| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is pkn1 [H]
Identifier: 113477711
GI number: 113477711
Start: 6633517
End: 6636105
Strand: Reverse
Name: pkn1 [H]
Synonym: Tery_4304
Alternate gene names: 113477711
Gene position: 6636105-6633517 (Counterclockwise)
Preceding gene: 113477713
Following gene: 113477707
Centisome position: 85.63
GC content: 35.61
Gene sequence:
>2589_bases ATGAAATCTCCCAATAATAATCAACAACAAAAAATTGAAAAACTAATCAAAACTTTAGGTATAGACCTAGAATTTACCGG AAGAGAAATAGCCGAAATATTATGGTTATCATTAAAACGCCAAGAACTAATACCAACCAAAAAATCAACCAAAACCCAAA CAAACATTGATAATCAAAATAAGAAAAAACCAAACATCCATCCCAACTCACCCCCCCATACCCCTAAAAAAATAACATCA ACCCCACATCCTAAAACTCCCCAAAAAACAACCCTTATTTATTTAGACATTAGAGATAACACCAAACAAAAAATAGACAC TCAAAAAAACTTACCCTTAAGAATACCCGACGCCCCCTCAATACCAAAACCATTAGAATTCGCTAAAGCATTACAACCTC TAATGCAAAAAGTAAACTCCCCAAAAAAAACAACCTTAGACGAAATAGAAACCGTAAACCAAACAGCCAAAAGCGGTATT TGTATTCCAATATTAAAATCAGAACCCGAACCTTGGTTAGACCTAGTTTTAGTCATAGACAAATATAAATCAATGACTTT ATGGCAACACACCATCAAAGAATTAAAACAACTCCTCAAAAATTATGGCATCTTTCGAGAAGTAAAAATATGCCGACTAT ACCCTCAAGAATTAGCAGCAATTCAAAAACAAAAATACACTCAAAAAAATCAAAAAAACTCAGATAAAATTTTACTAACA GCAGGAATAGGAAAACAAAAAACTTTCCCTAAAACTCAAGAATTAATAGACAGAACAGGTCGTCGTTTAATATTAATAGT AAGTGATTGTATTGCACCCTTTTGGCATGACGGTTCAATACTATCAACCTTACGAGAATGGGGAGAATACCAACCATTAG CAATTTTACAAATGTTACCAGACTGGATGTGGAGAAGAACAGGTTTAAGAATAGGATCCTCAGTTCAACTACAAAATTTA GTACCAGGAAATAGCAACAAAAACTTGATTATTAAAGAATTTTTGTTATGGAGAAATCTCTTATTAGAACAAGGAATAAA AATTCCCATATTAACTCTCCAACCAGAACTAGCAAAAGTTTGGAGTCAAATGTTAATAGGTAAACCCGAAGCATTAGTAT CAGGCTTTCTTTTGCCAAATGAACTTCACCTAAAATCTGAAAATTTACCAGAAAATAAAATTGAAAAATTAAACCCAGAA AAAAGAGTTCATCGTTTTAGAATGAACGCTTCTCCTATAGCCAGAAAATTAGCAAGCTTATTATCTGCCGCACCAATGAT ATGCCTTCCCGTAGTCAGAATAATTCAAGCAAAACTTTTATCACAAGCTTTACCTATTCATACAGCCGAAGTATTTTTAG GAGGTTTATTAAAGCCAACCCAAGAAATTACTCCTGACACAAACTCAGAATTAGTAGAATATAAATTTGTAGACGAAAAA ATTAGAAATATCTTATTAAAAAGTGCTCCAGTCAGTGATTCTCAAAAAGTTTTTGATGCAGTTTCTCAATATTTAAAAGA GCATTTTGGGAAGTCAATGAAAGAATTTGTAGCCTTATTAAAACTACCTACAAATACGGAAGAAACTGTGCCAGCTTTTG CCGAAATTGGATTTAATATCTTAAAAGAACTAGGGGGAGACTATACAGCTTTTGTTGAAAACTTAGAAACAGGTGGAATA TTTTTTCCCTCAGATATCGAGGTTTTTAAGTATGAGTATAAAACTCCCAAAGTCAACCAAAAAGGAGAAATTATTAAGGA AGATATTAACTCTGCCCGATACTTTAAAGAAAGTCTTCGAGAAAAGGTAGAGCTAGAAATGGTTTATATTCCTGGTGGTA CTTTTACCATGGGTTCTCCTGAAAATGAAGAGGATAGCGAAGATGATGAACGGCCCCAACATCAGGTAACTGTTCCTTCC TTTTTTATGGGCAAATATCCAGTAACTCAAGGACAGTGGAAAGCGATCGCCACTCGAACAGACATAAAAGTAGAACGAGA CCTAGACCCAGAGCCATCATATTTTAAACCATACGAAAGTATAGATAGATGGCAGAGACCAGTGGAGCAGGTAAACTGGA ACCAAGCAGTAGAATTTTGTAAAAGACTATCAAAACTAACAGGAAGAAAGTACAGGTTACCCAGTGAAGCCGAATGGGAA TATGCTTGTCGTGCAGGAACGAGTACACCATTCTACTTTGGAGAAACCATAACACCTGAGTTAGCTAACTATAATGGCAA CGATACTTACGGCGACGGGCCAAAAGGAGAAGATAGAAACCAAACAACTCCTGTAGGTAAATTTCCACCAAATGCTTTTG GTTTATATGATATGCACGGAAACGTTTATGAATGGTGTGCTGACGACAGGTATAATAATTATGTAGGAGCTCCTACAGAT GGAAGTGCTAGAATCAACAGTAATAAAAATAGTAATAAAAATAGTATAAAAGTACTTCGTGGCGGCTCCTGGATCATCTA TCCTTGGAGGTGTCGCTCTGCGTCCCGCTCCTACTGTATCTCGGACGAGGCGGACAACTTCTATATTGGTTTTCGTCTTG TGAGTTTCCCCCCCAGGACTTTTGAATAG
Upstream 100 bases:
>100_bases TAAATACTCCTGAAACCAAACAAACTGCTCACCTAAACCAAACTTAAAATTATTTCACTATTATTCCACTATTTAATTAT CCTACCCCTTATTCTTTCTT
Downstream 100 bases:
>100_bases CCCTTTGCCCTCTTGCCCTCTTGCCCTCTTGTTCTTTACTTCCCGCTCCGCGGGAAAAATTTTTTAGAACTAAATGTCAA ATGTCTTAAATCTGAGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 862; Mature: 862
Protein sequence:
>862_residues MKSPNNNQQQKIEKLIKTLGIDLEFTGREIAEILWLSLKRQELIPTKKSTKTQTNIDNQNKKKPNIHPNSPPHTPKKITS TPHPKTPQKTTLIYLDIRDNTKQKIDTQKNLPLRIPDAPSIPKPLEFAKALQPLMQKVNSPKKTTLDEIETVNQTAKSGI CIPILKSEPEPWLDLVLVIDKYKSMTLWQHTIKELKQLLKNYGIFREVKICRLYPQELAAIQKQKYTQKNQKNSDKILLT AGIGKQKTFPKTQELIDRTGRRLILIVSDCIAPFWHDGSILSTLREWGEYQPLAILQMLPDWMWRRTGLRIGSSVQLQNL VPGNSNKNLIIKEFLLWRNLLLEQGIKIPILTLQPELAKVWSQMLIGKPEALVSGFLLPNELHLKSENLPENKIEKLNPE KRVHRFRMNASPIARKLASLLSAAPMICLPVVRIIQAKLLSQALPIHTAEVFLGGLLKPTQEITPDTNSELVEYKFVDEK IRNILLKSAPVSDSQKVFDAVSQYLKEHFGKSMKEFVALLKLPTNTEETVPAFAEIGFNILKELGGDYTAFVENLETGGI FFPSDIEVFKYEYKTPKVNQKGEIIKEDINSARYFKESLREKVELEMVYIPGGTFTMGSPENEEDSEDDERPQHQVTVPS FFMGKYPVTQGQWKAIATRTDIKVERDLDPEPSYFKPYESIDRWQRPVEQVNWNQAVEFCKRLSKLTGRKYRLPSEAEWE YACRAGTSTPFYFGETITPELANYNGNDTYGDGPKGEDRNQTTPVGKFPPNAFGLYDMHGNVYEWCADDRYNNYVGAPTD GSARINSNKNSNKNSIKVLRGGSWIIYPWRCRSASRSYCISDEADNFYIGFRLVSFPPRTFE
Sequences:
>Translated_862_residues MKSPNNNQQQKIEKLIKTLGIDLEFTGREIAEILWLSLKRQELIPTKKSTKTQTNIDNQNKKKPNIHPNSPPHTPKKITS TPHPKTPQKTTLIYLDIRDNTKQKIDTQKNLPLRIPDAPSIPKPLEFAKALQPLMQKVNSPKKTTLDEIETVNQTAKSGI CIPILKSEPEPWLDLVLVIDKYKSMTLWQHTIKELKQLLKNYGIFREVKICRLYPQELAAIQKQKYTQKNQKNSDKILLT AGIGKQKTFPKTQELIDRTGRRLILIVSDCIAPFWHDGSILSTLREWGEYQPLAILQMLPDWMWRRTGLRIGSSVQLQNL VPGNSNKNLIIKEFLLWRNLLLEQGIKIPILTLQPELAKVWSQMLIGKPEALVSGFLLPNELHLKSENLPENKIEKLNPE KRVHRFRMNASPIARKLASLLSAAPMICLPVVRIIQAKLLSQALPIHTAEVFLGGLLKPTQEITPDTNSELVEYKFVDEK IRNILLKSAPVSDSQKVFDAVSQYLKEHFGKSMKEFVALLKLPTNTEETVPAFAEIGFNILKELGGDYTAFVENLETGGI FFPSDIEVFKYEYKTPKVNQKGEIIKEDINSARYFKESLREKVELEMVYIPGGTFTMGSPENEEDSEDDERPQHQVTVPS FFMGKYPVTQGQWKAIATRTDIKVERDLDPEPSYFKPYESIDRWQRPVEQVNWNQAVEFCKRLSKLTGRKYRLPSEAEWE YACRAGTSTPFYFGETITPELANYNGNDTYGDGPKGEDRNQTTPVGKFPPNAFGLYDMHGNVYEWCADDRYNNYVGAPTD GSARINSNKNSNKNSIKVLRGGSWIIYPWRCRSASRSYCISDEADNFYIGFRLVSFPPRTFE >Mature_862_residues MKSPNNNQQQKIEKLIKTLGIDLEFTGREIAEILWLSLKRQELIPTKKSTKTQTNIDNQNKKKPNIHPNSPPHTPKKITS TPHPKTPQKTTLIYLDIRDNTKQKIDTQKNLPLRIPDAPSIPKPLEFAKALQPLMQKVNSPKKTTLDEIETVNQTAKSGI CIPILKSEPEPWLDLVLVIDKYKSMTLWQHTIKELKQLLKNYGIFREVKICRLYPQELAAIQKQKYTQKNQKNSDKILLT AGIGKQKTFPKTQELIDRTGRRLILIVSDCIAPFWHDGSILSTLREWGEYQPLAILQMLPDWMWRRTGLRIGSSVQLQNL VPGNSNKNLIIKEFLLWRNLLLEQGIKIPILTLQPELAKVWSQMLIGKPEALVSGFLLPNELHLKSENLPENKIEKLNPE KRVHRFRMNASPIARKLASLLSAAPMICLPVVRIIQAKLLSQALPIHTAEVFLGGLLKPTQEITPDTNSELVEYKFVDEK IRNILLKSAPVSDSQKVFDAVSQYLKEHFGKSMKEFVALLKLPTNTEETVPAFAEIGFNILKELGGDYTAFVENLETGGI FFPSDIEVFKYEYKTPKVNQKGEIIKEDINSARYFKESLREKVELEMVYIPGGTFTMGSPENEEDSEDDERPQHQVTVPS FFMGKYPVTQGQWKAIATRTDIKVERDLDPEPSYFKPYESIDRWQRPVEQVNWNQAVEFCKRLSKLTGRKYRLPSEAEWE YACRAGTSTPFYFGETITPELANYNGNDTYGDGPKGEDRNQTTPVGKFPPNAFGLYDMHGNVYEWCADDRYNNYVGAPTD GSARINSNKNSNKNSIKVLRGGSWIIYPWRCRSASRSYCISDEADNFYIGFRLVSFPPRTFE
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI257470975, Length=274, Percent_Identity=32.1167883211679, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI38202250, Length=299, Percent_Identity=29.0969899665552, Blast_Score=98, Evalue=4e-20, Organism=Homo sapiens, GI257470977, Length=229, Percent_Identity=30.5676855895196, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI194248087, Length=279, Percent_Identity=30.8243727598566, Blast_Score=88, Evalue=4e-17, Organism=Homo sapiens, GI194248088, Length=294, Percent_Identity=29.5918367346939, Blast_Score=84, Evalue=8e-16, Organism=Homo sapiens, GI226437577, Length=148, Percent_Identity=36.4864864864865, Blast_Score=73, Evalue=1e-12, Organism=Drosophila melanogaster, GI20130397, Length=339, Percent_Identity=27.7286135693215, Blast_Score=88, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 98677; Mature: 98677
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSPNNNQQQKIEKLIKTLGIDLEFTGREIAEILWLSLKRQELIPTKKSTKTQTNIDNQN CCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC KKKPNIHPNSPPHTPKKITSTPHPKTPQKTTLIYLDIRDNTKQKIDTQKNLPLRIPDAPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHCCCCCCCEECCCCCC IPKPLEFAKALQPLMQKVNSPKKTTLDEIETVNQTAKSGICIPILKSEPEPWLDLVLVID CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH KYKSMTLWQHTIKELKQLLKNYGIFREVKICRLYPQELAAIQKQKYTQKNQKNSDKILLT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEE AGIGKQKTFPKTQELIDRTGRRLILIVSDCIAPFWHDGSILSTLREWGEYQPLAILQMLP ECCCCCCCCCHHHHHHHHCCCEEEEEEHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH DWMWRRTGLRIGSSVQLQNLVPGNSNKNLIIKEFLLWRNLLLEQGIKIPILTLQPELAKV HHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH WSQMLIGKPEALVSGFLLPNELHLKSENLPENKIEKLNPEKRVHRFRMNASPIARKLASL HHHHHCCCCHHHHHCCCCCCCEECCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHH LSAAPMICLPVVRIIQAKLLSQALPIHTAEVFLGGLLKPTQEITPDTNSELVEYKFVDEK HHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCCCCCCEEHHHHHHH IRNILLKSAPVSDSQKVFDAVSQYLKEHFGKSMKEFVALLKLPTNTEETVPAFAEIGFNI HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LKELGGDYTAFVENLETGGIFFPSDIEVFKYEYKTPKVNQKGEIIKEDINSARYFKESLR HHHHCCCHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH EKVELEMVYIPGGTFTMGSPENEEDSEDDERPQHQVTVPSFFMGKYPVTQGQWKAIATRT HCEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCEEEEEEC DIKVERDLDPEPSYFKPYESIDRWQRPVEQVNWNQAVEFCKRLSKLTGRKYRLPSEAEWE CEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCCH YACRAGTSTPFYFGETITPELANYNGNDTYGDGPKGEDRNQTTPVGKFPPNAFGLYDMHG HHHHCCCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC NVYEWCADDRYNNYVGAPTDGSARINSNKNSNKNSIKVLRGGSWIIYPWRCRSASRSYCI CHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCEEEEEEEECCCCCCEEE SDEADNFYIGFRLVSFPPRTFE CCCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MKSPNNNQQQKIEKLIKTLGIDLEFTGREIAEILWLSLKRQELIPTKKSTKTQTNIDNQN CCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC KKKPNIHPNSPPHTPKKITSTPHPKTPQKTTLIYLDIRDNTKQKIDTQKNLPLRIPDAPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHCCCCCCCEECCCCCC IPKPLEFAKALQPLMQKVNSPKKTTLDEIETVNQTAKSGICIPILKSEPEPWLDLVLVID CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHH KYKSMTLWQHTIKELKQLLKNYGIFREVKICRLYPQELAAIQKQKYTQKNQKNSDKILLT HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEE AGIGKQKTFPKTQELIDRTGRRLILIVSDCIAPFWHDGSILSTLREWGEYQPLAILQMLP ECCCCCCCCCHHHHHHHHCCCEEEEEEHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH DWMWRRTGLRIGSSVQLQNLVPGNSNKNLIIKEFLLWRNLLLEQGIKIPILTLQPELAKV HHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHH WSQMLIGKPEALVSGFLLPNELHLKSENLPENKIEKLNPEKRVHRFRMNASPIARKLASL HHHHHCCCCHHHHHCCCCCCCEECCCCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHH LSAAPMICLPVVRIIQAKLLSQALPIHTAEVFLGGLLKPTQEITPDTNSELVEYKFVDEK HHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCCCCCCEEHHHHHHH IRNILLKSAPVSDSQKVFDAVSQYLKEHFGKSMKEFVALLKLPTNTEETVPAFAEIGFNI HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LKELGGDYTAFVENLETGGIFFPSDIEVFKYEYKTPKVNQKGEIIKEDINSARYFKESLR HHHHCCCHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH EKVELEMVYIPGGTFTMGSPENEEDSEDDERPQHQVTVPSFFMGKYPVTQGQWKAIATRT HCEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCEEEEEEC DIKVERDLDPEPSYFKPYESIDRWQRPVEQVNWNQAVEFCKRLSKLTGRKYRLPSEAEWE CEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCCH YACRAGTSTPFYFGETITPELANYNGNDTYGDGPKGEDRNQTTPVGKFPPNAFGLYDMHG HHHHCCCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC NVYEWCADDRYNNYVGAPTDGSARINSNKNSNKNSIKVLRGGSWIIYPWRCRSASRSYCI CHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCEEEEEEEECCCCCCEEE SDEADNFYIGFRLVSFPPRTFE CCCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]