| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113477950
Identifier: 113477950
GI number: 113477950
Start: 7021784
End: 7021990
Strand: Reverse
Name: 113477950
Synonym: Tery_4562
Alternate gene names: NA
Gene position: 7021990-7021784 (Counterclockwise)
Preceding gene: 113477951
Following gene: 113477949
Centisome position: 90.61
GC content: 41.55
Gene sequence:
>207_bases GTGGCGATCGAATTGATGGCAACACTTTCGACTTTATTTAGCTTGGCAGGACGTCAAACTGAGGGCTTTTTAGAATCTAT ATTTTCTCTAATGGGACTAGAGTTACCAGTCCCAGACCACAGTACTTTTTCTCGTCGCTTGGGTAAATTGAACATAGAAA TACCAGTAATTCCAGCAACAGAAGCAATTCACCTGGTGGTAGATTGA
Upstream 100 bases:
>100_bases ACGAGGCAGTCTGACATTTTGGCTATATCAAGAGGTAATAGACCAATGGCTTAACCAAAAGAAAACAGGACGCAAGGGAG CATCAAATACTTACAGTAAT
Downstream 100 bases:
>100_bases CGGGAGTCAAAGTTTATGGAGAAGGAGAGTGGAAAACAAGAATTCATGGAGTAGGTAAACGTCGTACATGGGGCTTTGTT GCATCTAGGTGTGAATGAGG
Product: putative transposase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MAIELMATLSTLFSLAGRQTEGFLESIFSLMGLELPVPDHSTFSRRLGKLNIEIPVIPATEAIHLVVD
Sequences:
>Translated_68_residues MAIELMATLSTLFSLAGRQTEGFLESIFSLMGLELPVPDHSTFSRRLGKLNIEIPVIPATEAIHLVVD >Mature_67_residues AIELMATLSTLFSLAGRQTEGFLESIFSLMGLELPVPDHSTFSRRLGKLNIEIPVIPATEAIHLVVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7439; Mature: 7308
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIELMATLSTLFSLAGRQTEGFLESIFSLMGLELPVPDHSTFSRRLGKLNIEIPVIPAT CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEECCC EAIHLVVD CEEEEEEC >Mature Secondary Structure AIELMATLSTLFSLAGRQTEGFLESIFSLMGLELPVPDHSTFSRRLGKLNIEIPVIPAT CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEEECCC EAIHLVVD CEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA