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The map label for this gene is 113477745

Identifier: 113477745

GI number: 113477745

Start: 6692391

End: 6692939

Strand: Reverse

Name: 113477745

Synonym: Tery_4341

Alternate gene names: NA

Gene position: 6692939-6692391 (Counterclockwise)

Preceding gene: 113477746

Following gene: 113477742

Centisome position: 86.36

GC content: 30.05

Gene sequence:

>549_bases
ATGAATCATAAATATTTACAACAATTTGTCTGGATTATGGTAATATTTTTGAGTAGTTGTAATTATCAAAAATCAATCCA
AAGTTTTTCAGAAATGCAAGACAATTTATACCCAAAAAAAAATTATATTTCCAGTACAAATCTAGCAGCATCACAAAATA
TTAAAGAGTTAGAAAAAAACACATTTACCCTGATAAATCAATATCGACAATCTAAAAATTTACCGGCATTACAGTGGAAT
AATGATATTGTTCAACAATCAAGAATTCATGCTCAACAAATGGCTAGTGGAAAAACAACTTTTAGCCATGATGGTTTTAA
AAAAAGAGTAGAAATAATTAGTCAAAAAATTCCTTACAAGGGTGCTGCTGAAAATATAGCTTCTAACCAAGGTTATAGTG
ACCCTGCAGAAGCAGCAGTGAAGGGTTGGATCAAAAGTCCTGGTCATCATAAAAATATAGTGGGGGACTATAATTTAACT
GCTATTGGTATTGCTCAAAATTCTCAAGGAATGTATTATTTCAATCAGCTTTTTATTAAAACTAGGTAG

Upstream 100 bases:

>100_bases
ATTTCTATCAGAAAAGGGTTTGAGGAGTTCCTGAAATGGATAGCTTCAAAAAGCAGAGAGACTTAAAAAGATTAGTAATG
GTATGGAATAGGTTAAAATC

Downstream 100 bases:

>100_bases
AAAAGAGAGGTACACCCACGGGGGCGAGATGCTCACGGCGGCAATGTACCTACACAATGTACCCAAACTATGTGATTTTT
AATATTTACTTTGTGTATTA

Product: allergen V5/Tpx-1-like protein

Products: NA

Alternate protein names: SCP-Like Extracellular Protein; Allergen V5/Tpx-1 Family Protein; Allergen V5/Tpx-1 Related Protein; Allergen V5/Tpx-1 ; Domains; Allergen V5/Tpx-1-Like Protein

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MNHKYLQQFVWIMVIFLSSCNYQKSIQSFSEMQDNLYPKKNYISSTNLAASQNIKELEKNTFTLINQYRQSKNLPALQWN
NDIVQQSRIHAQQMASGKTTFSHDGFKKRVEIISQKIPYKGAAENIASNQGYSDPAEAAVKGWIKSPGHHKNIVGDYNLT
AIGIAQNSQGMYYFNQLFIKTR

Sequences:

>Translated_182_residues
MNHKYLQQFVWIMVIFLSSCNYQKSIQSFSEMQDNLYPKKNYISSTNLAASQNIKELEKNTFTLINQYRQSKNLPALQWN
NDIVQQSRIHAQQMASGKTTFSHDGFKKRVEIISQKIPYKGAAENIASNQGYSDPAEAAVKGWIKSPGHHKNIVGDYNLT
AIGIAQNSQGMYYFNQLFIKTR
>Mature_182_residues
MNHKYLQQFVWIMVIFLSSCNYQKSIQSFSEMQDNLYPKKNYISSTNLAASQNIKELEKNTFTLINQYRQSKNLPALQWN
NDIVQQSRIHAQQMASGKTTFSHDGFKKRVEIISQKIPYKGAAENIASNQGYSDPAEAAVKGWIKSPGHHKNIVGDYNLT
AIGIAQNSQGMYYFNQLFIKTR

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20864; Mature: 20864

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHKYLQQFVWIMVIFLSSCNYQKSIQSFSEMQDNLYPKKNYISSTNLAASQNIKELEKN
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHH
TFTLINQYRQSKNLPALQWNNDIVQQSRIHAQQMASGKTTFSHDGFKKRVEIISQKIPYK
HHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
GAAENIASNQGYSDPAEAAVKGWIKSPGHHKNIVGDYNLTAIGIAQNSQGMYYFNQLFIK
CCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEE
TR
CC
>Mature Secondary Structure
MNHKYLQQFVWIMVIFLSSCNYQKSIQSFSEMQDNLYPKKNYISSTNLAASQNIKELEKN
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHHHH
TFTLINQYRQSKNLPALQWNNDIVQQSRIHAQQMASGKTTFSHDGFKKRVEIISQKIPYK
HHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
GAAENIASNQGYSDPAEAAVKGWIKSPGHHKNIVGDYNLTAIGIAQNSQGMYYFNQLFIK
CCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEE
TR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA