| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477789
Identifier: 113477789
GI number: 113477789
Start: 6759682
End: 6760485
Strand: Reverse
Name: 113477789
Synonym: Tery_4388
Alternate gene names: NA
Gene position: 6760485-6759682 (Counterclockwise)
Preceding gene: 113477791
Following gene: 113477788
Centisome position: 87.23
GC content: 33.96
Gene sequence:
>804_bases GTGAAAAAAAATTTCACGGATGCCGATACAGAAAATTATTATAATACAGTAGAAATTAAATACCAAGTTCCTTGGAACCC AGATGGTAGTAAGCATTGGGGATACTTTGATAATTTAGACGCTCCCGATCACGAAGAAGAATTATTTCAAGCTAGCGATC GCTGGAACGAATATATGTTAAATCAAAGTAAAATATGTTGTAAATCTCGCGTTCTTGACGTTGGTTGTGGAAATGGTAAC ACGGCTATTTATTTAGGGAATGAAACTAACTGCGAAGTTGTAGGAATAGATATTAGCCAAACTCATGTGAATAATGCTCA AAAGAAAGCGGCAGGCTTTCCCGATCTTAACCTTTCTTTTAAGAAAGCATCAGCAACAAATTTAGTTTTTTCAGATGGCT ATTTTACTCATGTTTGGAGTCAAGGAACTCTTTTACATATTCACGAACGAGAACTCACTTTAAGAGAATTTTATCGCCTT TTAAATAAAAGTGGAATTTTAATATTTGATGACTTAGTAACCCTAGTTTCCCAAGTCACTGATTCTACTTTAAAATATGT CTATGAGAGGATGCAAATCAGTCAGTTATTTTCTCCTAACGATTATAAAAATTATCTGGAAAAAGCAGGCTTTACAATAT TAGATTCTTTAGATTTATCCCCCCATATGAAAAAGTTTTATGGTATTCAAGCAAAGCGATTTCAAAAGGAGTTTCCAGAG CGAAGTATTGCTTATGAAAAAACTAGGGATGCTGTCAACAATGAGGAGATTGGATGGTGGTTTTATCTTTGTCAAAAGAG TTAA
Upstream 100 bases:
>100_bases TAAAACTTGAGAATTTTCAAATAACTAACCCCTCTAAAACTGCTCTAATATCCAAAGTTCTAGTAGTTACAAAATTTTAA GAAATCAAAGGAGATCAAAG
Downstream 100 bases:
>100_bases TCGAGCTATATCAATGTATAGAGCAGTTTGTCAAGTTATGAGCTAGATATACTAATTCTCATAATTTATAAAAGAAAACT GTAGGGGTTGGAGATAAAAC
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; Glycine-Sarcosine Methyltransferase; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; D-Glucose O-Methyltransferase; Glycine/Sarcosine N-Methyltransferase; Staurosporine Biosynthesis Methyltransferase StaMB; NDP-Hexose 3-O-Methyltransferase; Sarcosine/Dimethylglycine N-Methyltransferase; Glycine Sarcosine N-Methyltransferase; C5-O-Methyltransferase; Staurosporine Biosynthesis Methyltransferase StaMA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKKNFTDADTENYYNTVEIKYQVPWNPDGSKHWGYFDNLDAPDHEEELFQASDRWNEYMLNQSKICCKSRVLDVGCGNGN TAIYLGNETNCEVVGIDISQTHVNNAQKKAAGFPDLNLSFKKASATNLVFSDGYFTHVWSQGTLLHIHERELTLREFYRL LNKSGILIFDDLVTLVSQVTDSTLKYVYERMQISQLFSPNDYKNYLEKAGFTILDSLDLSPHMKKFYGIQAKRFQKEFPE RSIAYEKTRDAVNNEEIGWWFYLCQKS
Sequences:
>Translated_267_residues MKKNFTDADTENYYNTVEIKYQVPWNPDGSKHWGYFDNLDAPDHEEELFQASDRWNEYMLNQSKICCKSRVLDVGCGNGN TAIYLGNETNCEVVGIDISQTHVNNAQKKAAGFPDLNLSFKKASATNLVFSDGYFTHVWSQGTLLHIHERELTLREFYRL LNKSGILIFDDLVTLVSQVTDSTLKYVYERMQISQLFSPNDYKNYLEKAGFTILDSLDLSPHMKKFYGIQAKRFQKEFPE RSIAYEKTRDAVNNEEIGWWFYLCQKS >Mature_267_residues MKKNFTDADTENYYNTVEIKYQVPWNPDGSKHWGYFDNLDAPDHEEELFQASDRWNEYMLNQSKICCKSRVLDVGCGNGN TAIYLGNETNCEVVGIDISQTHVNNAQKKAAGFPDLNLSFKKASATNLVFSDGYFTHVWSQGTLLHIHERELTLREFYRL LNKSGILIFDDLVTLVSQVTDSTLKYVYERMQISQLFSPNDYKNYLEKAGFTILDSLDLSPHMKKFYGIQAKRFQKEFPE RSIAYEKTRDAVNNEEIGWWFYLCQKS
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31037; Mature: 31037
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNFTDADTENYYNTVEIKYQVPWNPDGSKHWGYFDNLDAPDHEEELFQASDRWNEYML CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH NQSKICCKSRVLDVGCGNGNTAIYLGNETNCEVVGIDISQTHVNNAQKKAAGFPDLNLSF CCHHHHHHHCEEEEECCCCCEEEEECCCCCCEEEEEECHHHHCCCHHHHHCCCCCCCCEE KKASATNLVFSDGYFTHVWSQGTLLHIHERELTLREFYRLLNKSGILIFDDLVTLVSQVT ECCCCCEEEEECCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHH DSTLKYVYERMQISQLFSPNDYKNYLEKAGFTILDSLDLSPHMKKFYGIQAKRFQKEFPE HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHCCHHHHHHHHCCC RSIAYEKTRDAVNNEEIGWWFYLCQKS HHHHHHHHHHCCCCCCCEEEEEEEECC >Mature Secondary Structure MKKNFTDADTENYYNTVEIKYQVPWNPDGSKHWGYFDNLDAPDHEEELFQASDRWNEYML CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH NQSKICCKSRVLDVGCGNGNTAIYLGNETNCEVVGIDISQTHVNNAQKKAAGFPDLNLSF CCHHHHHHHCEEEEECCCCCEEEEECCCCCCEEEEEECHHHHCCCHHHHHCCCCCCCCEE KKASATNLVFSDGYFTHVWSQGTLLHIHERELTLREFYRLLNKSGILIFDDLVTLVSQVT ECCCCCEEEEECCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHH DSTLKYVYERMQISQLFSPNDYKNYLEKAGFTILDSLDLSPHMKKFYGIQAKRFQKEFPE HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHCCHHHHHHHHCCC RSIAYEKTRDAVNNEEIGWWFYLCQKS HHHHHHHHHHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA