| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477616
Identifier: 113477616
GI number: 113477616
Start: 6480895
End: 6481350
Strand: Reverse
Name: 113477616
Synonym: Tery_4202
Alternate gene names: NA
Gene position: 6481350-6480895 (Counterclockwise)
Preceding gene: 113477618
Following gene: 113477615
Centisome position: 83.63
GC content: 29.61
Gene sequence:
>456_bases GTGAGAGATGGTTACATTACAACCTATAATATAGATCTGAAATCAGATGGTATAATAGTAAGTTTAAGACAAAGAGTATC AGAAGATATTACTACAAGAAACCCAACAGTTATTCTTGGAAATGTCAATGTTATTATTGATGACGATGTTGGAGATAGCC TGAGCGCAGGAGAGCAAACAGTTATTGGTGGAGATGTTGATGTTACTATAACTAACTTTATTCATAATGATAGAGTGAAT CAAAATCTAGATACTACCTTAGTAATTCCTAATCAGAATGTACTTAATAATCAGCTACTTAATCAAGAAATTTCCTTAAA TAATAACAATAACAATATTGAGGATAATTCCACTATAAGTCTCTCAGGTAAGACAAATATTTTATCAAACCTTATCCGGT CTAAAAGATCTAAATTAATTTCAAGTTATACACCTAGTAAAACTTACAAAACTTAA
Upstream 100 bases:
>100_bases GCCATTGATACGGCTTCTGTTTGGTTGAGCTTGATAGTCATGTTTTTGAGAATTAATAATTAACAATTATACCAAGGGTG ATAAATTTTCGTTTGTAGAC
Downstream 100 bases:
>100_bases TCGGTAAAATTAGGCTATAATACTTTTTAAAAAAAGATTTTACCTCAAAACTTTTATTAGATGAGATAAACAACCCCTAA CACCATGCCTCACTGCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRDGYITTYNIDLKSDGIIVSLRQRVSEDITTRNPTVILGNVNVIIDDDVGDSLSAGEQTVIGGDVDVTITNFIHNDRVN QNLDTTLVIPNQNVLNNQLLNQEISLNNNNNNIEDNSTISLSGKTNILSNLIRSKRSKLISSYTPSKTYKT
Sequences:
>Translated_151_residues MRDGYITTYNIDLKSDGIIVSLRQRVSEDITTRNPTVILGNVNVIIDDDVGDSLSAGEQTVIGGDVDVTITNFIHNDRVN QNLDTTLVIPNQNVLNNQLLNQEISLNNNNNNIEDNSTISLSGKTNILSNLIRSKRSKLISSYTPSKTYKT >Mature_151_residues MRDGYITTYNIDLKSDGIIVSLRQRVSEDITTRNPTVILGNVNVIIDDDVGDSLSAGEQTVIGGDVDVTITNFIHNDRVN QNLDTTLVIPNQNVLNNQLLNQEISLNNNNNNIEDNSTISLSGKTNILSNLIRSKRSKLISSYTPSKTYKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16693; Mature: 16693
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDGYITTYNIDLKSDGIIVSLRQRVSEDITTRNPTVILGNVNVIIDDDVGDSLSAGEQT CCCCEEEEEEEEECCCCEEEEEHHHHHHCCCCCCCEEEEECEEEEEECCCCCCCCCCCEE VIGGDVDVTITNFIHNDRVNQNLDTTLVIPNQNVLNNQLLNQEISLNNNNNNIEDNSTIS EECCCEEEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHCCCEEEECCCCCCCCCCCEEE LSGKTNILSNLIRSKRSKLISSYTPSKTYKT ECCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRDGYITTYNIDLKSDGIIVSLRQRVSEDITTRNPTVILGNVNVIIDDDVGDSLSAGEQT CCCCEEEEEEEEECCCCEEEEEHHHHHHCCCCCCCEEEEECEEEEEECCCCCCCCCCCEE VIGGDVDVTITNFIHNDRVNQNLDTTLVIPNQNVLNNQLLNQEISLNNNNNNIEDNSTIS EECCCEEEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHCCCEEEECCCCCCCCCCCEEE LSGKTNILSNLIRSKRSKLISSYTPSKTYKT ECCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA