| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is psaK [H]
Identifier: 113478197
GI number: 113478197
Start: 7440394
End: 7440654
Strand: Reverse
Name: psaK [H]
Synonym: Tery_4846
Alternate gene names: 113478197
Gene position: 7440654-7440394 (Counterclockwise)
Preceding gene: 113478199
Following gene: 113478196
Centisome position: 96.01
GC content: 41.76
Gene sequence:
>261_bases ATGCTTTACTCAACCTTATTAACACTTGGCCCCAATACTTTTGACTGGAGCCCTAAAATTGCCATAATTATGATTATCTG TAATATTGTAGCCATCGCCTTTGCCAAGTTCACAGTTAAATACCCTAGTGTCGGTCCAGCCATGCCTGGTTCTAACTTTT TTGGTGGTTTTGGAGTAGCTGGCGTTTTGGCAACTACAAGCTTCGGTCATATTTTAGGTGCTGGTGTGATTCTTGGGTTG GCAAATTTAGGTAGCCTTTGA
Upstream 100 bases:
>100_bases ATTATTGCATAGTCTGACAAGAAGAAAAAAAAGAACAATTTTCTGATATAAGATATGGTAGTGAAGTTTTCAATGTACAG ATAAGATAGGACAAGAAAAA
Downstream 100 bases:
>100_bases CATCCTCTCAGGCTATTATAGATGGGGAAAAACCGAGCAAAAAGCCAAGGCAGGGTTGACGTTTTGCTGGTGCAAAGTTC TGTTAACACAAGCTTGTGCA
Product: photosystem I reaction center subunit X
Products: NA
Alternate protein names: Photosystem I subunit X [H]
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MLYSTLLTLGPNTFDWSPKIAIIMIICNIVAIAFAKFTVKYPSVGPAMPGSNFFGGFGVAGVLATTSFGHILGAGVILGL ANLGSL
Sequences:
>Translated_86_residues MLYSTLLTLGPNTFDWSPKIAIIMIICNIVAIAFAKFTVKYPSVGPAMPGSNFFGGFGVAGVLATTSFGHILGAGVILGL ANLGSL >Mature_86_residues MLYSTLLTLGPNTFDWSPKIAIIMIICNIVAIAFAKFTVKYPSVGPAMPGSNFFGGFGVAGVLATTSFGHILGAGVILGL ANLGSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaG/psaK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000549 - InterPro: IPR017492 [H]
Pfam domain/function: PF01241 PSI_PSAK [H]
EC number: NA
Molecular weight: Translated: 8835; Mature: 8835
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYSTLLTLGPNTFDWSPKIAIIMIICNIVAIAFAKFTVKYPSVGPAMPGSNFFGGFGVA CCCHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHH GVLATTSFGHILGAGVILGLANLGSL HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLYSTLLTLGPNTFDWSPKIAIIMIICNIVAIAFAKFTVKYPSVGPAMPGSNFFGGFGVA CCCHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHH GVLATTSFGHILGAGVILGLANLGSL HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA