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The map label for this gene is ycfF [C]

Identifier: 113478130

GI number: 113478130

Start: 7317337

End: 7317684

Strand: Reverse

Name: ycfF [C]

Synonym: Tery_4764

Alternate gene names: 113478130

Gene position: 7317684-7317337 (Counterclockwise)

Preceding gene: 113478132

Following gene: 113478129

Centisome position: 94.42

GC content: 40.23

Gene sequence:

>348_bases
ATGAGCGAGCAAGACACTATTTTCAGTAAGATTATACGGCGGGAAATTCCAGCGGATATTATTTATGAGGATGAAACAAC
CTTGGCTTTCAAAGATATTAATCCTCAAGCTCCTATTCATATCCTGGTAATTCCGAAAAAGCCTATCCCCAATTTAGCCA
ATGCCACATCTGAAGACCACATTTTGATGGGAAACTTATTGTTAACAGCAAAGCAGGTTGCACAAGAGCAAGGACTACAA
AATGGCTATCGTGTGGTTATTAATAATGGGATAGATGCTGGTCAAACCGTATTTCATTTACATCTTCATATTCTTGGAGG
TCGTCCAATGCAGTGGCCTCCAGGCTAA

Upstream 100 bases:

>100_bases
CCTCAATGCCTATTATTGATGCACTCCATACTCTAGCTAGCATATTCCCATATTTTTATGTATTCTTAAATTTGTATAAC
AAGTTGTTTGAAATTGATAA

Downstream 100 bases:

>100_bases
TTCAAGATTACAAGATTAATAATGTAGTAGGGGCAGGTTCAGCTATAAAGGTGAGAGGACGACTAAGTATCTAATCTCAA
AATCTTTCCCTCTCTAAGTT

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSEQDTIFSKIIRREIPADIIYEDETTLAFKDINPQAPIHILVIPKKPIPNLANATSEDHILMGNLLLTAKQVAQEQGLQ
NGYRVVINNGIDAGQTVFHLHLHILGGRPMQWPPG

Sequences:

>Translated_115_residues
MSEQDTIFSKIIRREIPADIIYEDETTLAFKDINPQAPIHILVIPKKPIPNLANATSEDHILMGNLLLTAKQVAQEQGLQ
NGYRVVINNGIDAGQTVFHLHLHILGGRPMQWPPG
>Mature_114_residues
SEQDTIFSKIIRREIPADIIYEDETTLAFKDINPQAPIHILVIPKKPIPNLANATSEDHILMGNLLLTAKQVAQEQGLQN
GYRVVINNGIDAGQTVFHLHLHILGGRPMQWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI14211923, Length=110, Percent_Identity=59.0909090909091, Blast_Score=152, Evalue=7e-38,
Organism=Homo sapiens, GI4885413, Length=111, Percent_Identity=58.5585585585586, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI1787346, Length=108, Percent_Identity=47.2222222222222, Blast_Score=107, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17506713, Length=111, Percent_Identity=63.0630630630631, Blast_Score=157, Evalue=7e-40,
Organism=Drosophila melanogaster, GI28574010, Length=114, Percent_Identity=57.8947368421053, Blast_Score=149, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24581222, Length=114, Percent_Identity=57.8947368421053, Blast_Score=149, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12811; Mature: 12680

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQDTIFSKIIRREIPADIIYEDETTLAFKDINPQAPIHILVIPKKPIPNLANATSEDH
CCCHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCE
ILMGNLLLTAKQVAQEQGLQNGYRVVINNGIDAGQTVFHLHLHILGGRPMQWPPG
EEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SEQDTIFSKIIRREIPADIIYEDETTLAFKDINPQAPIHILVIPKKPIPNLANATSEDH
CCHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCE
ILMGNLLLTAKQVAQEQGLQNGYRVVINNGIDAGQTVFHLHLHILGGRPMQWPPG
EEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]