| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is yqeG [H]
Identifier: 113477778
GI number: 113477778
Start: 6743091
End: 6743648
Strand: Reverse
Name: yqeG [H]
Synonym: Tery_4375
Alternate gene names: 113477778
Gene position: 6743648-6743091 (Counterclockwise)
Preceding gene: 113477779
Following gene: 113477776
Centisome position: 87.01
GC content: 32.8
Gene sequence:
>558_bases ATGTGTTGGGGTAAACTTTTACAACCAGATTTAGTTCTGGGTAACTCAGTCTTAAGTCTAACATTAGAAATTCTCCAAAA ATATCAAATTCAAGGTTTGGTGTTAGATGTAGATGAGACTATTGTGCCAATTCACCATAGTCAAGCTTCTCCTGAATTAG CTGTGTGGGTAGAAAAAATTAAAAGTGTAGCAAGTTTATGGTTAGTCAGTAATAATCTTAGTCAAGATAGAATAGGTCGA ATTGGTGATTTACTCAATATACCTTATATTACTGCTGCTGGGAAACCTTCTCGTCGTAAGTTAAAAAAGGCTGTTGATGC GATGAATTTACCAGTAGAAAAAGTTGCTATGGTAGGCGATCGCTTGTTTACTGATGTTTTAGCAGGAAATCGTTTAGGAA TGTTTACTATTCTTGTTGAACCTATATCTAGTAATGGTTTAGAATTTTCTAACTATAAAGTTCGTTCTTTTGAAGTATGG GTTTCTCAAATATTAGGAGTATCTTTGAATTTGACTACTCACTCTTTGATTTATGATCATAAAAATGATTTTATGTAA
Upstream 100 bases:
>100_bases ATTAGCGACTTGTTAATAAATATTTTTTTCTATTTATACTCTGCTAATTTTTTACTTTATAATTGAGCAGCTGAAAATTA TTGTTATAAATATTAATATT
Downstream 100 bases:
>100_bases CTATTCAGCTCTCAGCTATCAGCTTCATTACCTTTAGAGGTTTCAAAGAATTAAAAGTAATATAGTAGAAATGAAACCAA TGCTTACTTAATTCATTGGT
Product: HAD family phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MCWGKLLQPDLVLGNSVLSLTLEILQKYQIQGLVLDVDETIVPIHHSQASPELAVWVEKIKSVASLWLVSNNLSQDRIGR IGDLLNIPYITAAGKPSRRKLKKAVDAMNLPVEKVAMVGDRLFTDVLAGNRLGMFTILVEPISSNGLEFSNYKVRSFEVW VSQILGVSLNLTTHSLIYDHKNDFM
Sequences:
>Translated_185_residues MCWGKLLQPDLVLGNSVLSLTLEILQKYQIQGLVLDVDETIVPIHHSQASPELAVWVEKIKSVASLWLVSNNLSQDRIGR IGDLLNIPYITAAGKPSRRKLKKAVDAMNLPVEKVAMVGDRLFTDVLAGNRLGMFTILVEPISSNGLEFSNYKVRSFEVW VSQILGVSLNLTTHSLIYDHKNDFM >Mature_185_residues MCWGKLLQPDLVLGNSVLSLTLEILQKYQIQGLVLDVDETIVPIHHSQASPELAVWVEKIKSVASLWLVSNNLSQDRIGR IGDLLNIPYITAAGKPSRRKLKKAVDAMNLPVEKVAMVGDRLFTDVLAGNRLGMFTILVEPISSNGLEFSNYKVRSFEVW VSQILGVSLNLTTHSLIYDHKNDFM
Specific function: Unknown
COG id: COG2179
COG function: function code R; Predicted hydrolase of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006549 - InterPro: IPR010021 [H]
Pfam domain/function: PF09419 DUF2010 [H]
EC number: NA
Molecular weight: Translated: 20642; Mature: 20642
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCWGKLLQPDLVLGNSVLSLTLEILQKYQIQGLVLDVDETIVPIHHSQASPELAVWVEKI CCCCHHCCCCHHHCHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCCCHHHHHHHHH KSVASLWLVSNNLSQDRIGRIGDLLNIPYITAAGKPSRRKLKKAVDAMNLPVEKVAMVGD HHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHH RLFTDVLAGNRLGMFTILVEPISSNGLEFSNYKVRSFEVWVSQILGVSLNLTTHSLIYDH HHHHHHHCCCCCEEEEEEEEECCCCCEECCCEEEHHHHHHHHHHHCCEEECEEHEEEECC KNDFM CCCCC >Mature Secondary Structure MCWGKLLQPDLVLGNSVLSLTLEILQKYQIQGLVLDVDETIVPIHHSQASPELAVWVEKI CCCCHHCCCCHHHCHHHHHHHHHHHHHHHHCEEEEECCCEEEEEECCCCCCHHHHHHHHH KSVASLWLVSNNLSQDRIGRIGDLLNIPYITAAGKPSRRKLKKAVDAMNLPVEKVAMVGD HHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHH RLFTDVLAGNRLGMFTILVEPISSNGLEFSNYKVRSFEVWVSQILGVSLNLTTHSLIYDH HHHHHHHCCCCCEEEEEEEEECCCCCEECCCEEEHHHHHHHHHHHCCEEECEEHEEEECC KNDFM CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]