKVLTEVTTGCNSNPGGIIRAALQKTLDVCADVTATEKGSLFLLDPTS
KKVVDAILTRTEVTSEQRAKLIGNVRDKGLAGWVSRHREIGLITDTEDDDRWLTLPNQPYIVRSALGVPIINGQDLLGII
TLLHSEPNHFTKRMAESMEATAEHIGLVLENARLYGQLDTYSKALDNELEKGRQIQIDFLPYDIPQLDNWEIVACFHPAK
QVAGDFYDAFTLPKDQIGLVIADVCDKGVGAALFMALFRSLIRIFSVGESKLQETATSVNLIHQNALQAVRLTNDYVVQN
HWQMSMFATLFFGVLDPETGLVSYVNGGHEPLFIINQDGIIRQILNSTGPAVGMMPNMKFEIQEVKLEPGEMLIGYTDGV
TEAKCPEGKLFTDKRLKELVEKPANSALELMSRIKEKLFDYIADAAQFDDITVLAVRRS
>Mature_459_residues
MESIEENLRKELDGLRQEMAKVEEELAAFRLAQKVLTEVTTGCNSNPGGIIRAALQKTLDVCADVTATEKGSLFLLDPTS
KKVVDAILTRTEVTSEQRAKLIGNVRDKGLAGWVSRHREIGLITDTEDDDRWLTLPNQPYIVRSALGVPIINGQDLLGII
TLLHSEPNHFTKRMAESMEATAEHIGLVLENARLYGQLDTYSKALDNELEKGRQIQIDFLPYDIPQLDNWEIVACFHPAK
QVAGDFYDAFTLPKDQIGLVIADVCDKGVGAALFMALFRSLIRIFSVGESKLQETATSVNLIHQNALQAVRLTNDYVVQN
HWQMSMFATLFFGVLDPETGLVSYVNGGHEPLFIINQDGIIRQILNSTGPAVGMMPNMKFEIQEVKLEPGEMLIGYTDGV
TEAKCPEGKLFTDKRLKELVEKPANSALELMSRIKEKLFDYIADAAQFDDITVLAVRRS

Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003660
- InterPro:   IPR001932
- InterPro:   IPR010822 [H]

Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]

EC number: NA

Molecular weight: Translated: 51081; Mature: 51081

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESIEENLRKELDGLRQEMAKVEEELAAFRLAQKVLTEVTTGCNSNPGGIIRAALQKTLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VCADVTATEKGSLFLLDPTSKKVVDAILTRTEVTSEQRAKLIGNVRDKGLAGWVSRHREI
HHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEE
GLITDTEDDDRWLTLPNQPYIVRSALGVPIINGQDLLGIITLLHSEPNHFTKRMAESMEA
EEEECCCCCCCEEECCCCCEEEEHHCCCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHH
TAEHIGLVLENARLYGQLDTYSKALDNELEKGRQIQIDFLPYDIPQLDNWEIVACFHPAK
HHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCHH
QVAGDFYDAFTLPKDQIGLVIADVCDKGVGAALFMALFRSLIRIFSVGESKLQETATSVN
HHHHHHHHHHCCCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LIHQNALQAVRLTNDYVVQNHWQMSMFATLFFGVLDPETGLVSYVNGGHEPLFIINQDGI
HHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCEEHEECCCCCEEEEECCCHH
IRQILNSTGPAVGMMPNMKFEIQEVKLEPGEMLIGYTDGVTEAKCPEGKLFTDKRLKELV
HHHHHHCCCCCEECCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
EKPANSALELMSRIKEKLFDYIADAAQFDDITVLAVRRS
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure
MESIEENLRKELDGLRQEMAKVEEELAAFRLAQKVLTEVTTGCNSNPGGIIRAALQKTLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VCADVTATEKGSLFLLDPTSKKVVDAILTRTEVTSEQRAKLIGNVRDKGLAGWVSRHREI
HHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEE
GLITDTEDDDRWLTLPNQPYIVRSALGVPIINGQDLLGIITLLHSEPNHFTKRMAESMEA
EEEECCCCCCCEEECCCCCEEEEHHCCCCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHH
TAEHIGLVLENARLYGQLDTYSKALDNELEKGRQIQIDFLPYDIPQLDNWEIVACFHPAK
HHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEECCHH
QVAGDFYDAFTLPKDQIGLVIADVCDKGVGAALFMALFRSLIRIFSVGESKLQETATSVN
HHHHHHHHHHCCCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LIHQNALQAVRLTNDYVVQNHWQMSMFATLFFGVLDPETGLVSYVNGGHEPLFIINQDGI
HHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCEEHEECCCCCEEEEECCCHH
IRQILNSTGPAVGMMPNMKFEIQEVKLEPGEMLIGYTDGVTEAKCPEGKLFTDKRLKELV
HHHHHHCCCCCEECCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
EKPANSALELMSRIKEKLFDYIADAAQFDDITVLAVRRS
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8075401; 8905231 [H]