Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is ycbX [C]

Identifier: 113477964

GI number: 113477964

Start: 7040951

End: 7041754

Strand: Reverse

Name: ycbX [C]

Synonym: Tery_4576

Alternate gene names: 113477964

Gene position: 7041754-7040951 (Counterclockwise)

Preceding gene: 113477967

Following gene: 113477963

Centisome position: 90.86

GC content: 41.29

Gene sequence:

>804_bases
ATGAAAATAGCAACAGTCAAACAGTTATTTATTCATCCAGTTAAGGGGTTAACTCCTCAAGTTTGTCAGCATCTTTCCCT
AACTGCAGGTCATGGCATTCAAGGCGATCGCGCATTTGCTCTGATGTTTCTGGACTCTGAGAAACCCAAGCAACCTAAAG
TTGTACCTTGGATGAGTAAAAAGCATTTTGCTGTGCAGAATGACTGGCCTGGTTTAGCGGCTTTAGATTGTAATTTTGAT
GAGGAAACAGAATTTTTAACTGTGGGACGGCAAGGGGTTGAGTTGGTCAGGGAAAATACAAGTTTATCTGAAGGGCGCGA
TCGCCTTAGTGGTTTTTTTACAAATTATTTGACTACTCTAGAACCCAATAAAGGAGGGCGTCATCCTCAAAAAGCACCTC
TGCAGTTAGTGGGAAATGGGAAAACCAGTCGTTATCCTGACCGGGAACCCGTACATATTTCTATTATTAGTCAAGCAACA
ATGGATGATTTGGGAGAAAAGACTGGTCAAATATTAGACGTGCGGAGGTTTCGCCCTAATATAGTTGTGACAGGAATAGA
TGCTTGGTCAGAATTTGATTTGGTGGGGAAACAGTTATCTTTGGGTGATGCTCAAATTACTGTTACTGCTAAAATTGGGC
GGTGTATGAATATTGAGGTTGACCCAGAAACAGGCGATCGAGATGTTCCATTATTGTCGGTGTTGAAAGAAAAATATGGT
CACTCTTACACAGGAGTATTAGCAACTGTTGAGAGTGATGGAGTGGTAGCAGTGGGAAATATTTTACAGGTTTTGAATGA
TTGA

Upstream 100 bases:

>100_bases
TATTGCTCTAGTAAGTTAAAAATCTATCTTTTTTGTTACTGGAACAATACTAAAAATAAAAACTTTTTTATGAGTTATTA
AACCAATACTATATAATAAC

Downstream 100 bases:

>100_bases
ATAATTAAAACATTCAATTATTCAATTATTATGGTTCAATTTTTTTTAGTTACCTATCATGATAGCGGTTTTGAGATTGA
TAAATTATGTAGTCAAAACC

Product: MOSC domain-containing protein

Products: NA

Alternate protein names: MOSC Domain Containing Protein; Mosc Domain Protein; MOSC Domain Protein; Transcriptional Regulator; Mosc Domain; Xylene Monooxygenase Electron Transfer Component; Mosc Domain Containing Protein

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKIATVKQLFIHPVKGLTPQVCQHLSLTAGHGIQGDRAFALMFLDSEKPKQPKVVPWMSKKHFAVQNDWPGLAALDCNFD
EETEFLTVGRQGVELVRENTSLSEGRDRLSGFFTNYLTTLEPNKGGRHPQKAPLQLVGNGKTSRYPDREPVHISIISQAT
MDDLGEKTGQILDVRRFRPNIVVTGIDAWSEFDLVGKQLSLGDAQITVTAKIGRCMNIEVDPETGDRDVPLLSVLKEKYG
HSYTGVLATVESDGVVAVGNILQVLND

Sequences:

>Translated_267_residues
MKIATVKQLFIHPVKGLTPQVCQHLSLTAGHGIQGDRAFALMFLDSEKPKQPKVVPWMSKKHFAVQNDWPGLAALDCNFD
EETEFLTVGRQGVELVRENTSLSEGRDRLSGFFTNYLTTLEPNKGGRHPQKAPLQLVGNGKTSRYPDREPVHISIISQAT
MDDLGEKTGQILDVRRFRPNIVVTGIDAWSEFDLVGKQLSLGDAQITVTAKIGRCMNIEVDPETGDRDVPLLSVLKEKYG
HSYTGVLATVESDGVVAVGNILQVLND
>Mature_267_residues
MKIATVKQLFIHPVKGLTPQVCQHLSLTAGHGIQGDRAFALMFLDSEKPKQPKVVPWMSKKHFAVQNDWPGLAALDCNFD
EETEFLTVGRQGVELVRENTSLSEGRDRLSGFFTNYLTTLEPNKGGRHPQKAPLQLVGNGKTSRYPDREPVHISIISQAT
MDDLGEKTGQILDVRRFRPNIVVTGIDAWSEFDLVGKQLSLGDAQITVTAKIGRCMNIEVDPETGDRDVPLLSVLKEKYG
HSYTGVLATVESDGVVAVGNILQVLND

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29419; Mature: 29419

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIATVKQLFIHPVKGLTPQVCQHLSLTAGHGIQGDRAFALMFLDSEKPKQPKVVPWMSK
CCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
KHFAVQNDWPGLAALDCNFDEETEFLTVGRQGVELVRENTSLSEGRDRLSGFFTNYLTTL
CCEEEECCCCCEEEEECCCCCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEE
EPNKGGRHPQKAPLQLVGNGKTSRYPDREPVHISIISQATMDDLGEKTGQILDVRRFRPN
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCEEEHEECCCC
IVVTGIDAWSEFDLVGKQLSLGDAQITVTAKIGRCMNIEVDPETGDRDVPLLSVLKEKYG
EEEEECCCCCHHHHHCCEECCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHC
HSYTGVLATVESDGVVAVGNILQVLND
CCEEEEEEEECCCCEEEHHHHHHHHCC
>Mature Secondary Structure
MKIATVKQLFIHPVKGLTPQVCQHLSLTAGHGIQGDRAFALMFLDSEKPKQPKVVPWMSK
CCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
KHFAVQNDWPGLAALDCNFDEETEFLTVGRQGVELVRENTSLSEGRDRLSGFFTNYLTTL
CCEEEECCCCCEEEEECCCCCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEE
EPNKGGRHPQKAPLQLVGNGKTSRYPDREPVHISIISQATMDDLGEKTGQILDVRRFRPN
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCEEEHEECCCC
IVVTGIDAWSEFDLVGKQLSLGDAQITVTAKIGRCMNIEVDPETGDRDVPLLSVLKEKYG
EEEEECCCCCHHHHHCCEECCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHC
HSYTGVLATVESDGVVAVGNILQVLND
CCEEEEEEEECCCCEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA