The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113478173

Identifier: 113478173

GI number: 113478173

Start: 7402563

End: 7403309

Strand: Reverse

Name: 113478173

Synonym: Tery_4814

Alternate gene names: NA

Gene position: 7403309-7402563 (Counterclockwise)

Preceding gene: 113478174

Following gene: 113478172

Centisome position: 95.53

GC content: 29.72

Gene sequence:

>747_bases
ATGAGTAGAACACTAGTATTTATTTATGGTATAGTTTGTTATTTAATATCATTGATGACTTTTCTGTATACCATTGGTTT
TGTGGGCAATTTAATAGTACCAAAAACACTAGATTTAAACTTAGATGGTTCTCTGATTAAGGGGTTATTAATTGATATTT
TATTAATCTTTTTGTTTGGTGTTCAACATAGTATTATGGCACGTCAAAGTTTCAAAAAATGGTGGACTAAAATAATTCCA
GAAGTTATAGAACGTAGCACTTATGTTTTGATGGCAAGCCTAGTATTATTACTGTTATGTTGGCAATGGTCTTCTTTTGG
TGGAATTATCTGGAATATACAAAACCCAATAATTTTTAACGTTATTTATGGCATTTTTGCCGTGGGATGGTTAATTGTTT
TTCTTAGCACTTTTATGATTAACCATTTTGATTTATTCGGCTTGCGACAAGTATATTTATATTGGCGTGGTCAGGAATAT
GAAGATTTAGAATTCAGAAATCCAGGGTTTTATAAATATATTCGCCATCCAATTATGTTAGGTTTTCTTATTGCTTTTTG
GGCAACTCCATTAATGACAAGTTCTCATCTAGTTTTTGCTATAGGTATCACAATTTATGTATTAATAGGTATTAAATTAG
AAGAGGTAGATATGATTTCTATTTATGGAAATTTATATCAGGAATATCGCCAGCAAGTTTCTATGTTAATTCCTGTGCCC
AAAATAAAATTTATCAAGCATAAATAG

Upstream 100 bases:

>100_bases
ATTTAGTATTACTTAAAAATTTAAATTTTACCATTGGTATGAAGCTGCTTTAATTACTCAAATAATTTTATCAAAGTTAT
GGAGATTTTGTAGGATAAAA

Downstream 100 bases:

>100_bases
ATAAAAAAATTAGGGTTATTCCTGATTTTTTCTCGGGACTAGATATAGATATGTAGATATGAATATATTCTATATAGATA
GCAAAAAACATTGAGTGAAT

Product: putative integral membrane protein

Products: NA

Alternate protein names: Conserved Integral Membrane Protein; Conserved Membrane Protein; S-Isoprenylcysteine O-Methyltransferase; Protein-S-Isoprenylcysteine Methyltransferase

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSRTLVFIYGIVCYLISLMTFLYTIGFVGNLIVPKTLDLNLDGSLIKGLLIDILLIFLFGVQHSIMARQSFKKWWTKIIP
EVIERSTYVLMASLVLLLLCWQWSSFGGIIWNIQNPIIFNVIYGIFAVGWLIVFLSTFMINHFDLFGLRQVYLYWRGQEY
EDLEFRNPGFYKYIRHPIMLGFLIAFWATPLMTSSHLVFAIGITIYVLIGIKLEEVDMISIYGNLYQEYRQQVSMLIPVP
KIKFIKHK

Sequences:

>Translated_248_residues
MSRTLVFIYGIVCYLISLMTFLYTIGFVGNLIVPKTLDLNLDGSLIKGLLIDILLIFLFGVQHSIMARQSFKKWWTKIIP
EVIERSTYVLMASLVLLLLCWQWSSFGGIIWNIQNPIIFNVIYGIFAVGWLIVFLSTFMINHFDLFGLRQVYLYWRGQEY
EDLEFRNPGFYKYIRHPIMLGFLIAFWATPLMTSSHLVFAIGITIYVLIGIKLEEVDMISIYGNLYQEYRQQVSMLIPVP
KIKFIKHK
>Mature_247_residues
SRTLVFIYGIVCYLISLMTFLYTIGFVGNLIVPKTLDLNLDGSLIKGLLIDILLIFLFGVQHSIMARQSFKKWWTKIIPE
VIERSTYVLMASLVLLLLCWQWSSFGGIIWNIQNPIIFNVIYGIFAVGWLIVFLSTFMINHFDLFGLRQVYLYWRGQEYE
DLEFRNPGFYKYIRHPIMLGFLIAFWATPLMTSSHLVFAIGITIYVLIGIKLEEVDMISIYGNLYQEYRQQVSMLIPVPK
IKFIKHK

Specific function: Unknown

COG id: COG2020

COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI21358557, Length=231, Percent_Identity=26.8398268398268, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29007; Mature: 28876

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHCCCC
>Mature Secondary Structure 
SRTLVFIYGIVCYLISLMTFLYTIGFVGNLIVPKTLDLNLDGSLIKGLLIDILLIFLFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHH
VQHSIMARQSFKKWWTKIIPEVIERSTYVLMASLVLLLLCWQWSSFGGIIWNIQNPIIFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH
VIYGIFAVGWLIVFLSTFMINHFDLFGLRQVYLYWRGQEYEDLEFRNPGFYKYIRHPIML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHH
GFLIAFWATPLMTSSHLVFAIGITIYVLIGIKLEEVDMISIYGNLYQEYRQQVSMLIPVP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KIKFIKHK
CCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA