Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477780

Identifier: 113477780

GI number: 113477780

Start: 6745056

End: 6745637

Strand: Reverse

Name: 113477780

Synonym: Tery_4377

Alternate gene names: NA

Gene position: 6745637-6745056 (Counterclockwise)

Preceding gene: 113477781

Following gene: 113477779

Centisome position: 87.04

GC content: 34.02

Gene sequence:

>582_bases
ATGCCTAAAATGTTTTCATCCCCAGAATCACAAGAAAATGGACAATCTCAAGAAACCTATATCACTTTAACTGATGAGGC
AGAACGAATACTATGTTGTACTATAGAGTATTCTCTAGAGTCAGATGATGAAGAGTATGTAATGTTACTACCATTAGACT
TACCTGTTGAAATATTTACTTGGGGGCCAGAAGATGTAGAACAAGCAAGTATTCCTGTAGATAATGAATTAGAAATTGAT
AAAATTTTTGATACTGCTAAAGTTGTCCTTGAAGAACAAAACCTAGTCTTGCAAAGAACAGCAATAACGTTAACTGTTAC
TGGGGAGTTACCAGAATGGGGTGAAGATGAACTAGATGAAGTAGATGAAAATGATGAGGCCAGTGAATATTATGAAGAAT
TGGCAACTTTTTTGTATGAAGATCGGAAATACGCTATATACACACCATTAGATCCATTTTTGATTCCAGCTCGTAAAAGT
GATAATGGAAAACTGGAATTACTTTCAGAAGAAGAGTTTAAGCAAATTCAGCCAATGGTTCAAACAATGCTAGAAAATCA
ATTGTTTAATGATATGGAGTAA

Upstream 100 bases:

>100_bases
ATACACGCTTGTCTGATGCAACAGCGGAACTGGGAAGCGAGAGACCCAAACTATACCGCAAGGTTAGTATGGGGTTATAT
CACATTAACAAATAATTAAA

Downstream 100 bases:

>100_bases
AGCATTTGTAGGTTTTAGTAAATTCAGTCCTTTGGTCAAAGATTTAGCACTTAGTAATACTCTAGAATAGTCGAATCATA
ATTTTTACGACAAACTTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MPKMFSSPESQENGQSQETYITLTDEAERILCCTIEYSLESDDEEYVMLLPLDLPVEIFTWGPEDVEQASIPVDNELEID
KIFDTAKVVLEEQNLVLQRTAITLTVTGELPEWGEDELDEVDENDEASEYYEELATFLYEDRKYAIYTPLDPFLIPARKS
DNGKLELLSEEEFKQIQPMVQTMLENQLFNDME

Sequences:

>Translated_193_residues
MPKMFSSPESQENGQSQETYITLTDEAERILCCTIEYSLESDDEEYVMLLPLDLPVEIFTWGPEDVEQASIPVDNELEID
KIFDTAKVVLEEQNLVLQRTAITLTVTGELPEWGEDELDEVDENDEASEYYEELATFLYEDRKYAIYTPLDPFLIPARKS
DNGKLELLSEEEFKQIQPMVQTMLENQLFNDME
>Mature_192_residues
PKMFSSPESQENGQSQETYITLTDEAERILCCTIEYSLESDDEEYVMLLPLDLPVEIFTWGPEDVEQASIPVDNELEIDK
IFDTAKVVLEEQNLVLQRTAITLTVTGELPEWGEDELDEVDENDEASEYYEELATFLYEDRKYAIYTPLDPFLIPARKSD
NGKLELLSEEEFKQIQPMVQTMLENQLFNDME

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22370; Mature: 22239

Theoretical pI: Translated: 3.52; Mature: 3.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKMFSSPESQENGQSQETYITLTDEAERILCCTIEYSLESDDEEYVMLLPLDLPVEIFT
CCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEE
WGPEDVEQASIPVDNELEIDKIFDTAKVVLEEQNLVLQRTAITLTVTGELPEWGEDELDE
CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCHHHH
VDENDEASEYYEELATFLYEDRKYAIYTPLDPFLIPARKSDNGKLELLSEEEFKQIQPMV
CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCEEEECHHHHHHHHHHH
QTMLENQLFNDME
HHHHHHHHHCCCC
>Mature Secondary Structure 
PKMFSSPESQENGQSQETYITLTDEAERILCCTIEYSLESDDEEYVMLLPLDLPVEIFT
CCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEE
WGPEDVEQASIPVDNELEIDKIFDTAKVVLEEQNLVLQRTAITLTVTGELPEWGEDELDE
CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCHHHH
VDENDEASEYYEELATFLYEDRKYAIYTPLDPFLIPARKSDNGKLELLSEEEFKQIQPMV
CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCEEEECHHHHHHHHHHH
QTMLENQLFNDME
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA