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The map label for this gene is cobU [H]

Identifier: 113476937

GI number: 113476937

Start: 5250688

End: 5251251

Strand: Reverse

Name: cobU [H]

Synonym: Tery_3432

Alternate gene names: 113476937

Gene position: 5251251-5250688 (Counterclockwise)

Preceding gene: 113476941

Following gene: 113476936

Centisome position: 67.76

GC content: 33.87

Gene sequence:

>564_bases
ATGAATTTTTCTACAGCTAATTCTGATAAGTTAATTTTAGTTACTGGCCCTGCTCGTTCTGGTAAAAGTGAGTGGGCAGA
AAGTTTAGCCACTAATTCTGGAAAAAAAGTAATATATATAGCTACTTCTCAAATTAATGCTAGTGATTTAGAATGGCAAG
CTCGAATTAAACAACATAAAAATCGTCGTCCTTCTGACTGGATAATTTTAGAAATACCTGTAAAATTATCAGAAGCTTTG
ATTAATTATAGCGATGAAGATTCTTGTATTTTGGTAGATTCTTTAGGTACTTGGTTAGCTAATATTTTGGCACAGGATGA
ACAGACTTGGAATGAAACTTTAGAAACAGTAATTGAATGTTTATTAAAAGTTAAGGGTAATGTCATTTTAGTCGCTGAAG
AAACAGGTTGGGGAGTTGTTCCTTCTTTTCCTTCTGGACGTTTGTTTCGCGATCGCCTTGGTAGTCTTATTCGTCGGTTA
GGAGTTATTTCTGACTCTGTTTATCTAGTTACTGCAGGTTACATTTTGCCTCTAAGTGATTTAGGAATACCTTTAAAACT
TTAA

Upstream 100 bases:

>100_bases
AGATTAAGACCATAGTTTAGTTATGATTTTTTGAATATCGACATAATTGCTTTTCCTAAATTTATTATCCTTCCTAGTTG
AACATTTAGTTTTATTCTCC

Downstream 100 bases:

>100_bases
TTTCATCTTGTAATTCTTAATAAATTCTCAATAACTAAATGCTTCAACTTTATACTACACTTAAATTATGCACAATGTAT
TAATTCTAATAAAATTAGAT

Product: adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase

Products: NA

Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNFSTANSDKLILVTGPARSGKSEWAESLATNSGKKVIYIATSQINASDLEWQARIKQHKNRRPSDWIILEIPVKLSEAL
INYSDEDSCILVDSLGTWLANILAQDEQTWNETLETVIECLLKVKGNVILVAEETGWGVVPSFPSGRLFRDRLGSLIRRL
GVISDSVYLVTAGYILPLSDLGIPLKL

Sequences:

>Translated_187_residues
MNFSTANSDKLILVTGPARSGKSEWAESLATNSGKKVIYIATSQINASDLEWQARIKQHKNRRPSDWIILEIPVKLSEAL
INYSDEDSCILVDSLGTWLANILAQDEQTWNETLETVIECLLKVKGNVILVAEETGWGVVPSFPSGRLFRDRLGSLIRRL
GVISDSVYLVTAGYILPLSDLGIPLKL
>Mature_187_residues
MNFSTANSDKLILVTGPARSGKSEWAESLATNSGKKVIYIATSQINASDLEWQARIKQHKNRRPSDWIILEIPVKLSEAL
INYSDEDSCILVDSLGTWLANILAQDEQTWNETLETVIECLLKVKGNVILVAEETGWGVVPSFPSGRLFRDRLGSLIRRL
GVISDSVYLVTAGYILPLSDLGIPLKL

Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]

COG id: COG2087

COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788302, Length=177, Percent_Identity=34.4632768361582, Blast_Score=90, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003203 [H]

Pfam domain/function: PF02283 CobU [H]

EC number: =2.7.1.156; =2.7.7.62 [H]

Molecular weight: Translated: 20684; Mature: 20684

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSTANSDKLILVTGPARSGKSEWAESLATNSGKKVIYIATSQINASDLEWQARIKQHK
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHC
NRRPSDWIILEIPVKLSEALINYSDEDSCILVDSLGTWLANILAQDEQTWNETLETVIEC
CCCCCCEEEEEECHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLKVKGNVILVAEETGWGVVPSFPSGRLFRDRLGSLIRRLGVISDSVYLVTAGYILPLSD
HHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECEEEEHHH
LGIPLKL
CCCEECC
>Mature Secondary Structure
MNFSTANSDKLILVTGPARSGKSEWAESLATNSGKKVIYIATSQINASDLEWQARIKQHK
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHC
NRRPSDWIILEIPVKLSEALINYSDEDSCILVDSLGTWLANILAQDEQTWNETLETVIEC
CCCCCCEEEEEECHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHH
LLKVKGNVILVAEETGWGVVPSFPSGRLFRDRLGSLIRRLGVISDSVYLVTAGYILPLSD
HHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECEEEEHHH
LGIPLKL
CCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]