The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113477909

Identifier: 113477909

GI number: 113477909

Start: 6964049

End: 6964318

Strand: Reverse

Name: 113477909

Synonym: Tery_4512

Alternate gene names: NA

Gene position: 6964318-6964049 (Counterclockwise)

Preceding gene: 113477910

Following gene: 113477906

Centisome position: 89.86

GC content: 37.41

Gene sequence:

>270_bases
ATGGCTTTCTACAAAGGAAATCAGCTACTTGCATATTGGAAAGCTACAGATTTTGCTGGTTATGGTGAAAGTCGATACGT
TAATTTCTTTGCTGAGGAAAATGAGTCTTTTGACCGAATAATTCTATCTTCTTCTAATCCTGCTTTGGAAACAGAGAATC
ATGCTTACAGACTTGTTTCTGAGCCTAATACCTCAGTTCCCGAAGCAACTTCTGCAATAGGTTTATTGATATTTGGTGCT
GTTGCTTATCGTTTGAGGAAAGCCAAATAA

Upstream 100 bases:

>100_bases
TTTGGTAATGCTTTAGGAAATAATCCAGTTACAATTAGCTCTCAGGAACAACTAGATTATTTTGGTATGTACTGGGGGTC
TAGCAGACTATGATAATAGG

Downstream 100 bases:

>100_bases
ATCATCAGGACTTACCCAGGTAAACTACTAAAGGCTGGTATATTGGGGTGTTGGGTAACTTTGATTTTGGTTCCTATTTT
CATCCTCTAACCACTAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MAFYKGNQLLAYWKATDFAGYGESRYVNFFAEENESFDRIILSSSNPALETENHAYRLVSEPNTSVPEATSAIGLLIFGA
VAYRLRKAK

Sequences:

>Translated_89_residues
MAFYKGNQLLAYWKATDFAGYGESRYVNFFAEENESFDRIILSSSNPALETENHAYRLVSEPNTSVPEATSAIGLLIFGA
VAYRLRKAK
>Mature_88_residues
AFYKGNQLLAYWKATDFAGYGESRYVNFFAEENESFDRIILSSSNPALETENHAYRLVSEPNTSVPEATSAIGLLIFGAV
AYRLRKAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9989; Mature: 9858

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFYKGNQLLAYWKATDFAGYGESRYVNFFAEENESFDRIILSSSNPALETENHAYRLVS
CCEECCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEC
EPNTSVPEATSAIGLLIFGAVAYRLRKAK
CCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFYKGNQLLAYWKATDFAGYGESRYVNFFAEENESFDRIILSSSNPALETENHAYRLVS
CEECCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEC
EPNTSVPEATSAIGLLIFGAVAYRLRKAK
CCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA