The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477943

Identifier: 113477943

GI number: 113477943

Start: 7017385

End: 7018134

Strand: Reverse

Name: 113477943

Synonym: Tery_4555

Alternate gene names: NA

Gene position: 7018134-7017385 (Counterclockwise)

Preceding gene: 113477944

Following gene: 113477942

Centisome position: 90.56

GC content: 30.53

Gene sequence:

>750_bases
ATGAAAGAAACAACTTCAGTGGCCATGCCCTCTTGTTTCCATCGATGGTGCGATCGCTTTAACAATGTCTTTAAAACAAA
AGCCCAAAAAACAGGGTTTAGGGAATATATAGGAGGATTACTCTTGAGAAAGCGATCGAAAAAACTTGTCTCAAATTGCC
AACAACACTGTAGGTCACACGTACCACAAATTACGGCATTTTCTAGTTCGAGCAAATTAGACATCTCCAAAATAAAAAAT
AAGGTAAAATTATCAAAACCATTTATTTATAAAGTCTCCCAAATGAATCCAACTTTAGAATATATTTATAACCATCCAAA
AGAAACAAAAAGAATTATTGGCATTACTTATGAACAGCTAATAAAATTAATAGCAAAGGCCCAAATAATAGAATCAGAGA
AAAAGAAGGCGATCGCTAAAACAGAAAAAAGATTAATTAAAGCAGGTGGAGTCAGAAAAAAGAATTTAACAAAGGAGGAA
GAAATAATTTTAACGTTATTTTATTTACATCAAATACCGACTTTTCAAACATTAGGAATTAACTTTGGTATAAGTGAATC
AAGTGCTAATAATATTTTTCATTACTGGATAGATATTCTCAGAGAATTACTGCCAGCAAGTTTATTAGAACAAGTAAAAA
AAAAAGAAAATGAATTGGAATGGGTAAAGGAGATATTAACAGAATTAGAATTAATTGTAGATAGTACAGAACAAAGTAGA
GAAAGACCAAGTGAATATAAAGACCAATAA

Upstream 100 bases:

>100_bases
CTTTAAGGTAGCGGGACTTTAGTGAAAAAATAGTAAAAAAAAGGGTATAATGTATACCTGATATGTATTTTACGTTAATT
ACTGGCCTGGGAAAAGTTTG

Downstream 100 bases:

>100_bases
AAATATAAAATATGAAAAAATAAAAATCATACTTTTAAAAATCAAATAATAACGACACCAAAAGGAACAGAAATAGTAGA
TGTAATAGTAGGAGAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKETTSVAMPSCFHRWCDRFNNVFKTKAQKTGFREYIGGLLLRKRSKKLVSNCQQHCRSHVPQITAFSSSSKLDISKIKN
KVKLSKPFIYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKKNLTKEE
EIILTLFYLHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKENELEWVKEILTELELIVDSTEQSR
ERPSEYKDQ

Sequences:

>Translated_249_residues
MKETTSVAMPSCFHRWCDRFNNVFKTKAQKTGFREYIGGLLLRKRSKKLVSNCQQHCRSHVPQITAFSSSSKLDISKIKN
KVKLSKPFIYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKKNLTKEE
EIILTLFYLHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKENELEWVKEILTELELIVDSTEQSR
ERPSEYKDQ
>Mature_249_residues
MKETTSVAMPSCFHRWCDRFNNVFKTKAQKTGFREYIGGLLLRKRSKKLVSNCQQHCRSHVPQITAFSSSSKLDISKIKN
KVKLSKPFIYKVSQMNPTLEYIYNHPKETKRIIGITYEQLIKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKKNLTKEE
EIILTLFYLHQIPTFQTLGINFGISESSANNIFHYWIDILRELLPASLLEQVKKKENELEWVKEILTELELIVDSTEQSR
ERPSEYKDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29035; Mature: 29035

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETTSVAMPSCFHRWCDRFNNVFKTKAQKTGFREYIGGLLLRKRSKKLVSNCQQHCRSH
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPQITAFSSSSKLDISKIKNKVKLSKPFIYKVSQMNPTLEYIYNHPKETKRIIGITYEQL
CCCEEECCCCCCCHHHHHHHHHHCCCCHHEEHHHCCHHHHHHHCCCHHHHHHHCCCHHHH
IKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFYLHQIPTFQTLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHEECC
NFGISESSANNIFHYWIDILRELLPASLLEQVKKKENELEWVKEILTELELIVDSTEQSR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ERPSEYKDQ
CCCCCCCCC
>Mature Secondary Structure
MKETTSVAMPSCFHRWCDRFNNVFKTKAQKTGFREYIGGLLLRKRSKKLVSNCQQHCRSH
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPQITAFSSSSKLDISKIKNKVKLSKPFIYKVSQMNPTLEYIYNHPKETKRIIGITYEQL
CCCEEECCCCCCCHHHHHHHHHHCCCCHHEEHHHCCHHHHHHHCCCHHHHHHHCCCHHHH
IKLIAKAQIIESEKKKAIAKTEKRLIKAGGVRKKNLTKEEEIILTLFYLHQIPTFQTLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHEECC
NFGISESSANNIFHYWIDILRELLPASLLEQVKKKENELEWVKEILTELELIVDSTEQSR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ERPSEYKDQ
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA