Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113478028

Identifier: 113478028

GI number: 113478028

Start: 7141761

End: 7143971

Strand: Reverse

Name: 113478028

Synonym: Tery_4645

Alternate gene names: NA

Gene position: 7143971-7141761 (Counterclockwise)

Preceding gene: 113478032

Following gene: 113478027

Centisome position: 92.18

GC content: 44.23

Gene sequence:

>2211_bases
ATGACTACAACAACTCCAAAACCAACAACAGTCCCGGATTTTTGTGAAGGTATCCAATATTTTGGAAAAGCTTGGCCTGA
TTTTGAAACCTACGGTAAAACACCAGCAATAGCAGAAGGAAGTAAAGCGATCGCTTCACCAAGTGACCCTACTGGCATAT
ATCAAACCCTCCTCTACGCTGATGCTCTGCGTTATTTAATGTTACAAGTAACAGGCAGCAAAGCATCAGGACACCCAGGC
GGTTTTGCCAGTCAAGCCGAAGCTTATGCAGCCCTAGTAATGTTAGGCTACAAAAATATTCTCACAGAGGTCGGACACCA
CGCCCCCGGATTTTATAGCGCTGTATTTCTTGACCGCTCCCTAGAAGATATGAAAATCTTCAGTGTCCAACAAATGCGCG
ATCGCTTCCGGGAAATGCACGGACTCCTCGGACACCTATCTGGCTATATTCCTGGTTTACTCAACCCTGCCGGGCCACTG
GGACAAGGTCAACATTTCGCCATGGCAGCAGCATTATTACATCAAAACACCCTATTTCCTTTCACCTTAGGGGACGGTGG
TATGGGAGAACCATATCCAGTCAGCAGTATGATGCACTTTAACACTGCCTATCCTAATGTTACCAACTTTTTACCAGTAT
TAGTATGGAACGGTTATAGTCAAGAACACCACAGCATGGTTTCCACAAAAAGTAATGCAGAAATGATTAGCTACTGGAAA
GGCAACGGTTTTGCAGAAGTCATACTGGTAGATGCTAAGGACTTCGACGACCAAAACCAACCAGGAGACTATATTGACAG
TAGTGCCTTCTCTTTAGAAAAACGCCTAGAATTTACCAAAGCGGTATTAGAAAATGTTGACAAAGCAGCAAAATCTGCTC
TTGATGGTAAACTCACGATTTTTATTATCAAACAACTCAAGGGGGCCGGGGTTCACGCCAGAGGTTCAAAATCTCACAAC
CTCTATCCTAAAGACACCCTCGATAGTCCCCAAATTATCAATACTCTCAAAGAACGTGCCTTATCAGTAGCAGCTTGGGA
GTTAGTACGAAAAAATTGCGAACGTGCTGGTGGAGGTCCGGCATCTAAGACTGTTGTGACTGAATTTGAGTATCCACTAA
CAGAATTAGGTCAACTACCTTTAGAAGAATATACAGTTGGTGGGGACCCCAAAGTTGCCACAACTGCCATGGGAGCATTA
ATAGCTCATGTCGGTCAAAAAGACCCTCATTTCTTGCTAACAAATGCTGATGGTAACGCTGCATCAGGTATTAATAATGT
TAACCAAGCATTGAAAATTATTCACCCCACCCCTGACGATATTTATTTCCAAGGTCCAGGAGGTCAGGTTTATGAACCTT
TGAGCGAAGACGCTTGTGCTGGAATGGCTGCTGCTTTAGCATTGATGGGAGCCCGGACAGTTTGGTGTTCTTATGAATCT
TTTGCTATTAACGGGGTACCTATTTGGCAAACTGTTACTCAAGCAATGGCGGAGTTACGTCACCTGACTCCTTCGACAAT
TACATTATTTACTGCTGGAGCATTGGAACAGGGGCGCAATGGTTGGACTCACCAACGCCCGGAAATTGAAGCTTATTTTG
CTGCGATGATGCGGAATGGAAATGTGTTCGCCCTTTTCCCACCTGATGCTAATAGTATTCAAGTTTGTTATGACTGGGCG
CTGAGTACTAAAAATAAGGGTGTGACTATTACTGCTAGTAAGTCACCTTTACCTATTCGGACTACTTTTGAACAGGCAAG
ACAAGGGTTAAAGGATGGTGCTGTTATTCTTCAAGAGGTTAAAGGGGGTCAGACTGTTGTGTTTGCAGTACTGGGAGATC
TGCCATTAATTCCAGTATTTGAAGCTGCTGCCTATTTGGAAACTAAAGGTATTGGGGTACGGATAGTTTCAGTAATTAAT
CCCCGGCGCTTGTACCGTCCCCAGGATACAGGTTGGAATACTTGTTCTGAAGCTGATGGCGGTTTTTTGGATGATGCTGG
TTTTGAGGAATTATTCGGTGGTGATGCTTTAATTGCTGTGACTGGTGGCGCCAGTTTGATGTTAGAACCAATTATGTTAC
GGAGTCAGGTTAAGCGGGATACCTTTGCTTGGCGTCGAGGGGAGACTGCTTCTAGTGCTGGTGAGGTGATGGCTTTTAAT
GGTATTACTGCTGAAACTTTGACTAAGCGGGCTATCGAATTAGTAGATTAA

Upstream 100 bases:

>100_bases
TAGTATTATTACTACATCAAATAATTAGTCAAAAGAAATTAAAATCGATCCCCGTAGATGTTAAATTGAGATAAAAAGAG
CAAAATACAGGAAAATTGCT

Downstream 100 bases:

>100_bases
ATTTTAGGGGTTTAGTTGTAAGCATTCAGCTATTAGCTAGAAGGAGGTGAAATGCCTCCAATAATAACAGGACTTACGTA
CGAGCACTACACCCAGTGAG

Product: transketolase, central region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 736; Mature: 735

Protein sequence:

>736_residues
MTTTTPKPTTVPDFCEGIQYFGKAWPDFETYGKTPAIAEGSKAIASPSDPTGIYQTLLYADALRYLMLQVTGSKASGHPG
GFASQAEAYAALVMLGYKNILTEVGHHAPGFYSAVFLDRSLEDMKIFSVQQMRDRFREMHGLLGHLSGYIPGLLNPAGPL
GQGQHFAMAAALLHQNTLFPFTLGDGGMGEPYPVSSMMHFNTAYPNVTNFLPVLVWNGYSQEHHSMVSTKSNAEMISYWK
GNGFAEVILVDAKDFDDQNQPGDYIDSSAFSLEKRLEFTKAVLENVDKAAKSALDGKLTIFIIKQLKGAGVHARGSKSHN
LYPKDTLDSPQIINTLKERALSVAAWELVRKNCERAGGGPASKTVVTEFEYPLTELGQLPLEEYTVGGDPKVATTAMGAL
IAHVGQKDPHFLLTNADGNAASGINNVNQALKIIHPTPDDIYFQGPGGQVYEPLSEDACAGMAAALALMGARTVWCSYES
FAINGVPIWQTVTQAMAELRHLTPSTITLFTAGALEQGRNGWTHQRPEIEAYFAAMMRNGNVFALFPPDANSIQVCYDWA
LSTKNKGVTITASKSPLPIRTTFEQARQGLKDGAVILQEVKGGQTVVFAVLGDLPLIPVFEAAAYLETKGIGVRIVSVIN
PRRLYRPQDTGWNTCSEADGGFLDDAGFEELFGGDALIAVTGGASLMLEPIMLRSQVKRDTFAWRRGETASSAGEVMAFN
GITAETLTKRAIELVD

Sequences:

>Translated_736_residues
MTTTTPKPTTVPDFCEGIQYFGKAWPDFETYGKTPAIAEGSKAIASPSDPTGIYQTLLYADALRYLMLQVTGSKASGHPG
GFASQAEAYAALVMLGYKNILTEVGHHAPGFYSAVFLDRSLEDMKIFSVQQMRDRFREMHGLLGHLSGYIPGLLNPAGPL
GQGQHFAMAAALLHQNTLFPFTLGDGGMGEPYPVSSMMHFNTAYPNVTNFLPVLVWNGYSQEHHSMVSTKSNAEMISYWK
GNGFAEVILVDAKDFDDQNQPGDYIDSSAFSLEKRLEFTKAVLENVDKAAKSALDGKLTIFIIKQLKGAGVHARGSKSHN
LYPKDTLDSPQIINTLKERALSVAAWELVRKNCERAGGGPASKTVVTEFEYPLTELGQLPLEEYTVGGDPKVATTAMGAL
IAHVGQKDPHFLLTNADGNAASGINNVNQALKIIHPTPDDIYFQGPGGQVYEPLSEDACAGMAAALALMGARTVWCSYES
FAINGVPIWQTVTQAMAELRHLTPSTITLFTAGALEQGRNGWTHQRPEIEAYFAAMMRNGNVFALFPPDANSIQVCYDWA
LSTKNKGVTITASKSPLPIRTTFEQARQGLKDGAVILQEVKGGQTVVFAVLGDLPLIPVFEAAAYLETKGIGVRIVSVIN
PRRLYRPQDTGWNTCSEADGGFLDDAGFEELFGGDALIAVTGGASLMLEPIMLRSQVKRDTFAWRRGETASSAGEVMAFN
GITAETLTKRAIELVD
>Mature_735_residues
TTTTPKPTTVPDFCEGIQYFGKAWPDFETYGKTPAIAEGSKAIASPSDPTGIYQTLLYADALRYLMLQVTGSKASGHPGG
FASQAEAYAALVMLGYKNILTEVGHHAPGFYSAVFLDRSLEDMKIFSVQQMRDRFREMHGLLGHLSGYIPGLLNPAGPLG
QGQHFAMAAALLHQNTLFPFTLGDGGMGEPYPVSSMMHFNTAYPNVTNFLPVLVWNGYSQEHHSMVSTKSNAEMISYWKG
NGFAEVILVDAKDFDDQNQPGDYIDSSAFSLEKRLEFTKAVLENVDKAAKSALDGKLTIFIIKQLKGAGVHARGSKSHNL
YPKDTLDSPQIINTLKERALSVAAWELVRKNCERAGGGPASKTVVTEFEYPLTELGQLPLEEYTVGGDPKVATTAMGALI
AHVGQKDPHFLLTNADGNAASGINNVNQALKIIHPTPDDIYFQGPGGQVYEPLSEDACAGMAAALALMGARTVWCSYESF
AINGVPIWQTVTQAMAELRHLTPSTITLFTAGALEQGRNGWTHQRPEIEAYFAAMMRNGNVFALFPPDANSIQVCYDWAL
STKNKGVTITASKSPLPIRTTFEQARQGLKDGAVILQEVKGGQTVVFAVLGDLPLIPVFEAAAYLETKGIGVRIVSVINP
RRLYRPQDTGWNTCSEADGGFLDDAGFEELFGGDALIAVTGGASLMLEPIMLRSQVKRDTFAWRRGETASSAGEVMAFNG
ITAETLTKRAIELVD

Specific function: Unknown

COG id: COG3957

COG function: function code G; Phosphoketolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the XFP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005593
- InterPro:   IPR018969
- InterPro:   IPR019790
- InterPro:   IPR018970
- InterPro:   IPR019789 [H]

Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]

