Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478152

Identifier: 113478152

GI number: 113478152

Start: 7361510

End: 7361908

Strand: Reverse

Name: 113478152

Synonym: Tery_4789

Alternate gene names: NA

Gene position: 7361908-7361510 (Counterclockwise)

Preceding gene: 113478154

Following gene: 113478151

Centisome position: 94.99

GC content: 43.36

Gene sequence:

>399_bases
ATGGAAACATTAGCATTTTCCCATTTAGCCTATAGCGCAGAAAATTCAGAGAATCAAGAGTTTACTGTTTGTGTAGACTT
TAAAAAACTATCTAGCGTTGGTGCAATGGGTTTACTGTCTGCTGCTACTGTATTCGGAGCAATGGGCGTAACTGCTGATT
CTGCTTCTGCTTATGGTGGTTATGGTTATGGTGGCTACGGTGACTACGGTGGCTATGGTAGTAACTATGGTAACCATGGT
AACTATGGTCGTAATTCTGGTCACTACTATAAAAAAGTTGTTAGTAGTTCCTACAATCGTTCCTATGGTAATTATGGTAA
CTACGGTGGTTCTCGTGGCTATGGTAGTCGCTATGGTGGCTACGGTGGTGGCTACGGTGGCTACGGTGGCTGCTACTAA

Upstream 100 bases:

>100_bases
AGTCCTGCTTTATGGGCTTCTTTGAATTGGGATGTAATTATTAGTTAGGTAAAATCCAGTTTTGCAGTAGTTCATTTAAT
TTGACTAAACAGAGGAATTT

Downstream 100 bases:

>100_bases
GTTGGTTTATTAAAAGTCCACAAATAAATACAGAGTTGGTTGGGACTTTTTAAGTTTTTTTAAACATTCTGCATTAAAAA
TCTATCTGATATGGTAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
METLAFSHLAYSAENSENQEFTVCVDFKKLSSVGAMGLLSAATVFGAMGVTADSASAYGGYGYGGYGDYGGYGSNYGNHG
NYGRNSGHYYKKVVSSSYNRSYGNYGNYGGSRGYGSRYGGYGGGYGGYGGCY

Sequences:

>Translated_132_residues
METLAFSHLAYSAENSENQEFTVCVDFKKLSSVGAMGLLSAATVFGAMGVTADSASAYGGYGYGGYGDYGGYGSNYGNHG
NYGRNSGHYYKKVVSSSYNRSYGNYGNYGGSRGYGSRYGGYGGGYGGYGGCY
>Mature_132_residues
METLAFSHLAYSAENSENQEFTVCVDFKKLSSVGAMGLLSAATVFGAMGVTADSASAYGGYGYGGYGDYGGYGSNYGNHG
NYGRNSGHYYKKVVSSSYNRSYGNYGNYGGSRGYGSRYGGYGGGYGGYGGCY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13793; Mature: 13793

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLAFSHLAYSAENSENQEFTVCVDFKKLSSVGAMGLLSAATVFGAMGVTADSASAYGG
CCCCCCHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YGYGGYGDYGGYGSNYGNHGNYGRNSGHYYKKVVSSSYNRSYGNYGNYGGSRGYGSRYGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
YGGGYGGYGGCY
CCCCCCCCCCCC
>Mature Secondary Structure
METLAFSHLAYSAENSENQEFTVCVDFKKLSSVGAMGLLSAATVFGAMGVTADSASAYGG
CCCCCCHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
YGYGGYGDYGGYGSNYGNHGNYGRNSGHYYKKVVSSSYNRSYGNYGNYGGSRGYGSRYGG
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
YGGGYGGYGGCY
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA