| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is banIIIM [H]
Identifier: 113477986
GI number: 113477986
Start: 7070386
End: 7071636
Strand: Reverse
Name: banIIIM [H]
Synonym: Tery_4598
Alternate gene names: 113477986
Gene position: 7071636-7070386 (Counterclockwise)
Preceding gene: 113477993
Following gene: 113477985
Centisome position: 91.25
GC content: 31.65
Gene sequence:
>1251_bases ATGAAAATAGAATCTTCAGCCTGGAATCATCAAACTCAATATTCAGCACAACAGCGTAAATTATTAGGTGTTCATTATAC CCCTGATAACCTGATTGATTATATTGTTAGTCACACCCTATTCTCTTATTTGGACAAAAACAAATTCACGCCGTTGGACA AAATCAAAATACTCGATCCAGCTTGTGGTTCTGGGTTATTTCTGCTCAAAGCCTTTGATTTACTTTGTTCATTGTGGCAA AAGCAGTTTGGACAACTAAAACCTCAAGATATTCGCCATATTTTAGAAAATAATTTGTATGGTGTTGATATTGAAAATAA TGCTGTACATGAAGCTAAAAAACAACTCAAAAATAAAGCAAACTTACTGGGGGTTAAAGAGGTAAATATCCCAATTTTTC AAGGTGATGCTTTACTTCATTCCTTTACCGATTATCAAATTAATTTGCTATTCTCAAATCCTAAGATATTTAATTGGCAA GAAAACTTTCCTAAAGTCTTTGCAGAAGGTGGATTTGATTGTATAATTGGCAATCCTCCTTATATTCGGATTCAAAATTT ACAACCAAAAGAACGTCGAAATCACTACATTGAAAGATATCAAACGGCTCGTGGACACTTTGATATAGCCGGATTATTTA TTGAATTGGGGCATTATTTACTCAAGCCACAAGGTCAATTAAGTTATATTATCTCTAATAAGCTGTTAACAACTCAAGGA GCAAAAGCATTAAGAACTTATATTTTCAAACATTATAGTCTGATTGAAATTATCGATCTTGGGGATACTAAATTATTTGA AGCTGCAATTTTACCTACGATATTAATTTTGGAAAAACAAATTCCTGCTTCAGATTATTTTCTTTACACCTCCATTCAAC AAATGAGAAAACCAGCCACTAACTATCTAAAAGTTGAGAATTTATTCGAGTTATTAAACCAACAACCTCATTGTGAATTT ATCCAGTGGCAACAACGCTACTTTCAGGTTAAACAATTCAAAACCGCTTTACCAAAAATAAATCAATCTATATGGACATT TCATACTACTAGAGAACAAAAACTTATTGAAAAACTGAAACAAAATACATTTTGCACCTTAGCTGATATTAGTCACAAAA TCAGTGTAGGAATTAAAACAACGGCTGATAATGTTTTTATCAAACCTATGACCTTTGATTTTATTAATAATCTCCATTTA GAGTCAACAGTAATTTTTCCACTTTTGGAAAGCCATAATGTTTGTAAATAG
Upstream 100 bases:
>100_bases CTAAAAAGCAATTAAAACCACTACCAATTGAAATATTAAATCAAAAAATATTAATGGCCTAGTTCATAATAAATATTTGT GTATAACATAATTTTTACCG
Downstream 100 bases:
>100_bases TATTGTGACTGGCAGGAAAAAAGCGATCTCTATGTTTTATATCCTTACAAATATCAAAACAATAAACTTTTACCCATTAA CTTAAATTTATATCCAAATA
Product: Type I restriction-modification system methyltransferase subunit-like protein
Products: NA
Alternate protein names: M.BanIII; Adenine-specific methyltransferase BanIII [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MKIESSAWNHQTQYSAQQRKLLGVHYTPDNLIDYIVSHTLFSYLDKNKFTPLDKIKILDPACGSGLFLLKAFDLLCSLWQ KQFGQLKPQDIRHILENNLYGVDIENNAVHEAKKQLKNKANLLGVKEVNIPIFQGDALLHSFTDYQINLLFSNPKIFNWQ ENFPKVFAEGGFDCIIGNPPYIRIQNLQPKERRNHYIERYQTARGHFDIAGLFIELGHYLLKPQGQLSYIISNKLLTTQG AKALRTYIFKHYSLIEIIDLGDTKLFEAAILPTILILEKQIPASDYFLYTSIQQMRKPATNYLKVENLFELLNQQPHCEF IQWQQRYFQVKQFKTALPKINQSIWTFHTTREQKLIEKLKQNTFCTLADISHKISVGIKTTADNVFIKPMTFDFINNLHL ESTVIFPLLESHNVCK
Sequences:
>Translated_416_residues MKIESSAWNHQTQYSAQQRKLLGVHYTPDNLIDYIVSHTLFSYLDKNKFTPLDKIKILDPACGSGLFLLKAFDLLCSLWQ KQFGQLKPQDIRHILENNLYGVDIENNAVHEAKKQLKNKANLLGVKEVNIPIFQGDALLHSFTDYQINLLFSNPKIFNWQ ENFPKVFAEGGFDCIIGNPPYIRIQNLQPKERRNHYIERYQTARGHFDIAGLFIELGHYLLKPQGQLSYIISNKLLTTQG AKALRTYIFKHYSLIEIIDLGDTKLFEAAILPTILILEKQIPASDYFLYTSIQQMRKPATNYLKVENLFELLNQQPHCEF IQWQQRYFQVKQFKTALPKINQSIWTFHTTREQKLIEKLKQNTFCTLADISHKISVGIKTTADNVFIKPMTFDFINNLHL ESTVIFPLLESHNVCK >Mature_416_residues MKIESSAWNHQTQYSAQQRKLLGVHYTPDNLIDYIVSHTLFSYLDKNKFTPLDKIKILDPACGSGLFLLKAFDLLCSLWQ KQFGQLKPQDIRHILENNLYGVDIENNAVHEAKKQLKNKANLLGVKEVNIPIFQGDALLHSFTDYQINLLFSNPKIFNWQ ENFPKVFAEGGFDCIIGNPPYIRIQNLQPKERRNHYIERYQTARGHFDIAGLFIELGHYLLKPQGQLSYIISNKLLTTQG AKALRTYIFKHYSLIEIIDLGDTKLFEAAILPTILILEKQIPASDYFLYTSIQQMRKPATNYLKVENLFELLNQQPHCEF IQWQQRYFQVKQFKTALPKINQSIWTFHTTREQKLIEKLKQNTFCTLADISHKISVGIKTTADNVFIKPMTFDFINNLHL ESTVIFPLLESHNVCK
Specific function: This methylase recognizes the double-stranded sequence ATCGAT, causes specific methylation on A-5 on both strands, and protects the DNA from cleavage by the BanIII endonuclease [H]
COG id: COG1002
COG function: function code V; Type II restriction enzyme, methylase subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 [H]
Pfam domain/function: PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 48384; Mature: 48384
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIESSAWNHQTQYSAQQRKLLGVHYTPDNLIDYIVSHTLFSYLDKNKFTPLDKIKILDP CCCCCCCCCCHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEECC ACGSGLFLLKAFDLLCSLWQKQFGQLKPQDIRHILENNLYGVDIENNAVHEAKKQLKNKA CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHH NLLGVKEVNIPIFQGDALLHSFTDYQINLLFSNPKIFNWQENFPKVFAEGGFDCIIGNPP HEEEEEECCCEEEECCHHHHCCCCEEEEEEECCCEEECCHHHHHHHHHCCCCEEEECCCC YIRIQNLQPKERRNHYIERYQTARGHFDIAGLFIELGHYLLKPQGQLSYIISNKLLTTQG EEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCC AKALRTYIFKHYSLIEIIDLGDTKLFEAAILPTILILEKQIPASDYFLYTSIQQMRKPAT HHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCHH NYLKVENLFELLNQQPHCEFIQWQQRYFQVKQFKTALPKINQSIWTFHTTREQKLIEKLK HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH QNTFCTLADISHKISVGIKTTADNVFIKPMTFDFINNLHLESTVIFPLLESHNVCK CCCCEEEECCCCEEEEEEEECCCCEEEEEEEHHHHCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MKIESSAWNHQTQYSAQQRKLLGVHYTPDNLIDYIVSHTLFSYLDKNKFTPLDKIKILDP CCCCCCCCCCHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEECC ACGSGLFLLKAFDLLCSLWQKQFGQLKPQDIRHILENNLYGVDIENNAVHEAKKQLKNKA CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHH NLLGVKEVNIPIFQGDALLHSFTDYQINLLFSNPKIFNWQENFPKVFAEGGFDCIIGNPP HEEEEEECCCEEEECCHHHHCCCCEEEEEEECCCEEECCHHHHHHHHHCCCCEEEECCCC YIRIQNLQPKERRNHYIERYQTARGHFDIAGLFIELGHYLLKPQGQLSYIISNKLLTTQG EEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCC AKALRTYIFKHYSLIEIIDLGDTKLFEAAILPTILILEKQIPASDYFLYTSIQQMRKPAT HHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCHH NYLKVENLFELLNQQPHCEFIQWQQRYFQVKQFKTALPKINQSIWTFHTTREQKLIEKLK HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH QNTFCTLADISHKISVGIKTTADNVFIKPMTFDFINNLHLESTVIFPLLESHNVCK CCCCEEEECCCCEEEEEEEECCCCEEEEEEEHHHHCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368640 [H]