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The map label for this gene is codA [H]

Identifier: 113477958

GI number: 113477958

Start: 7030421

End: 7031815

Strand: Reverse

Name: codA [H]

Synonym: Tery_4570

Alternate gene names: 113477958

Gene position: 7031815-7030421 (Counterclockwise)

Preceding gene: 113477961

Following gene: 113477957

Centisome position: 90.73

GC content: 35.99

Gene sequence:

>1395_bases
ATGGGCCGTCAAAAGTTAATATTAAAAGGTCAAAAGTCAAAATTCTCTATATATTTTATGAACCATCAACAATTTTCAGT
CATGCCTGAGACTTCTAACTATTGGCTAAAAAATGCTCATGTACCTGCATGTCTCATAGAAAGAGAATTAGAGATATCAG
ATCAAACAAGAGTTGGTTTGTCTTTAGTAGATATAGAAATTAAAGAGGGAGTCATAACACAAATTGTCCACTCGTTAGCC
GACTTGCCTTCTCTGAACAATGGGGACATTCCTAGAGTTGACCTCAAAGGTGGTATGGTGTGGCCATGTTTTGTAGATAT
GCATACCCATTTAGATAAAGGCCATATTTGGGAGCGATCGCCTAACCCAGATGGTAGTTTTAATGGCGCTTTAGATGCAG
GTGCTAGGGATGGGGAAAAATATTGGAATGCTGAAGACATTTACCGTCGAATGGAATTTGGCCTGAAATGCAGTTATGCT
CATGGCACAAAAGCTATTCGGACTCATCTTGACTGTTTTGCACAACAGGCAAATATTAGTTTGGAAGTATTTCAAACATT
ACAAAAAAAGTGGGAAAGTAGATTAATATTACAACCTGTTTCTTTGGTTACTGGAGATTATTATCTTACTGAAGCTGGAG
AAAAATTAGCCGATCAAATTGCTGATATTGGTGGGATATTAGGAGGGGTTCCATTTATAAATTCAGACTTAGATAACCAA
TTAGATAGATTATTTAGTATAGCCAAAGAACGTCAATTAGATTTAGACTTACATACTGATGAAAATGGAGACCCTAATTC
CCGGGTTTTACACAAAGTTGCTGAGAAAGCAATTAGTCATCAATTTTATGGCAAAATTATCTGCGGACATTGTTGTAGTT
TAGCTGTACAAACCCCTGAAAAAGTAACAGAAACTATTAAGTTAGTTAAGGAAGCTGGTATTAGTATTGTTAGTCTGCCA
ATGTGTAATCTTTATCTCCAAAATCGCCAAGAAAATTATACTCCTAGATGGCGGGGTGTGACTTTATTACATGAATTAAA
AAAACAGGGAATTTCAGTTGCTATTGCCAGTGATAATTGTCGCGACCCGTTTTTTGGATTTGGTGACCATGATGTTTTAG
AAGTCTTTAATATGTCAGTGAGAATTGCTCATTTAGATATGCCTTATGGGGATTGGCCTTGTGCTGTTACTAAGACTCCT
GGAGATTTAATTGGTTTGCCAAATGTGGGAATAATTAAAGTTGGATTACCCGCAGATTTAATTCTATTTAAAGGTCGGAA
TTTTAGTGAACTTTTATCACGGTCTCAGCATGATAGAGTAGTATTAAGAAATGGTCTAGTTATTGATACAACTTTACCTG
ATTATTCTGAATTAGATAGCTTGTTTTACGGATAG

Upstream 100 bases:

>100_bases
ATTTTTTAATGCAGATTGTAATCTAGATTCAGTTATCATTGAACTTAATCCTTTAACCGATAATTTTCTCTACATTATTG
TGCCACGTAGATATAGCCCT

Downstream 100 bases:

>100_bases
TAATTTATTAACTATTTTTTAGGTAATAAGTCAAAATTAAAAAGTAAGAACTAAGGGCTAAAAAGTAAAAAGTAAAAACT
AAGAACTAAAAAGCAAAAAG

Product: cytosine deaminase-like protein

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MGRQKLILKGQKSKFSIYFMNHQQFSVMPETSNYWLKNAHVPACLIERELEISDQTRVGLSLVDIEIKEGVITQIVHSLA
DLPSLNNGDIPRVDLKGGMVWPCFVDMHTHLDKGHIWERSPNPDGSFNGALDAGARDGEKYWNAEDIYRRMEFGLKCSYA
HGTKAIRTHLDCFAQQANISLEVFQTLQKKWESRLILQPVSLVTGDYYLTEAGEKLADQIADIGGILGGVPFINSDLDNQ
LDRLFSIAKERQLDLDLHTDENGDPNSRVLHKVAEKAISHQFYGKIICGHCCSLAVQTPEKVTETIKLVKEAGISIVSLP
MCNLYLQNRQENYTPRWRGVTLLHELKKQGISVAIASDNCRDPFFGFGDHDVLEVFNMSVRIAHLDMPYGDWPCAVTKTP
GDLIGLPNVGIIKVGLPADLILFKGRNFSELLSRSQHDRVVLRNGLVIDTTLPDYSELDSLFYG

Sequences:

>Translated_464_residues
MGRQKLILKGQKSKFSIYFMNHQQFSVMPETSNYWLKNAHVPACLIERELEISDQTRVGLSLVDIEIKEGVITQIVHSLA
DLPSLNNGDIPRVDLKGGMVWPCFVDMHTHLDKGHIWERSPNPDGSFNGALDAGARDGEKYWNAEDIYRRMEFGLKCSYA
HGTKAIRTHLDCFAQQANISLEVFQTLQKKWESRLILQPVSLVTGDYYLTEAGEKLADQIADIGGILGGVPFINSDLDNQ
LDRLFSIAKERQLDLDLHTDENGDPNSRVLHKVAEKAISHQFYGKIICGHCCSLAVQTPEKVTETIKLVKEAGISIVSLP
MCNLYLQNRQENYTPRWRGVTLLHELKKQGISVAIASDNCRDPFFGFGDHDVLEVFNMSVRIAHLDMPYGDWPCAVTKTP
GDLIGLPNVGIIKVGLPADLILFKGRNFSELLSRSQHDRVVLRNGLVIDTTLPDYSELDSLFYG
>Mature_463_residues
GRQKLILKGQKSKFSIYFMNHQQFSVMPETSNYWLKNAHVPACLIERELEISDQTRVGLSLVDIEIKEGVITQIVHSLAD
LPSLNNGDIPRVDLKGGMVWPCFVDMHTHLDKGHIWERSPNPDGSFNGALDAGARDGEKYWNAEDIYRRMEFGLKCSYAH
GTKAIRTHLDCFAQQANISLEVFQTLQKKWESRLILQPVSLVTGDYYLTEAGEKLADQIADIGGILGGVPFINSDLDNQL
DRLFSIAKERQLDLDLHTDENGDPNSRVLHKVAEKAISHQFYGKIICGHCCSLAVQTPEKVTETIKLVKEAGISIVSLPM
CNLYLQNRQENYTPRWRGVTLLHELKKQGISVAIASDNCRDPFFGFGDHDVLEVFNMSVRIAHLDMPYGDWPCAVTKTPG
DLIGLPNVGIIKVGLPADLILFKGRNFSELLSRSQHDRVVLRNGLVIDTTLPDYSELDSLFYG

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=402, Percent_Identity=26.1194029850746, Blast_Score=126, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 52108; Mature: 51977

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRQKLILKGQKSKFSIYFMNHQQFSVMPETSNYWLKNAHVPACLIERELEISDQTRVGL
CCCCCEEEECCCCEEEEEEEECCEEEEECCCCCCEEECCCCCCEEHHHHCCCCCCCCCCE
SLVDIEIKEGVITQIVHSLADLPSLNNGDIPRVDLKGGMVWPCFVDMHTHLDKGHIWERS
EEEEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEEEHHHCCCCCCCCCCC
PNPDGSFNGALDAGARDGEKYWNAEDIYRRMEFGLKCSYAHGTKAIRTHLDCFAQQANIS
CCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCH
LEVFQTLQKKWESRLILQPVSLVTGDYYLTEAGEKLADQIADIGGILGGVPFINSDLDNQ
HHHHHHHHHHHHCCEEECCHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LDRLFSIAKERQLDLDLHTDENGDPNSRVLHKVAEKAISHQFYGKIICGHCCSLAVQTPE
HHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KVTETIKLVKEAGISIVSLPMCNLYLQNRQENYTPRWRGVTLLHELKKQGISVAIASDNC
HHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCC
RDPFFGFGDHDVLEVFNMSVRIAHLDMPYGDWPCAVTKTPGDLIGLPNVGIIKVGLPADL
CCCCCCCCCHHHHHHHCCEEEEEEEECCCCCCCEEEECCCCCEECCCCCCEEEECCCCEE
ILFKGRNFSELLSRSQHDRVVLRNGLVIDTTLPDYSELDSLFYG
EEECCCCHHHHHCCCCCCEEEEECCEEEECCCCCHHHHHHHHCC
>Mature Secondary Structure 
GRQKLILKGQKSKFSIYFMNHQQFSVMPETSNYWLKNAHVPACLIERELEISDQTRVGL
CCCCEEEECCCCEEEEEEEECCEEEEECCCCCCEEECCCCCCEEHHHHCCCCCCCCCCE
SLVDIEIKEGVITQIVHSLADLPSLNNGDIPRVDLKGGMVWPCFVDMHTHLDKGHIWERS
EEEEEEECCCHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEEEEHHHCCCCCCCCCCC
PNPDGSFNGALDAGARDGEKYWNAEDIYRRMEFGLKCSYAHGTKAIRTHLDCFAQQANIS
CCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCCCH
LEVFQTLQKKWESRLILQPVSLVTGDYYLTEAGEKLADQIADIGGILGGVPFINSDLDNQ
HHHHHHHHHHHHCCEEECCHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LDRLFSIAKERQLDLDLHTDENGDPNSRVLHKVAEKAISHQFYGKIICGHCCSLAVQTPE
HHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KVTETIKLVKEAGISIVSLPMCNLYLQNRQENYTPRWRGVTLLHELKKQGISVAIASDNC
HHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCC
RDPFFGFGDHDVLEVFNMSVRIAHLDMPYGDWPCAVTKTPGDLIGLPNVGIIKVGLPADL
CCCCCCCCCHHHHHHHCCEEEEEEEECCCCCCCEEEECCCCCEECCCCCCEEEECCCCEE
ILFKGRNFSELLSRSQHDRVVLRNGLVIDTTLPDYSELDSLFYG
EEECCCCHHHHHCCCCCCEEEEECCEEEECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]