EC number: NA

Molecular weight: Translated: 79664; Mature: 79533

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTTPKPTTVPDFCEGIQYFGKAWPDFETYGKTPAIAEGSKAIASPSDPTGIYQTLLYA
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
DALRYLMLQVTGSKASGHPGGFASQAEAYAALVMLGYKNILTEVGHHAPGFYSAVFLDRS
HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
LEDMKIFSVQQMRDRFREMHGLLGHLSGYIPGLLNPAGPLGQGQHFAMAAALLHQNTLFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCE
FTLGDGGMGEPYPVSSMMHFNTAYPNVTNFLPVLVWNGYSQEHHSMVSTKSNAEMISYWK
EECCCCCCCCCCCCCHHHCCCCCCCCHHHCCEEEEECCCCHHHHHHHHCCCCCCEEEEEC
GNGFAEVILVDAKDFDDQNQPGDYIDSSAFSLEKRLEFTKAVLENVDKAAKSALDGKLTI
CCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
FIIKQLKGAGVHARGSKSHNLYPKDTLDSPQIINTLKERALSVAAWELVRKNCERAGGGP
EEEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ASKTVVTEFEYPLTELGQLPLEEYTVGGDPKVATTAMGALIAHVGQKDPHFLLTNADGNA
CCCCEEEECCCCHHHHCCCCHHHEECCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCC
ASGINNVNQALKIIHPTPDDIYFQGPGGQVYEPLSEDACAGMAAALALMGARTVWCSYES
CCCHHHHHHHHEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEECCCC
FAINGVPIWQTVTQAMAELRHLTPSTITLFTAGALEQGRNGWTHQRPEIEAYFAAMMRNG
EEECCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHCCC
NVFALFPPDANSIQVCYDWALSTKNKGVTITASKSPLPIRTTFEQARQGLKDGAVILQEV
CEEEEECCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHC
KGGQTVVFAVLGDLPLIPVFEAAAYLETKGIGVRIVSVINPRRLYRPQDTGWNTCSEADG
CCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCC
GFLDDAGFEELFGGDALIAVTGGASLMLEPIMLRSQVKRDTFAWRRGETASSAGEVMAFN
CCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
GITAETLTKRAIELVD
CCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TTTTPKPTTVPDFCEGIQYFGKAWPDFETYGKTPAIAEGSKAIASPSDPTGIYQTLLYA
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
DALRYLMLQVTGSKASGHPGGFASQAEAYAALVMLGYKNILTEVGHHAPGFYSAVFLDRS
HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
LEDMKIFSVQQMRDRFREMHGLLGHLSGYIPGLLNPAGPLGQGQHFAMAAALLHQNTLFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCE
FTLGDGGMGEPYPVSSMMHFNTAYPNVTNFLPVLVWNGYSQEHHSMVSTKSNAEMISYWK
EECCCCCCCCCCCCCHHHCCCCCCCCHHHCCEEEEECCCCHHHHHHHHCCCCCCEEEEEC
GNGFAEVILVDAKDFDDQNQPGDYIDSSAFSLEKRLEFTKAVLENVDKAAKSALDGKLTI
CCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
FIIKQLKGAGVHARGSKSHNLYPKDTLDSPQIINTLKERALSVAAWELVRKNCERAGGGP
EEEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ASKTVVTEFEYPLTELGQLPLEEYTVGGDPKVATTAMGALIAHVGQKDPHFLLTNADGNA
CCCCEEEECCCCHHHHCCCCHHHEECCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCC
ASGINNVNQALKIIHPTPDDIYFQGPGGQVYEPLSEDACAGMAAALALMGARTVWCSYES
CCCHHHHHHHHEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEECCCC
FAINGVPIWQTVTQAMAELRHLTPSTITLFTAGALEQGRNGWTHQRPEIEAYFAAMMRNG
EEECCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHCCC
NVFALFPPDANSIQVCYDWALSTKNKGVTITASKSPLPIRTTFEQARQGLKDGAVILQEV
CEEEEECCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCHHHHHHC
KGGQTVVFAVLGDLPLIPVFEAAAYLETKGIGVRIVSVINPRRLYRPQDTGWNTCSEADG
CCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCCC
GFLDDAGFEELFGGDALIAVTGGASLMLEPIMLRSQVKRDTFAWRRGETASSAGEVMAFN
CCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
GITAETLTKRAIELVD
CCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA